RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 SYNGAP1Q96PV0 1343 aa23.59■■□□□ 1.37
DDX11-220ENST00000542244 SOWAHBA6NEL2 793 aa23.58■■□□□ 1.37
DDX11-220ENST00000542244 TSPY2A6NKD2 308 aa23.58■■□□□ 1.37
DDX11-220ENST00000542244 NMIQ13287 307 aaPredicted RBP23.58■■□□□ 1.37
DDX11-220ENST00000542244 ACVR2BQ13705 512 aa23.58■■□□□ 1.37
DDX11-220ENST00000542244 C1orf53Q5VUE5 145 aa23.58■■□□□ 1.37
DDX11-220ENST00000542244 TTBK2Q6IQ55 1244 aa23.58■■□□□ 1.37
DDX11-220ENST00000542244 GPR153Q6NV75 609 aa23.58■■□□□ 1.37
DDX11-220ENST00000542244 RNF180Q86T96 592 aa23.58■■□□□ 1.37
DDX11-220ENST00000542244 STAG1Q8WVM7 1258 aa23.58■■□□□ 1.37
DDX11-220ENST00000542244 PURBQ96QR8 312 aaKnown RBP23.58■■□□□ 1.37
DDX11-220ENST00000542244 PRKAG2Q9UGJ0 569 aa23.58■■□□□ 1.37
DDX11-220ENST00000542244 ANAPC4Q9UJX5 808 aa23.58■■□□□ 1.37
DDX11-220ENST00000542244 RANBP6O60518 1105 aaKnown RBP23.57■■□□□ 1.36
DDX11-220ENST00000542244 IGHDP01880 384 aa23.57■■□□□ 1.36
DDX11-220ENST00000542244 FGAP02671 866 aa23.57■■□□□ 1.36
DDX11-220ENST00000542244 SLC3A2P08195 630 aaKnown RBP23.57■■□□□ 1.36
DDX11-220ENST00000542244 SLC1A4P43007 532 aa23.57■■□□□ 1.36
DDX11-220ENST00000542244 KCNA10Q16322 511 aa23.57■■□□□ 1.36
DDX11-220ENST00000542244 MUM1L1Q5H9M0 696 aa23.57■■□□□ 1.36
DDX11-220ENST00000542244 CCDC174Q6PII3 467 aa23.57■■□□□ 1.36
DDX11-220ENST00000542244 ARMCX2Q7L311 632 aa23.57■■□□□ 1.36
DDX11-220ENST00000542244 CHST13Q8NET6 341 aa23.57■■□□□ 1.36
DDX11-220ENST00000542244 A1CFQ9NQ94 594 aaKnown RBP23.57■■□□□ 1.36
DDX11-220ENST00000542244 FAM184BQ9ULE4 1060 aa23.57■■□□□ 1.36
DDX11-220ENST00000542244 MCM3APO60318 1980 aa23.57■■□□□ 1.36
DDX11-220ENST00000542244 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.56■■□□□ 1.36
DDX11-220ENST00000542244 PQBP1O60828 265 aaKnown RBP23.56■■□□□ 1.36
DDX11-220ENST00000542244 FGRP09769 529 aa23.56■■□□□ 1.36
DDX11-220ENST00000542244 NOVP48745 357 aa23.56■■□□□ 1.36
DDX11-220ENST00000542244 STAT2P52630 851 aa23.56■■□□□ 1.36
DDX11-220ENST00000542244 ACLYP53396 1101 aa23.56■■□□□ 1.36
DDX11-220ENST00000542244 OAZ1P54368 228 aa23.56■■□□□ 1.36
DDX11-220ENST00000542244 TMEM63BQ5T3F8 832 aa23.56■■□□□ 1.36
DDX11-220ENST00000542244 B4GALNT3Q6L9W6 998 aa23.56■■□□□ 1.36
DDX11-220ENST00000542244 ZNF467Q7Z7K2 595 aaPredicted RBP23.56■■□□□ 1.36
DDX11-220ENST00000542244 CCDC144CPQ8IYA2 1237 aa23.56■■□□□ 1.36
DDX11-220ENST00000542244 MSL3Q8N5Y2 521 aaKnown RBP23.56■■□□□ 1.36
DDX11-220ENST00000542244 FAM133AQ8N9E0 248 aa23.56■■□□□ 1.36
DDX11-220ENST00000542244 FAM161BQ96MY7 647 aa23.56■■□□□ 1.36
DDX11-220ENST00000542244 HELLSQ9NRZ9 838 aa23.56■■□□□ 1.36
DDX11-220ENST00000542244 RNF146Q9NTX7 359 aa23.56■■□□□ 1.36
DDX11-220ENST00000542244 PRR12Q9ULL5 1215 aa23.56■■□□□ 1.36
DDX11-220ENST00000542244 POTEB2H3BUK9 544 aa23.55■■□□□ 1.36
DDX11-220ENST00000542244 CTAGE5O15320 804 aa23.55■■□□□ 1.36
DDX11-220ENST00000542244 HAND2P61296 217 aa23.55■■□□□ 1.36
DDX11-220ENST00000542244 IKQ13123 557 aaPredicted RBP23.55■■□□□ 1.36
DDX11-220ENST00000542244 ALX1Q15699 326 aa23.55■■□□□ 1.36
DDX11-220ENST00000542244 CCDC144BQ3MJ40 725 aa23.55■■□□□ 1.36
DDX11-220ENST00000542244 RCSD1Q6JBY9 416 aa23.55■■□□□ 1.36
DDX11-220ENST00000542244 LAMA2P24043 3122 aaKnown RBP23.55■■□□□ 1.36
DDX11-220ENST00000542244 ORC4O43929 436 aa23.54■■□□□ 1.36
DDX11-220ENST00000542244 HSPD1P10809 573 aaKnown RBP23.54■■□□□ 1.36
DDX11-220ENST00000542244 ALAS1P13196 640 aa23.54■■□□□ 1.36
DDX11-220ENST00000542244 SLC16A2P36021 539 aa23.54■■□□□ 1.36
DDX11-220ENST00000542244 RRP12Q5JTH9 1297 aaKnown RBP23.54■■□□□ 1.36
DDX11-220ENST00000542244 SLC17A8Q8NDX2 589 aa23.54■■□□□ 1.36
DDX11-220ENST00000542244 GUCD1Q96NT3 240 aa23.54■■□□□ 1.36
DDX11-220ENST00000542244 TRERF1Q96PN7 1200 aa23.54■■□□□ 1.36
DDX11-220ENST00000542244 ACAD9Q9H845 621 aa23.54■■□□□ 1.36
DDX11-220ENST00000542244 CLTBP09497 229 aa23.53■■□□□ 1.36
DDX11-220ENST00000542244 FAAP100Q0VG06 881 aa23.53■■□□□ 1.36
DDX11-220ENST00000542244 MCMDC2Q4G0Z9 681 aa23.53■■□□□ 1.36
DDX11-220ENST00000542244 FAM160B2Q86V87 743 aa23.53■■□□□ 1.36
DDX11-220ENST00000542244 CHURC1Q8WUH1 139 aa23.53■■□□□ 1.36
DDX11-220ENST00000542244 ZBTB47Q9UFB7 747 aaPredicted RBP23.53■■□□□ 1.36
DDX11-220ENST00000542244 FBXO40Q9UH90 709 aa23.53■■□□□ 1.36
DDX11-220ENST00000542244 DUSP11O75319 330 aaKnown RBP23.52■■□□□ 1.36
DDX11-220ENST00000542244 TBC1D10CQ8IV04 446 aa23.52■■□□□ 1.36
DDX11-220ENST00000542244 SMC5Q8IY18 1101 aa23.52■■□□□ 1.36
DDX11-220ENST00000542244 TMEM47Q9BQJ4 181 aa23.52■■□□□ 1.36
DDX11-220ENST00000542244 TSEN34Q9BSV6 310 aaKnown RBP23.52■■□□□ 1.36
DDX11-220ENST00000542244 PDGFCQ9NRA1 345 aa23.52■■□□□ 1.36
DDX11-220ENST00000542244 TOMM22Q9NS69 142 aa23.52■■□□□ 1.36
DDX11-220ENST00000542244 FRMPD2Q68DX3 1309 aaPredicted RBP23.52■■□□□ 1.36
DDX11-220ENST00000542244 KIAA0355O15063 1070 aa23.51■■□□□ 1.35
DDX11-220ENST00000542244 PLA2G6O60733 806 aa23.51■■□□□ 1.35
DDX11-220ENST00000542244 C6orf222P0C671 652 aaPredicted RBP23.51■■□□□ 1.35
DDX11-220ENST00000542244 BEX3Q00994 111 aa23.51■■□□□ 1.35
DDX11-220ENST00000542244 CCDC96Q2M329 555 aa23.51■■□□□ 1.35
DDX11-220ENST00000542244 EXOC6Q8TAG9 804 aa23.51■■□□□ 1.35
DDX11-220ENST00000542244 RILPL2Q969X0 211 aa23.51■■□□□ 1.35
DDX11-220ENST00000542244 UPF3AQ9H1J1 476 aaKnown RBP23.51■■□□□ 1.35
DDX11-220ENST00000542244 ABHD16BQ9H3Z7 469 aa23.51■■□□□ 1.35
DDX11-220ENST00000542244 STARD7Q9NQZ5 370 aa23.51■■□□□ 1.35
DDX11-220ENST00000542244 LCTP09848 1927 aa23.51■■□□□ 1.35
DDX11-220ENST00000542244 TRIM6-TRIM34B2RNG4 842 aa23.5■■□□□ 1.35
DDX11-220ENST00000542244 ASGR1P07306 291 aa23.5■■□□□ 1.35
DDX11-220ENST00000542244 PLEKHM2Q8IWE5 1019 aa23.5■■□□□ 1.35
DDX11-220ENST00000542244 GPCPD1Q9NPB8 672 aa23.5■■□□□ 1.35
DDX11-220ENST00000542244 STXBP5LQ9Y2K9 1186 aa23.5■■□□□ 1.35
DDX11-220ENST00000542244 CST5P28325 142 aaPredicted RBP23.49■■□□□ 1.35
DDX11-220ENST00000542244 GJA9P57773 515 aa23.49■■□□□ 1.35
DDX11-220ENST00000542244 EEPD1Q7L9B9 569 aa23.49■■□□□ 1.35
DDX11-220ENST00000542244 ANKRD33Q7Z3H0 272 aa23.49■■□□□ 1.35
DDX11-220ENST00000542244 TMEM39AQ9NV64 488 aa23.49■■□□□ 1.35
DDX11-220ENST00000542244 CYP39A1Q9NYL5 469 aa23.49■■□□□ 1.35
DDX11-220ENST00000542244 LRRC37A2A6NM11 1700 aa23.49■■□□□ 1.35
DDX11-220ENST00000542244 FDX1P10109 184 aa23.48■■□□□ 1.35
DDX11-220ENST00000542244 CDK7P50613 346 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms