RNA–Protein interactions for RNA: ENST00000543082.5

TCF4-208, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-208ENST00000543082 NHEJ1Q9H9Q4 299 aaPredicted RBP10.84□□□□□ -0.67
TCF4-208ENST00000543082 COL22A1Q8NFW1 1626 aaPredicted RBP10.83□□□□□ -0.68
TCF4-208ENST00000543082 HMGB1P1B2RPK0 211 aaPredicted RBP10.83□□□□□ -0.68
TCF4-208ENST00000543082 XBP1P17861 261 aa10.83□□□□□ -0.68
TCF4-208ENST00000543082 MDH1P40925 334 aaKnown RBP10.83□□□□□ -0.68
TCF4-208ENST00000543082 CDK17Q00537 523 aa10.83□□□□□ -0.68
TCF4-208ENST00000543082 PAK2Q13177 524 aa10.83□□□□□ -0.68
TCF4-208ENST00000543082 IFT20Q8IY31 132 aa10.83□□□□□ -0.68
TCF4-208ENST00000543082 MREGQ8N565 214 aa10.83□□□□□ -0.68
TCF4-208ENST00000543082 CCDC155Q8N6L0 562 aa10.83□□□□□ -0.68
TCF4-208ENST00000543082 FAM212AQ96EL1 285 aa10.83□□□□□ -0.68
TCF4-208ENST00000543082 PUS3Q9BZE2 481 aaKnown RBP10.83□□□□□ -0.68
TCF4-208ENST00000543082 THAP9Q9H5L6 903 aa10.83□□□□□ -0.68
TCF4-208ENST00000543082 VPS54Q9P1Q0 977 aa10.83□□□□□ -0.68
TCF4-208ENST00000543082 GLI3P10071 1580 aa10.83□□□□□ -0.68
TCF4-208ENST00000543082 A0A1B0GUA9 196 aa10.83□□□□□ -0.68
TCF4-208ENST00000543082 PES1O00541 588 aaKnown RBP10.83□□□□□ -0.68
TCF4-208ENST00000543082 KIF3CO14782 793 aa10.83□□□□□ -0.68
TCF4-208ENST00000543082 PAFAH1B1P43034 410 aa10.83□□□□□ -0.68
TCF4-208ENST00000543082 ZBED6P86452 979 aa10.83□□□□□ -0.68
TCF4-208ENST00000543082 HDLBPQ00341 1268 aaKnown RBP10.83□□□□□ -0.68
TCF4-208ENST00000543082 GUCY1A3Q02108 690 aa10.83□□□□□ -0.68
TCF4-208ENST00000543082 IFT88Q13099 833 aa10.83□□□□□ -0.68
TCF4-208ENST00000543082 SPA17Q15506 151 aa10.83□□□□□ -0.68
TCF4-208ENST00000543082 ALX1Q15699 326 aa10.83□□□□□ -0.68
TCF4-208ENST00000543082 KCTD16Q68DU8 428 aa10.83□□□□□ -0.68
TCF4-208ENST00000543082 C6orf89Q6UWU4 347 aa10.83□□□□□ -0.68
TCF4-208ENST00000543082 PARP9Q8IXQ6 854 aa10.83□□□□□ -0.68
TCF4-208ENST00000543082 ARFGAP2Q8N6H7 521 aa10.83□□□□□ -0.68
TCF4-208ENST00000543082 CCDC114Q96M63 670 aa10.83□□□□□ -0.68
TCF4-208ENST00000543082 CCDC43Q96MW1 224 aaKnown RBP10.83□□□□□ -0.68
TCF4-208ENST00000543082 ALS2CR12Q96Q35 445 aa10.83□□□□□ -0.68
TCF4-208ENST00000543082 KRT23Q9C075 422 aa10.83□□□□□ -0.68
TCF4-208ENST00000543082 BLZF1Q9H2G9 400 aa10.83□□□□□ -0.68
TCF4-208ENST00000543082 CENPHQ9H3R5 247 aa10.83□□□□□ -0.68
TCF4-208ENST00000543082 MAGEC2Q9UBF1 373 aaPredicted RBP10.83□□□□□ -0.68
TCF4-208ENST00000543082 SOS2Q07890 1332 aaPredicted RBP10.83□□□□□ -0.68
TCF4-208ENST00000543082 NUTM2BA6NNL0 878 aaPredicted RBP10.82□□□□□ -0.68
TCF4-208ENST00000543082 NUTM2EB1AL46 878 aaPredicted RBP10.82□□□□□ -0.68
TCF4-208ENST00000543082 GCP02774 474 aa10.82□□□□□ -0.68
TCF4-208ENST00000543082 SLC8A1P32418 973 aa10.82□□□□□ -0.68
TCF4-208ENST00000543082 KRT2P35908 639 aa10.82□□□□□ -0.68
TCF4-208ENST00000543082 SLC7A5Q01650 507 aa10.82□□□□□ -0.68
TCF4-208ENST00000543082 IFFO1Q0D2I5 559 aa10.82□□□□□ -0.68
TCF4-208ENST00000543082 UBE3CQ15386 1083 aa10.82□□□□□ -0.68
TCF4-208ENST00000543082 PPP4R3AQ6IN85 833 aa10.82□□□□□ -0.68
TCF4-208ENST00000543082 PDXDC2PQ6P474 469 aa10.82□□□□□ -0.68
TCF4-208ENST00000543082 IQCKQ8N0W5 287 aa10.82□□□□□ -0.68
TCF4-208ENST00000543082 NOC3LQ8WTT2 800 aaKnown RBP10.82□□□□□ -0.68
TCF4-208ENST00000543082 ATP6V1G3Q96LB4 118 aa10.82□□□□□ -0.68
TCF4-208ENST00000543082 OSBPL9Q96SU4 736 aa10.82□□□□□ -0.68
TCF4-208ENST00000543082 TTYH3Q9C0H2 523 aa10.82□□□□□ -0.68
TCF4-208ENST00000543082 KRT14P02533 472 aa10.82□□□□□ -0.68
TCF4-208ENST00000543082 RPN1P04843 607 aaKnown RBP10.82□□□□□ -0.68
TCF4-208ENST00000543082 SRGNP10124 158 aa10.82□□□□□ -0.68
TCF4-208ENST00000543082 TRIM21P19474 475 aaKnown RBP10.82□□□□□ -0.68
TCF4-208ENST00000543082 PPARAQ07869 468 aa10.82□□□□□ -0.68
TCF4-208ENST00000543082 PPP2R5AQ15172 486 aa10.82□□□□□ -0.68
TCF4-208ENST00000543082 CCDC96Q2M329 555 aa10.82□□□□□ -0.68
TCF4-208ENST00000543082 CYB5D1Q6P9G0 228 aa10.82□□□□□ -0.68
TCF4-208ENST00000543082 TAX1BP1Q86VP1 789 aa10.82□□□□□ -0.68
TCF4-208ENST00000543082 IRF2BP1Q8IU81 584 aa10.82□□□□□ -0.68
TCF4-208ENST00000543082 IQCDQ96DY2 449 aa10.82□□□□□ -0.68
TCF4-208ENST00000543082 SGSM3Q96HU1 749 aa10.82□□□□□ -0.68
TCF4-208ENST00000543082 FAXDC2Q96IV6 333 aa10.82□□□□□ -0.68
TCF4-208ENST00000543082 HINFPQ9BQA5 517 aa10.82□□□□□ -0.68
TCF4-208ENST00000543082 SH2D4AQ9H788 454 aa10.82□□□□□ -0.68
TCF4-208ENST00000543082 ATP6V0A4Q9HBG4 840 aa10.82□□□□□ -0.68
TCF4-208ENST00000543082 EXOC1Q9NV70 894 aa10.82□□□□□ -0.68
TCF4-208ENST00000543082 ZSWIM5Q9P217 1185 aa10.82□□□□□ -0.68
TCF4-208ENST00000543082 ZNF233A6NK53 670 aa10.81□□□□□ -0.68
TCF4-208ENST00000543082 E7EVH7 732 aa10.81□□□□□ -0.68
TCF4-208ENST00000543082 MATR3P43243 847 aaKnown RBP eCLIP10.81□□□□□ -0.68
TCF4-208ENST00000543082 WTAPQ15007 396 aa10.81□□□□□ -0.68
TCF4-208ENST00000543082 STAMQ92783 540 aa10.81□□□□□ -0.68
TCF4-208ENST00000543082 CYFIP2Q96F07 1278 aa10.81□□□□□ -0.68
TCF4-208ENST00000543082 MTA3Q9BTC8 594 aa10.81□□□□□ -0.68
TCF4-208ENST00000543082 RNF26Q9BY78 433 aaPredicted RBP10.81□□□□□ -0.68
TCF4-208ENST00000543082 GDF3Q9NR23 364 aa10.81□□□□□ -0.68
TCF4-208ENST00000543082 LRWD1Q9UFC0 647 aa10.81□□□□□ -0.68
TCF4-208ENST00000543082 DUSP10Q9Y6W6 482 aa10.81□□□□□ -0.68
TCF4-208ENST00000543082 A0A1W2PQJ5 194 aa10.81□□□□□ -0.68
TCF4-208ENST00000543082 ERICH2A1L162 156 aa10.81□□□□□ -0.68
TCF4-208ENST00000543082 PRCPP42785 496 aa10.81□□□□□ -0.68
TCF4-208ENST00000543082 CCDC57Q2TAC2 916 aa10.81□□□□□ -0.68
TCF4-208ENST00000543082 PI16Q6UXB8 463 aa10.81□□□□□ -0.68
TCF4-208ENST00000543082 FUKQ8N0W3 1084 aa10.81□□□□□ -0.68
TCF4-208ENST00000543082 ADSSL1Q8N142 457 aa10.81□□□□□ -0.68
TCF4-208ENST00000543082 TMTC2Q8N394 836 aa10.81□□□□□ -0.68
TCF4-208ENST00000543082 P3H4Q92791 437 aa10.81□□□□□ -0.68
TCF4-208ENST00000543082 CCDC42Q96M95 316 aa10.81□□□□□ -0.68
TCF4-208ENST00000543082 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.81□□□□□ -0.68
TCF4-208ENST00000543082 DDX20Q9UHI6 824 aaKnown RBP10.81□□□□□ -0.68
TCF4-208ENST00000543082 CAPN6Q9Y6Q1 641 aa10.81□□□□□ -0.68
TCF4-208ENST00000543082 DOCK2Q92608 1830 aa10.8□□□□□ -0.68
TCF4-208ENST00000543082 FAM205CA6NFA0 338 aa10.8□□□□□ -0.68
TCF4-208ENST00000543082 A1BGP04217 495 aa10.8□□□□□ -0.68
TCF4-208ENST00000543082 CLNS1AP54105 237 aaKnown RBP10.8□□□□□ -0.68
TCF4-208ENST00000543082 IRX1P78414 480 aaPredicted RBP10.8□□□□□ -0.68
TCF4-208ENST00000543082 ATP2C1P98194 919 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms