RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 SAMM50Q9Y512 469 aa26.51■■□□□ 1.83
SHD-201ENST00000543264 EIF3HO15372 352 aaKnown RBP eCLIP26.5■■□□□ 1.83
SHD-201ENST00000543264 BCAMP50895 628 aa26.5■■□□□ 1.83
SHD-201ENST00000543264 ADAMTS3O15072 1205 aa26.5■■□□□ 1.83
SHD-201ENST00000543264 CREG2Q8IUH2 290 aa26.5■■□□□ 1.83
SHD-201ENST00000543264 RASSF8Q8NHQ8 419 aa26.5■■□□□ 1.83
SHD-201ENST00000543264 TBC1D8BQ0IIM8 1120 aa26.49■■□□□ 1.83
SHD-201ENST00000543264 MCTP2Q6DN12 878 aa26.49■■□□□ 1.83
SHD-201ENST00000543264 TUBGCP2Q9BSJ2 902 aa26.49■■□□□ 1.83
SHD-201ENST00000543264 THAP9Q9H5L6 903 aa26.49■■□□□ 1.83
SHD-201ENST00000543264 EXOC1Q9NV70 894 aa26.49■■□□□ 1.83
SHD-201ENST00000543264 LRWD1Q9UFC0 647 aa26.49■■□□□ 1.83
SHD-201ENST00000543264 MROH5Q6ZUA9 1318 aa26.49■■□□□ 1.83
SHD-201ENST00000543264 RASSF10A6NK89 507 aa26.49■■□□□ 1.83
SHD-201ENST00000543264 PDE8AO60658 829 aa26.49■■□□□ 1.83
SHD-201ENST00000543264 SRGNP10124 158 aa26.49■■□□□ 1.83
SHD-201ENST00000543264 FBXW10Q5XX13 1052 aa26.49■■□□□ 1.83
SHD-201ENST00000543264 KRT26Q7Z3Y9 468 aa26.49■■□□□ 1.83
SHD-201ENST00000543264 CCDC170Q8IYT3 715 aa26.49■■□□□ 1.83
SHD-201ENST00000543264 PLIN2Q99541 437 aa26.49■■□□□ 1.83
SHD-201ENST00000543264 RBM28Q9NW13 759 aaKnown RBP26.49■■□□□ 1.83
SHD-201ENST00000543264 GRIN2DO15399 1336 aa26.48■■□□□ 1.83
SHD-201ENST00000543264 CYP2D7A0A087X1C5 515 aa26.48■■□□□ 1.83
SHD-201ENST00000543264 GOLGA8KD6RF30 607 aa26.48■■□□□ 1.83
SHD-201ENST00000543264 CYP7A1P22680 504 aa26.48■■□□□ 1.83
SHD-201ENST00000543264 CCDC96Q2M329 555 aa26.48■■□□□ 1.83
SHD-201ENST00000543264 MMGT1Q8N4V1 131 aa26.48■■□□□ 1.83
SHD-201ENST00000543264 SNX12Q9UMY4 172 aa26.48■■□□□ 1.83
SHD-201ENST00000543264 MYH2Q9UKX2 1941 aa26.48■■□□□ 1.83
SHD-201ENST00000543264 LOC102724159A0A0B4J2E5 919 aa26.48■■□□□ 1.83
SHD-201ENST00000543264 TROAPQ12815 778 aa26.48■■□□□ 1.83
SHD-201ENST00000543264 PWP2Q15269 919 aaKnown RBP26.48■■□□□ 1.83
SHD-201ENST00000543264 FKBP15Q5T1M5 1219 aa26.48■■□□□ 1.83
SHD-201ENST00000543264 GBP6Q6ZN66 633 aa26.48■■□□□ 1.83
SHD-201ENST00000543264 PSMB7Q99436 277 aa26.48■■□□□ 1.83
SHD-201ENST00000543264 TTYH3Q9C0H2 523 aa26.48■■□□□ 1.83
SHD-201ENST00000543264 VEGFAP15692 232 aaPredicted RBP26.47■■□□□ 1.83
SHD-201ENST00000543264 INPP5BP32019 993 aa26.47■■□□□ 1.83
SHD-201ENST00000543264 ARL8AQ96BM9 186 aa26.47■■□□□ 1.83
SHD-201ENST00000543264 PURBQ96QR8 312 aaKnown RBP26.47■■□□□ 1.83
SHD-201ENST00000543264 NCAPGQ9BPX3 1015 aa26.47■■□□□ 1.83
SHD-201ENST00000543264 PSMA7O14818 248 aa26.47■■□□□ 1.83
SHD-201ENST00000543264 OPA1O60313 960 aa26.47■■□□□ 1.83
SHD-201ENST00000543264 ZBED6P86452 979 aa26.47■■□□□ 1.83
SHD-201ENST00000543264 ADGRA1Q86SQ6 560 aa26.47■■□□□ 1.83
SHD-201ENST00000543264 SRBD1Q8N5C6 995 aaKnown RBP26.47■■□□□ 1.83
SHD-201ENST00000543264 IQSEC3Q9UPP2 1182 aaPredicted RBP26.47■■□□□ 1.83
SHD-201ENST00000543264 VAV2P52735 878 aa26.46■■□□□ 1.83
SHD-201ENST00000543264 SPA17Q15506 151 aa26.46■■□□□ 1.83
SHD-201ENST00000543264 TMTC3Q6ZXV5 915 aa26.46■■□□□ 1.83
SHD-201ENST00000543264 CSGALNACT2Q8N6G5 542 aa26.46■■□□□ 1.83
SHD-201ENST00000543264 GPATCH11Q8N954 259 aa26.46■■□□□ 1.83
SHD-201ENST00000543264 SPATA4Q8NEY3 305 aa26.46■■□□□ 1.83
SHD-201ENST00000543264 CCDC42Q96M95 316 aa26.46■■□□□ 1.83
SHD-201ENST00000543264 NUP58Q9BVL2 599 aa26.46■■□□□ 1.83
SHD-201ENST00000543264 SMARCAL1Q9NZC9 954 aa26.46■■□□□ 1.83
SHD-201ENST00000543264 ASAP1Q9ULH1 1129 aa26.46■■□□□ 1.83
SHD-201ENST00000543264 NUTM2BA6NNL0 878 aaPredicted RBP26.46■■□□□ 1.83
SHD-201ENST00000543264 NUTM2EB1AL46 878 aaPredicted RBP26.46■■□□□ 1.83
SHD-201ENST00000543264 ZNF263O14978 683 aa26.46■■□□□ 1.83
SHD-201ENST00000543264 HNRNPH1P31943 449 aaKnown RBP26.46■■□□□ 1.83
SHD-201ENST00000543264 FNBP4Q8N3X1 1017 aaPredicted RBP26.46■■□□□ 1.83
SHD-201ENST00000543264 TSEN2Q8NCE0 465 aaKnown RBP26.46■■□□□ 1.83
SHD-201ENST00000543264 RUFY1Q96T51 708 aa26.46■■□□□ 1.83
SHD-201ENST00000543264 SH3GL2Q99962 352 aa26.46■■□□□ 1.83
SHD-201ENST00000543264 DISP2A7MBM2 1401 aa26.45■■□□□ 1.83
SHD-201ENST00000543264 PP2D1A8MPX8 630 aa26.45■■□□□ 1.82
SHD-201ENST00000543264 PLEKP08567 350 aaPredicted RBP26.45■■□□□ 1.82
SHD-201ENST00000543264 CXCR5P32302 372 aa26.45■■□□□ 1.82
SHD-201ENST00000543264 LONP1P36776 959 aaKnown RBP26.45■■□□□ 1.82
SHD-201ENST00000543264 NKX1-1Q15270 411 aaPredicted RBP26.45■■□□□ 1.82
SHD-201ENST00000543264 MLXIPQ9HAP2 919 aa26.45■■□□□ 1.82
SHD-201ENST00000543264 DISC1Q9NRI5 854 aa26.45■■□□□ 1.82
SHD-201ENST00000543264 TMOD3Q9NYL9 352 aa26.45■■□□□ 1.82
SHD-201ENST00000543264 CAPN6Q9Y6Q1 641 aa26.45■■□□□ 1.82
SHD-201ENST00000543264 TRAPPC10P48553 1259 aa26.45■■□□□ 1.82
SHD-201ENST00000543264 MNAT1P51948 309 aa26.45■■□□□ 1.82
SHD-201ENST00000543264 IQCA1Q86XH1 822 aa26.45■■□□□ 1.82
SHD-201ENST00000543264 TRIM58Q8NG06 486 aa26.45■■□□□ 1.82
SHD-201ENST00000543264 MYCBPQ99417 103 aaPredicted RBP26.45■■□□□ 1.82
SHD-201ENST00000543264 TACC1O75410 805 aa26.44■■□□□ 1.82
SHD-201ENST00000543264 STARD3NLO95772 234 aa26.44■■□□□ 1.82
SHD-201ENST00000543264 NAALADL2Q58DX5 795 aa26.44■■□□□ 1.82
SHD-201ENST00000543264 TTI2Q6NXR4 508 aa26.44■■□□□ 1.82
SHD-201ENST00000543264 ABCF2Q9UG63 623 aa26.44■■□□□ 1.82
SHD-201ENST00000543264 CNTNAP5Q8WYK1 1306 aa26.44■■□□□ 1.82
SHD-201ENST00000543264 MOCS3O95396 460 aa26.44■■□□□ 1.82
SHD-201ENST00000543264 TTMPQ5BVD1 217 aa26.44■■□□□ 1.82
SHD-201ENST00000543264 EHD2Q9NZN4 543 aa26.44■■□□□ 1.82
SHD-201ENST00000543264 ADAMTSL3P82987 1691 aa26.43■■□□□ 1.82
SHD-201ENST00000543264 MYH10P35580 1976 aa26.43■■□□□ 1.82
SHD-201ENST00000543264 PDCLQ13371 301 aa26.43■■□□□ 1.82
SHD-201ENST00000543264 CEP89Q96ST8 783 aa26.43■■□□□ 1.82
SHD-201ENST00000543264 DUSP9Q99956 384 aaKnown RBP26.43■■□□□ 1.82
SHD-201ENST00000543264 TSGA10Q9BZW7 698 aa26.43■■□□□ 1.82
SHD-201ENST00000543264 KLRC4O43908 158 aa26.43■■□□□ 1.82
SHD-201ENST00000543264 USO1O60763 962 aaKnown RBP26.43■■□□□ 1.82
SHD-201ENST00000543264 HSF2BPO75031 334 aa26.43■■□□□ 1.82
SHD-201ENST00000543264 CALM1P0DP23 149 aa26.43■■□□□ 1.82
SHD-201ENST00000543264 CALM2P0DP24 149 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms