RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 USP5P45974 858 aa18.67■□□□□ 0.58
KDM2B-216ENST00000543025 UBXN1Q04323 297 aa18.67■□□□□ 0.58
KDM2B-216ENST00000543025 WWC2Q6AWC2 1192 aa18.67■□□□□ 0.58
KDM2B-216ENST00000543025 CELF1Q92879 486 aaKnown RBP18.67■□□□□ 0.58
KDM2B-216ENST00000543025 DISC1Q9NRI5 854 aa18.67■□□□□ 0.58
KDM2B-216ENST00000543025 TAF1P21675 1872 aa18.67■□□□□ 0.58
KDM2B-216ENST00000543025 WHAMMP3Q1A5X7 153 aa18.66■□□□□ 0.58
KDM2B-216ENST00000543025 TPTE2Q6XPS3 522 aa18.66■□□□□ 0.58
KDM2B-216ENST00000543025 KAT14Q9H8E8 782 aa18.66■□□□□ 0.58
KDM2B-216ENST00000543025 ZCCHC17Q9NP64 241 aaKnown RBP18.66■□□□□ 0.58
KDM2B-216ENST00000543025 PCDHA4Q9UN74 947 aa18.66■□□□□ 0.58
KDM2B-216ENST00000543025 ERLIN1O75477 346 aa18.66■□□□□ 0.58
KDM2B-216ENST00000543025 ABL1P00519 1130 aa18.66■□□□□ 0.58
KDM2B-216ENST00000543025 GTF2E1P29083 439 aaPredicted RBP18.66■□□□□ 0.58
KDM2B-216ENST00000543025 ARHGAP25P42331 645 aa18.66■□□□□ 0.58
KDM2B-216ENST00000543025 GPS2Q13227 327 aa18.66■□□□□ 0.58
KDM2B-216ENST00000543025 RCSD1Q6JBY9 416 aa18.66■□□□□ 0.58
KDM2B-216ENST00000543025 TMED8Q6PL24 325 aaPredicted RBP18.66■□□□□ 0.58
KDM2B-216ENST00000543025 CCDC24Q8N4L8 307 aa18.66■□□□□ 0.58
KDM2B-216ENST00000543025 MAPK8IP1Q9UQF2 711 aa18.66■□□□□ 0.58
KDM2B-216ENST00000543025 KIAA1551Q9HCM1 1747 aa18.65■□□□□ 0.58
KDM2B-216ENST00000543025 SERPINB2P05120 415 aa18.65■□□□□ 0.58
KDM2B-216ENST00000543025 CYP2D6P10635 497 aa18.65■□□□□ 0.58
KDM2B-216ENST00000543025 BEND6Q5SZJ8 279 aaPredicted RBP18.65■□□□□ 0.58
KDM2B-216ENST00000543025 FAM205AQ6ZU69 1335 aa18.65■□□□□ 0.58
KDM2B-216ENST00000543025 CTAGE15A4D2H0 777 aa18.65■□□□□ 0.58
KDM2B-216ENST00000543025 PARP1P09874 1014 aaKnown RBP18.65■□□□□ 0.58
KDM2B-216ENST00000543025 CTAGE8P0CG41 777 aa18.65■□□□□ 0.58
KDM2B-216ENST00000543025 PRDX5P30044 214 aa18.65■□□□□ 0.58
KDM2B-216ENST00000543025 CTAGE6Q86UF2 777 aa18.65■□□□□ 0.58
KDM2B-216ENST00000543025 CTAGE4Q8IX94 777 aa18.65■□□□□ 0.58
KDM2B-216ENST00000543025 ADSSL1Q8N142 457 aa18.65■□□□□ 0.58
KDM2B-216ENST00000543025 TXLNBQ8N3L3 684 aa18.65■□□□□ 0.58
KDM2B-216ENST00000543025 CNBD1Q8NA66 436 aa18.65■□□□□ 0.58
KDM2B-216ENST00000543025 SLF1Q9BQI6 1058 aa18.65■□□□□ 0.58
KDM2B-216ENST00000543025 KLRK1P26718 216 aa18.64■□□□□ 0.57
KDM2B-216ENST00000543025 HIBADHP31937 336 aaKnown RBP18.64■□□□□ 0.57
KDM2B-216ENST00000543025 PRR5LQ6MZQ0 368 aa18.64■□□□□ 0.57
KDM2B-216ENST00000543025 DTHD1Q6ZMT9 781 aa18.64■□□□□ 0.57
KDM2B-216ENST00000543025 PNKPQ96T60 521 aa18.64■□□□□ 0.57
KDM2B-216ENST00000543025 BAZ2BQ9UIF8 2168 aaKnown RBP18.64■□□□□ 0.57
KDM2B-216ENST00000543025 NDUFA10O95299 355 aa18.64■□□□□ 0.57
KDM2B-216ENST00000543025 MYL1P05976 194 aa18.64■□□□□ 0.57
KDM2B-216ENST00000543025 MMP10P09238 476 aa18.64■□□□□ 0.57
KDM2B-216ENST00000543025 ST5P78524 1137 aa18.64■□□□□ 0.57
KDM2B-216ENST00000543025 KCNB1Q14721 858 aa18.64■□□□□ 0.57
KDM2B-216ENST00000543025 SLC10A5Q5PT55 438 aa18.64■□□□□ 0.57
KDM2B-216ENST00000543025 HDXQ7Z353 690 aa18.64■□□□□ 0.57
KDM2B-216ENST00000543025 GPKOWQ92917 476 aaPredicted RBP eCLIP18.64■□□□□ 0.57
KDM2B-216ENST00000543025 CCDC194A0A1B0GVG4 234 aa18.63■□□□□ 0.57
KDM2B-216ENST00000543025 A0A1W2PQC6 194 aa18.63■□□□□ 0.57
KDM2B-216ENST00000543025 TRIM49BA6NDI0 452 aa18.63■□□□□ 0.57
KDM2B-216ENST00000543025 EEF1GP26641 437 aaKnown RBP18.63■□□□□ 0.57
KDM2B-216ENST00000543025 NT5C2P49902 561 aa18.63■□□□□ 0.57
KDM2B-216ENST00000543025 DGKHQ86XP1 1220 aa18.63■□□□□ 0.57
KDM2B-216ENST00000543025 IRF2BP1Q8IU81 584 aa18.63■□□□□ 0.57
KDM2B-216ENST00000543025 RASSF8Q8NHQ8 419 aa18.63■□□□□ 0.57
KDM2B-216ENST00000543025 MCM9Q9NXL9 1143 aa18.63■□□□□ 0.57
KDM2B-216ENST00000543025 EPN1Q9Y6I3 576 aaPredicted RBP18.63■□□□□ 0.57
KDM2B-216ENST00000543025 MAST2Q6P0Q8 1798 aa18.63■□□□□ 0.57
KDM2B-216ENST00000543025 STIM1Q13586 685 aa18.63■□□□□ 0.57
KDM2B-216ENST00000543025 NAALADL2Q58DX5 795 aa18.63■□□□□ 0.57
KDM2B-216ENST00000543025 MSL3Q8N5Y2 521 aaKnown RBP18.63■□□□□ 0.57
KDM2B-216ENST00000543025 ANKRD31Q8N7Z5 1873 aa18.63■□□□□ 0.57
KDM2B-216ENST00000543025 MB21D1Q8N884 522 aa18.63■□□□□ 0.57
KDM2B-216ENST00000543025 PNMA1Q8ND90 353 aa18.63■□□□□ 0.57
KDM2B-216ENST00000543025 OR8K1Q8NGG5 319 aa18.63■□□□□ 0.57
KDM2B-216ENST00000543025 CHP1Q99653 195 aa18.63■□□□□ 0.57
KDM2B-216ENST00000543025 TTC26A0AVF1 554 aa18.62■□□□□ 0.57
KDM2B-216ENST00000543025 LGALS16A8MUM7 142 aa18.62■□□□□ 0.57
KDM2B-216ENST00000543025 M0R2N6 131 aa18.62■□□□□ 0.57
KDM2B-216ENST00000543025 TUBBP07437 444 aa18.62■□□□□ 0.57
KDM2B-216ENST00000543025 SEMA3FQ13275 785 aa18.62■□□□□ 0.57
KDM2B-216ENST00000543025 R3HDM1Q15032 1099 aaKnown RBP18.62■□□□□ 0.57
KDM2B-216ENST00000543025 RASGRP4Q8TDF6 673 aa18.62■□□□□ 0.57
KDM2B-216ENST00000543025 THAP9Q9H5L6 903 aa18.62■□□□□ 0.57
KDM2B-216ENST00000543025 MYO6Q9UM54 1294 aa18.62■□□□□ 0.57
KDM2B-216ENST00000543025 RPS8P62241 208 aaKnown RBP18.62■□□□□ 0.57
KDM2B-216ENST00000543025 AMPD2Q01433 879 aa18.62■□□□□ 0.57
KDM2B-216ENST00000543025 TFAP4Q01664 338 aa18.62■□□□□ 0.57
KDM2B-216ENST00000543025 NEK11Q8NG66 645 aa18.62■□□□□ 0.57
KDM2B-216ENST00000543025 GBP3Q9H0R5 595 aa18.62■□□□□ 0.57
KDM2B-216ENST00000543025 LUC7L2Q9Y383 392 aaKnown RBP18.62■□□□□ 0.57
KDM2B-216ENST00000543025 TFRCP02786 760 aaKnown RBP18.61■□□□□ 0.57
KDM2B-216ENST00000543025 RHOXF2BP0C7M4 288 aa18.61■□□□□ 0.57
KDM2B-216ENST00000543025 UBA7P41226 1012 aa18.61■□□□□ 0.57
KDM2B-216ENST00000543025 GNAQP50148 359 aa18.61■□□□□ 0.57
KDM2B-216ENST00000543025 HNRNPH2P55795 449 aaKnown RBP18.61■□□□□ 0.57
KDM2B-216ENST00000543025 STAG2Q8N3U4 1231 aa18.61■□□□□ 0.57
KDM2B-216ENST00000543025 CCDC148Q8NFR7 591 aa18.61■□□□□ 0.57
KDM2B-216ENST00000543025 DNAJC7Q99615 494 aa18.61■□□□□ 0.57
KDM2B-216ENST00000543025 RHOXF2Q9BQY4 288 aa18.61■□□□□ 0.57
KDM2B-216ENST00000543025 HAUS4Q9H6D7 363 aa18.61■□□□□ 0.57
KDM2B-216ENST00000543025 L1RE1Q9UN81 338 aa18.61■□□□□ 0.57
KDM2B-216ENST00000543025 H3BQF6 201 aa18.61■□□□□ 0.57
KDM2B-216ENST00000543025 PSMA7O14818 248 aa18.61■□□□□ 0.57
KDM2B-216ENST00000543025 EIF3JO75822 258 aaKnown RBP18.61■□□□□ 0.57
KDM2B-216ENST00000543025 RHOBTB3O94955 611 aa18.61■□□□□ 0.57
KDM2B-216ENST00000543025 PMS1P54277 932 aaKnown RBP18.61■□□□□ 0.57
KDM2B-216ENST00000543025 MCM6Q14566 821 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms