RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 DGKHQ86XP1 1220 aa20.53■□□□□ 0.88
LTBR-210ENST00000542830 HOMER2Q9NSB8 354 aa20.53■□□□□ 0.88
LTBR-210ENST00000542830 ALPK3Q96L96 1907 aa20.53■□□□□ 0.88
LTBR-210ENST00000542830 KBTBD13C9JR72 458 aa20.52■□□□□ 0.88
LTBR-210ENST00000542830 RARBP10826 455 aa20.52■□□□□ 0.88
LTBR-210ENST00000542830 PDHBP11177 359 aa20.52■□□□□ 0.88
LTBR-210ENST00000542830 CCDC174Q6PII3 467 aa20.52■□□□□ 0.88
LTBR-210ENST00000542830 RASGRP2Q7LDG7 609 aa20.52■□□□□ 0.88
LTBR-210ENST00000542830 AGBL1Q96MI9 1066 aa20.52■□□□□ 0.88
LTBR-210ENST00000542830 KRT23Q9C075 422 aa20.52■□□□□ 0.88
LTBR-210ENST00000542830 SENP6Q9GZR1 1112 aaPredicted RBP20.52■□□□□ 0.88
LTBR-210ENST00000542830 CNNM2Q9H8M5 875 aa20.52■□□□□ 0.88
LTBR-210ENST00000542830 RNF146Q9NTX7 359 aa20.52■□□□□ 0.88
LTBR-210ENST00000542830 PNMA2Q9UL42 364 aa20.52■□□□□ 0.88
LTBR-210ENST00000542830 KDM4AO75164 1064 aa20.51■□□□□ 0.87
LTBR-210ENST00000542830 ZNF865P0CJ78 1059 aaPredicted RBP20.51■□□□□ 0.87
LTBR-210ENST00000542830 ALAS1P13196 640 aa20.51■□□□□ 0.87
LTBR-210ENST00000542830 AKR1A1P14550 325 aa20.51■□□□□ 0.87
LTBR-210ENST00000542830 SYDE2Q5VT97 1194 aa20.51■□□□□ 0.87
LTBR-210ENST00000542830 ANO1Q5XXA6 986 aa20.51■□□□□ 0.87
LTBR-210ENST00000542830 TRERF1Q96PN7 1200 aa20.51■□□□□ 0.87
LTBR-210ENST00000542830 RANBP17Q9H2T7 1088 aaKnown RBP20.51■□□□□ 0.87
LTBR-210ENST00000542830 B4E1Z4 1266 aa20.5■□□□□ 0.87
LTBR-210ENST00000542830 POTEB2H3BUK9 544 aa20.5■□□□□ 0.87
LTBR-210ENST00000542830 ICAM1P05362 532 aa20.5■□□□□ 0.87
LTBR-210ENST00000542830 SNHG28P0DPA3 235 aa20.5■□□□□ 0.87
LTBR-210ENST00000542830 CHMLP26374 656 aa20.5■□□□□ 0.87
LTBR-210ENST00000542830 ZNF543Q08ER8 600 aa20.5■□□□□ 0.87
LTBR-210ENST00000542830 GJC2Q5T442 439 aaPredicted RBP20.5■□□□□ 0.87
LTBR-210ENST00000542830 TTBK2Q6IQ55 1244 aa20.5■□□□□ 0.87
LTBR-210ENST00000542830 ZKSCAN3Q9BRR0 538 aa20.5■□□□□ 0.87
LTBR-210ENST00000542830 IL25Q9H293 177 aa20.5■□□□□ 0.87
LTBR-210ENST00000542830 CCPG1Q9ULG6 757 aa20.5■□□□□ 0.87
LTBR-210ENST00000542830 FRMPD2Q68DX3 1309 aaPredicted RBP20.5■□□□□ 0.87
LTBR-210ENST00000542830 SNAI1O95863 264 aaPredicted RBP20.49■□□□□ 0.87
LTBR-210ENST00000542830 SLC16A2P36021 539 aa20.49■□□□□ 0.87
LTBR-210ENST00000542830 LRRC26Q2I0M4 334 aa20.49■□□□□ 0.87
LTBR-210ENST00000542830 GPATCH4Q5T3I0 446 aaKnown RBP20.49■□□□□ 0.87
LTBR-210ENST00000542830 ANKS1AQ92625 1134 aa20.49■□□□□ 0.87
LTBR-210ENST00000542830 ABHD16BQ9H3Z7 469 aa20.49■□□□□ 0.87
LTBR-210ENST00000542830 GPCPD1Q9NPB8 672 aa20.49■□□□□ 0.87
LTBR-210ENST00000542830 A1CFQ9NQ94 594 aaKnown RBP20.49■□□□□ 0.87
LTBR-210ENST00000542830 XPNPEP3Q9NQH7 507 aa20.49■□□□□ 0.87
LTBR-210ENST00000542830 RBM27Q9P2N5 1060 aaKnown RBP20.49■□□□□ 0.87
LTBR-210ENST00000542830 SMCHD1A6NHR9 2005 aa20.48■□□□□ 0.87
LTBR-210ENST00000542830 TRIOBPQ9H2D6 2365 aa20.48■□□□□ 0.87
LTBR-210ENST00000542830 TAL1P17542 331 aaPredicted RBP20.48■□□□□ 0.87
LTBR-210ENST00000542830 SNAP25P60880 206 aa20.48■□□□□ 0.87
LTBR-210ENST00000542830 LRRC41Q15345 812 aa20.48■□□□□ 0.87
LTBR-210ENST00000542830 RNF180Q86T96 592 aa20.48■□□□□ 0.87
LTBR-210ENST00000542830 FAM133AQ8N9E0 248 aa20.48■□□□□ 0.87
LTBR-210ENST00000542830 ZSCAN10Q96SZ4 725 aaPredicted RBP20.48■□□□□ 0.87
LTBR-210ENST00000542830 PRO3102Q9H379 93 aa20.48■□□□□ 0.87
LTBR-210ENST00000542830 KAT14Q9H8E8 782 aa20.48■□□□□ 0.87
LTBR-210ENST00000542830 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.48■□□□□ 0.87
LTBR-210ENST00000542830 ZSWIM5Q9P217 1185 aa20.48■□□□□ 0.87
LTBR-210ENST00000542830 ZHX1Q9UKY1 873 aaPredicted RBP20.48■□□□□ 0.87
LTBR-210ENST00000542830 FAM184BQ9ULE4 1060 aa20.48■□□□□ 0.87
LTBR-210ENST00000542830 ZMYND8Q9ULU4 1186 aaPredicted RBP20.48■□□□□ 0.87
LTBR-210ENST00000542830 MYCNP04198 464 aaPredicted RBP20.47■□□□□ 0.87
LTBR-210ENST00000542830 ACVR2BQ13705 512 aa20.47■□□□□ 0.87
LTBR-210ENST00000542830 ARMCX2Q7L311 632 aa20.47■□□□□ 0.87
LTBR-210ENST00000542830 PNMA1Q8ND90 353 aa20.47■□□□□ 0.87
LTBR-210ENST00000542830 FGD4Q96M96 766 aa20.47■□□□□ 0.87
LTBR-210ENST00000542830 UBAC1Q9BSL1 405 aa20.47■□□□□ 0.87
LTBR-210ENST00000542830 U3KPZ7 1027 aaPredicted RBP20.47■□□□□ 0.87
LTBR-210ENST00000542830 A0A1W2PPC1 479 aa20.46■□□□□ 0.87
LTBR-210ENST00000542830 ASB14A6NK59 587 aa20.46■□□□□ 0.87
LTBR-210ENST00000542830 SGSM2O43147 1006 aa20.46■□□□□ 0.87
LTBR-210ENST00000542830 TRDNQ13061 729 aa20.46■□□□□ 0.87
LTBR-210ENST00000542830 MUM1L1Q5H9M0 696 aa20.46■□□□□ 0.87
LTBR-210ENST00000542830 TNKSO95271 1327 aa20.46■□□□□ 0.87
LTBR-210ENST00000542830 ATN1P54259 1190 aaPredicted RBP20.45■□□□□ 0.86
LTBR-210ENST00000542830 CNTN2Q02246 1040 aa20.45■□□□□ 0.86
LTBR-210ENST00000542830 CCDC144CPQ8IYA2 1237 aa20.45■□□□□ 0.86
LTBR-210ENST00000542830 ENAHQ8N8S7 591 aaPredicted RBP20.45■□□□□ 0.86
LTBR-210ENST00000542830 CYP39A1Q9NYL5 469 aa20.45■□□□□ 0.86
LTBR-210ENST00000542830 DUSP11O75319 330 aaKnown RBP20.44■□□□□ 0.86
LTBR-210ENST00000542830 PGK1P00558 417 aa20.44■□□□□ 0.86
LTBR-210ENST00000542830 SYN1P17600 705 aa20.44■□□□□ 0.86
LTBR-210ENST00000542830 BMP8BP34820 402 aa20.44■□□□□ 0.86
LTBR-210ENST00000542830 FXR1P51114 621 aaKnown RBP eCLIP20.44■□□□□ 0.86
LTBR-210ENST00000542830 ASPRV1Q53RT3 343 aa20.44■□□□□ 0.86
LTBR-210ENST00000542830 NSMFQ6X4W1 530 aa20.44■□□□□ 0.86
LTBR-210ENST00000542830 SLC39A5Q6ZMH5 540 aa20.44■□□□□ 0.86
LTBR-210ENST00000542830 CENPQQ7L2Z9 268 aaPredicted RBP20.44■□□□□ 0.86
LTBR-210ENST00000542830 GDF15Q99988 308 aa20.44■□□□□ 0.86
LTBR-210ENST00000542830 PHF24Q9UPV7 400 aa20.44■□□□□ 0.86
LTBR-210ENST00000542830 WDR19Q8NEZ3 1342 aa20.44■□□□□ 0.86
LTBR-210ENST00000542830 SOWAHBA6NEL2 793 aa20.43■□□□□ 0.86
LTBR-210ENST00000542830 ADCYAP1R1P41586 468 aa20.43■□□□□ 0.86
LTBR-210ENST00000542830 RTP1P59025 263 aa20.43■□□□□ 0.86
LTBR-210ENST00000542830 PTH1RQ03431 593 aa20.43■□□□□ 0.86
LTBR-210ENST00000542830 SNX17Q15036 470 aa20.43■□□□□ 0.86
LTBR-210ENST00000542830 IFIT1BQ5T764 474 aaKnown RBP20.43■□□□□ 0.86
LTBR-210ENST00000542830 C1orf53Q5VUE5 145 aa20.43■□□□□ 0.86
LTBR-210ENST00000542830 TSEN34Q9BSV6 310 aaKnown RBP20.43■□□□□ 0.86
LTBR-210ENST00000542830 SPC25Q9HBM1 224 aa20.43■□□□□ 0.86
LTBR-210ENST00000542830 ADAMTS4O75173 837 aa20.42■□□□□ 0.86
LTBR-210ENST00000542830 CYP21A2P08686 494 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms