RNA–Protein interactions for RNA: ENST00000543134.5

SEC23IP-208, Transcript of SEC23 interacting protein, humanhuman

TSL 5 BASIC

Gene SEC23IP, Length 1,461 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23IP-208ENST00000543134 SWAP70Q9UH65 585 aa8.4□□□□□ -1.06
SEC23IP-208ENST00000543134 PITPNM2Q9BZ72 1349 aa8.4□□□□□ -1.06
SEC23IP-208ENST00000543134 ATRNL1Q5VV63 1379 aa8.4□□□□□ -1.06
SEC23IP-208ENST00000543134 H3BQV1 296 aa8.39□□□□□ -1.07
SEC23IP-208ENST00000543134 VAMP1P23763 118 aa8.39□□□□□ -1.07
SEC23IP-208ENST00000543134 RPS12P25398 132 aaKnown RBP8.39□□□□□ -1.07
SEC23IP-208ENST00000543134 SHMT1P34896 483 aa8.39□□□□□ -1.07
SEC23IP-208ENST00000543134 SSRP1Q08945 709 aaKnown RBP8.39□□□□□ -1.07
SEC23IP-208ENST00000543134 SLC4A8Q2Y0W8 1093 aa8.39□□□□□ -1.07
SEC23IP-208ENST00000543134 CFAP100Q494V2 611 aa8.39□□□□□ -1.07
SEC23IP-208ENST00000543134 FKBP1CQ5VVH2 108 aa8.39□□□□□ -1.07
SEC23IP-208ENST00000543134 MYSM1Q5VVJ2 828 aa8.39□□□□□ -1.07
SEC23IP-208ENST00000543134 ATL3Q6DD88 541 aa8.39□□□□□ -1.07
SEC23IP-208ENST00000543134 SH3BP5LQ7L8J4 393 aa8.39□□□□□ -1.07
SEC23IP-208ENST00000543134 FOXP4Q8IVH2 680 aaPredicted RBP8.39□□□□□ -1.07
SEC23IP-208ENST00000543134 CCDC144CPQ8IYA2 1237 aa8.39□□□□□ -1.07
SEC23IP-208ENST00000543134 PHKBQ93100 1093 aa8.39□□□□□ -1.07
SEC23IP-208ENST00000543134 RNF26Q9BY78 433 aaPredicted RBP8.39□□□□□ -1.07
SEC23IP-208ENST00000543134 GPCPD1Q9NPB8 672 aa8.39□□□□□ -1.07
SEC23IP-208ENST00000543134 RBM28Q9NW13 759 aaKnown RBP8.39□□□□□ -1.07
SEC23IP-208ENST00000543134 GGA3Q9NZ52 723 aa8.39□□□□□ -1.07
SEC23IP-208ENST00000543134 SERPINB13Q9UIV8 391 aa8.39□□□□□ -1.07
SEC23IP-208ENST00000543134 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.39□□□□□ -1.07
SEC23IP-208ENST00000543134 CNPY2Q9Y2B0 182 aa8.39□□□□□ -1.07
SEC23IP-208ENST00000543134 ELP1O95163 1332 aa8.39□□□□□ -1.07
SEC23IP-208ENST00000543134 SHTN1A0MZ66 631 aa8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 PRPF3O43395 683 aaKnown RBP8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 TSPY3P0CV98 308 aa8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 TSPY8P0CW00 308 aa8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 NF2P35240 595 aa8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 TM4SF4P48230 202 aa8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 PICALMQ13492 652 aa8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 KIF4BQ2VIQ3 1234 aa8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 TATDN1Q6P1N9 297 aa8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 TMTC3Q6ZXV5 915 aa8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 OTOP1Q7RTM1 612 aa8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 NOP9Q86U38 636 aaKnown RBP8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 FERMT3Q86UX7 667 aa8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 GPT2Q8TD30 523 aa8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 ERO1AQ96HE7 468 aa8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 C8orf76Q96K31 380 aa8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 AIFM3Q96NN9 605 aa8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 ALG1Q9BT22 464 aa8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 TDRD3Q9H7E2 651 aaKnown RBP8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 PI4KBQ9UBF8 816 aa8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 COL6A3P12111 3177 aa8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 PALM3A6NDB9 673 aaPredicted RBP8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 DDTLA6NHG4 134 aaPredicted RBP8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 PPFIA3O75145 1194 aa8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 DEXIO95424 95 aa8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 U2AF2P26368 475 aaKnown RBP eCLIP8.38□□□□□ -1.072e-8■■■□□ 14.7
SEC23IP-208ENST00000543134 GUCY1A2P33402 732 aa8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 RBM5P52756 815 aaKnown RBP eCLIP8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 ZNF280AP59817 542 aaPredicted RBP8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 KRT85P78386 507 aa8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 MDM2Q00987 491 aaPredicted RBP8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 GRM4Q14833 912 aa8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 ARHGEF6Q15052 776 aa8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 PKN1Q16512 942 aa8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 FAM173BQ6P4H8 233 aa8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 SRBD1Q8N5C6 995 aaKnown RBP8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 PNMA1Q8ND90 353 aa8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 NUP133Q8WUM0 1156 aa8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 WASF1Q92558 559 aa8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 OTUD5Q96G74 571 aa8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 CCDC17Q96LX7 622 aa8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 TMEM47Q9BQJ4 181 aa8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 SCAND2PQ9GZW5 306 aaPredicted RBP8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 DNAJC18Q9H819 358 aa8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 GJB4Q9NTQ9 266 aa8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 MTMR4Q9NYA4 1195 aa8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 RCOR1Q9UKL0 485 aa8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 TMA7Q9Y2S6 64 aaKnown RBP8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 DDX49Q9Y6V7 483 aaKnown RBP8.38□□□□□ -1.07
SEC23IP-208ENST00000543134 UBE2Q2LH0YL09 131 aa8.37□□□□□ -1.07
SEC23IP-208ENST00000543134 GADD45BO75293 160 aaPredicted RBP8.37□□□□□ -1.07
SEC23IP-208ENST00000543134 PLEKHA8P1O95397 391 aa8.37□□□□□ -1.07
SEC23IP-208ENST00000543134 MBD3O95983 291 aa8.37□□□□□ -1.07
SEC23IP-208ENST00000543134 HLA-DOAP06340 250 aa8.37□□□□□ -1.07
SEC23IP-208ENST00000543134 TOP1P11387 765 aaKnown RBP8.37□□□□□ -1.07
SEC23IP-208ENST00000543134 AKR1B1P15121 316 aa8.37□□□□□ -1.07
SEC23IP-208ENST00000543134 SMARCA1P28370 1054 aa8.37□□□□□ -1.07
SEC23IP-208ENST00000543134 KIF5BP33176 963 aa8.37□□□□□ -1.07
SEC23IP-208ENST00000543134 CACNB3P54284 484 aa8.37□□□□□ -1.07
SEC23IP-208ENST00000543134 MAP3K10Q02779 954 aa8.37□□□□□ -1.07
SEC23IP-208ENST00000543134 DLGAP5Q15398 846 aa8.37□□□□□ -1.07
SEC23IP-208ENST00000543134 CSPP1Q1MSJ5 1256 aa8.37□□□□□ -1.07
SEC23IP-208ENST00000543134 FOXD4L6Q3SYB3 417 aaPredicted RBP8.37□□□□□ -1.07
SEC23IP-208ENST00000543134 KRT40Q6A162 431 aa8.37□□□□□ -1.07
SEC23IP-208ENST00000543134 OTUD7BQ6GQQ9 843 aa8.37□□□□□ -1.07
SEC23IP-208ENST00000543134 FOXD4L3Q6VB84 417 aaPredicted RBP8.37□□□□□ -1.07
SEC23IP-208ENST00000543134 BRAPQ7Z569 592 aa8.37□□□□□ -1.07
SEC23IP-208ENST00000543134 FAM83AQ86UY5 434 aa8.37□□□□□ -1.07
SEC23IP-208ENST00000543134 TRIM22Q8IYM9 498 aa8.37□□□□□ -1.07
SEC23IP-208ENST00000543134 CMTR1Q8N1G2 835 aaKnown RBP8.37□□□□□ -1.07
SEC23IP-208ENST00000543134 OGFOD1Q8N543 542 aa8.37□□□□□ -1.07
SEC23IP-208ENST00000543134 FAM151AQ8WW52 585 aa8.37□□□□□ -1.07
SEC23IP-208ENST00000543134 DPF3Q92784 378 aa8.37□□□□□ -1.07
SEC23IP-208ENST00000543134 ARMC5Q96C12 935 aa8.37□□□□□ -1.07
SEC23IP-208ENST00000543134 CEP95Q96GE4 821 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms