RNA–Protein interactions for RNA: ENST00000542930.1

C2CD3-219, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 524 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-219ENST00000542930 GRIN2DO15399 1336 aa11.37□□□□□ -0.59
C2CD3-219ENST00000542930 BRWD1Q9NSI6 2320 aa11.37□□□□□ -0.59
C2CD3-219ENST00000542930 KIF28PB7ZC32 967 aa11.37□□□□□ -0.59
C2CD3-219ENST00000542930 LPXNO60711 386 aa11.37□□□□□ -0.59
C2CD3-219ENST00000542930 ACTN1P12814 892 aa11.37□□□□□ -0.59
C2CD3-219ENST00000542930 AKR1B1P15121 316 aa11.37□□□□□ -0.59
C2CD3-219ENST00000542930 SNRNP48Q6IEG0 339 aaKnown RBP11.37□□□□□ -0.59
C2CD3-219ENST00000542930 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.37□□□□□ -0.59
C2CD3-219ENST00000542930 ARMCX2Q7L311 632 aa11.37□□□□□ -0.59
C2CD3-219ENST00000542930 CCDC17Q96LX7 622 aa11.37□□□□□ -0.59
C2CD3-219ENST00000542930 CRNKL1Q9BZJ0 848 aaKnown RBP11.37□□□□□ -0.59
C2CD3-219ENST00000542930 RIPK3Q9Y572 518 aa11.37□□□□□ -0.59
C2CD3-219ENST00000542930 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.36□□□□□ -0.59
C2CD3-219ENST00000542930 MAGEB6P1A0A0J9YX57 407 aa11.36□□□□□ -0.59
C2CD3-219ENST00000542930 ARHGEF15O94989 841 aa11.36□□□□□ -0.59
C2CD3-219ENST00000542930 GNAI2P04899 355 aa11.36□□□□□ -0.59
C2CD3-219ENST00000542930 EEF2P13639 858 aaKnown RBP11.36□□□□□ -0.59
C2CD3-219ENST00000542930 SSTR3P32745 418 aaPredicted RBP11.36□□□□□ -0.59
C2CD3-219ENST00000542930 TNFAIP2Q03169 654 aa11.36□□□□□ -0.59
C2CD3-219ENST00000542930 SLFN5Q08AF3 891 aa11.36□□□□□ -0.59
C2CD3-219ENST00000542930 LEXMQ3ZCV2 418 aa11.36□□□□□ -0.59
C2CD3-219ENST00000542930 HERC6Q8IVU3 1022 aa11.36□□□□□ -0.59
C2CD3-219ENST00000542930 CCDC144CPQ8IYA2 1237 aa11.36□□□□□ -0.59
C2CD3-219ENST00000542930 FGD4Q96M96 766 aa11.36□□□□□ -0.59
C2CD3-219ENST00000542930 KATNBL1Q9H079 304 aa11.36□□□□□ -0.59
C2CD3-219ENST00000542930 UBE2ZQ9H832 354 aaPredicted RBP11.36□□□□□ -0.59
C2CD3-219ENST00000542930 GOPCQ9HD26 462 aa11.36□□□□□ -0.59
C2CD3-219ENST00000542930 DBNLQ9UJU6 430 aaKnown RBP11.36□□□□□ -0.59
C2CD3-219ENST00000542930 ASTN1O14525 1302 aa11.35□□□□□ -0.59
C2CD3-219ENST00000542930 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.35□□□□□ -0.59
C2CD3-219ENST00000542930 ATP2A1O14983 1001 aa11.35□□□□□ -0.59
C2CD3-219ENST00000542930 ZEB2O60315 1214 aa11.35□□□□□ -0.59
C2CD3-219ENST00000542930 SUPT20HL2P0C7V6 817 aa11.35□□□□□ -0.59
C2CD3-219ENST00000542930 FSCN1Q16658 493 aaKnown RBP11.35□□□□□ -0.59
C2CD3-219ENST00000542930 FAM83BQ5T0W9 1011 aa11.35□□□□□ -0.59
C2CD3-219ENST00000542930 NOL8Q76FK4 1167 aaKnown RBP11.35□□□□□ -0.59
C2CD3-219ENST00000542930 DEFB128Q7Z7B8 93 aa11.35□□□□□ -0.59
C2CD3-219ENST00000542930 TLK2Q86UE8 772 aa11.35□□□□□ -0.59
C2CD3-219ENST00000542930 FAM9BQ8IZU0 186 aa11.35□□□□□ -0.59
C2CD3-219ENST00000542930 ANKRD35Q8N283 1001 aa11.35□□□□□ -0.59
C2CD3-219ENST00000542930 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.35□□□□□ -0.59
C2CD3-219ENST00000542930 DYNLL2Q96FJ2 89 aa11.35□□□□□ -0.59
C2CD3-219ENST00000542930 ALDH8A1Q9H2A2 487 aaPredicted RBP11.35□□□□□ -0.59
C2CD3-219ENST00000542930 ANTXR1Q9H6X2 564 aa11.35□□□□□ -0.59
C2CD3-219ENST00000542930 KANSL2Q9H9L4 492 aa11.35□□□□□ -0.59
C2CD3-219ENST00000542930 DCP1AQ9NPI6 582 aaPredicted RBP11.35□□□□□ -0.59
C2CD3-219ENST00000542930 GNEQ9Y223 722 aaKnown RBP11.35□□□□□ -0.59
C2CD3-219ENST00000542930 NAV1Q8NEY1 1877 aa11.34□□□□□ -0.59
C2CD3-219ENST00000542930 POTEB3A0JP26 581 aa11.34□□□□□ -0.59
C2CD3-219ENST00000542930 DCXO43602 365 aa11.34□□□□□ -0.59
C2CD3-219ENST00000542930 CT47B1P0C2W7 299 aaPredicted RBP11.34□□□□□ -0.59
C2CD3-219ENST00000542930 CYP2D6P10635 497 aa11.34□□□□□ -0.59
C2CD3-219ENST00000542930 RFC2P35250 354 aa11.34□□□□□ -0.59
C2CD3-219ENST00000542930 OS9Q13438 667 aaPredicted RBP11.34□□□□□ -0.59
C2CD3-219ENST00000542930 POTEBQ6S5H4 581 aa11.34□□□□□ -0.59
C2CD3-219ENST00000542930 SDR42E1Q8WUS8 393 aa11.34□□□□□ -0.59
C2CD3-219ENST00000542930 ARHGAP45Q92619 1136 aa11.34□□□□□ -0.59
C2CD3-219ENST00000542930 SLF1Q9BQI6 1058 aa11.34□□□□□ -0.59
C2CD3-219ENST00000542930 AP5M1Q9H0R1 490 aa11.34□□□□□ -0.59
C2CD3-219ENST00000542930 TLR7Q9NYK1 1049 aaKnown RBP11.34□□□□□ -0.59
C2CD3-219ENST00000542930 FBXO40Q9UH90 709 aa11.34□□□□□ -0.59
C2CD3-219ENST00000542930 RAD21O60216 631 aa11.33□□□□□ -0.6
C2CD3-219ENST00000542930 CYP2C9P11712 490 aa11.33□□□□□ -0.6
C2CD3-219ENST00000542930 IL9P15248 144 aa11.33□□□□□ -0.6
C2CD3-219ENST00000542930 SLC4A3P48751 1232 aa11.33□□□□□ -0.6
C2CD3-219ENST00000542930 PSMC6P62333 389 aa11.33□□□□□ -0.6
C2CD3-219ENST00000542930 PRPF38AQ8NAV1 312 aaKnown RBP11.33□□□□□ -0.6
C2CD3-219ENST00000542930 CHST13Q8NET6 341 aa11.33□□□□□ -0.6
C2CD3-219ENST00000542930 CCDC8Q9H0W5 538 aaPredicted RBP11.33□□□□□ -0.6
C2CD3-219ENST00000542930 Q9Y3F1 56 aa11.33□□□□□ -0.6
C2CD3-219ENST00000542930 ZNF536O15090 1300 aa11.33□□□□□ -0.6
C2CD3-219ENST00000542930 MCM3APO60318 1980 aa11.32□□□□□ -0.6
C2CD3-219ENST00000542930 CACNA1AO00555 2505 aa11.32□□□□□ -0.6
C2CD3-219ENST00000542930 C5orf42Q9H799 3197 aa11.32□□□□□ -0.6
C2CD3-219ENST00000542930 GRXCR2A6NFK2 248 aa11.32□□□□□ -0.6
C2CD3-219ENST00000542930 DYNC1LI2O43237 492 aaPredicted RBP11.32□□□□□ -0.6
C2CD3-219ENST00000542930 ST18O60284 1047 aa11.32□□□□□ -0.6
C2CD3-219ENST00000542930 ZBED4O75132 1171 aa11.32□□□□□ -0.6
C2CD3-219ENST00000542930 BAIAP3O94812 1187 aa11.32□□□□□ -0.6
C2CD3-219ENST00000542930 KCNA5P22460 613 aa11.32□□□□□ -0.6
C2CD3-219ENST00000542930 CDK8P49336 464 aa11.32□□□□□ -0.6
C2CD3-219ENST00000542930 POLA2Q14181 598 aa11.32□□□□□ -0.6
C2CD3-219ENST00000542930 PUS10Q3MIT2 529 aaKnown RBP11.32□□□□□ -0.6
C2CD3-219ENST00000542930 SLC9C2Q5TAH2 1124 aa11.32□□□□□ -0.6
C2CD3-219ENST00000542930 PTCRAQ6ISU1 281 aaPredicted RBP11.32□□□□□ -0.6
C2CD3-219ENST00000542930 SPRED2Q7Z698 418 aa11.32□□□□□ -0.6
C2CD3-219ENST00000542930 CPXCR1Q8N123 301 aa11.32□□□□□ -0.6
C2CD3-219ENST00000542930 GDPD5Q8WTR4 605 aa11.32□□□□□ -0.6
C2CD3-219ENST00000542930 TRMT13Q9NUP7 481 aaKnown RBP11.32□□□□□ -0.6
C2CD3-219ENST00000542930 TNKSO95271 1327 aa11.32□□□□□ -0.6
C2CD3-219ENST00000542930 ASB14A6NK59 587 aa11.31□□□□□ -0.6
C2CD3-219ENST00000542930 PITPNM1O00562 1244 aa11.31□□□□□ -0.6
C2CD3-219ENST00000542930 SURF6O75683 361 aaKnown RBP11.31□□□□□ -0.6
C2CD3-219ENST00000542930 IQCF3P0C7M6 154 aa11.31□□□□□ -0.6
C2CD3-219ENST00000542930 SMPD1P17405 629 aa11.31□□□□□ -0.6
C2CD3-219ENST00000542930 FOXK2Q01167 660 aa11.31□□□□□ -0.6
C2CD3-219ENST00000542930 CNTN2Q02246 1040 aa11.31□□□□□ -0.6
C2CD3-219ENST00000542930 TTF1Q15361 905 aaPredicted RBP11.31□□□□□ -0.6
C2CD3-219ENST00000542930 C16orf86Q6ZW13 317 aa11.31□□□□□ -0.6
C2CD3-219ENST00000542930 FAM133AQ8N9E0 248 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms