RNA–Protein interactions for RNA: ENST00000542179.1

LDHA-220, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 1,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-220ENST00000542179 PHF20Q9BVI0 1012 aa10.65□□□□□ -0.7
LDHA-220ENST00000542179 SCAND2PQ9GZW5 306 aaPredicted RBP10.65□□□□□ -0.7
LDHA-220ENST00000542179 FOXP1Q9H334 677 aaPredicted RBP10.65□□□□□ -0.7
LDHA-220ENST00000542179 TAF1DQ9H5J8 278 aaPredicted RBP10.65□□□□□ -0.7
LDHA-220ENST00000542179 LMBRD1Q9NUN5 540 aa10.65□□□□□ -0.7
LDHA-220ENST00000542179 CFAP45Q9UL16 551 aa10.65□□□□□ -0.7
LDHA-220ENST00000542179 ELP1O95163 1332 aa10.64□□□□□ -0.71
LDHA-220ENST00000542179 FRMPD2Q68DX3 1309 aaPredicted RBP10.64□□□□□ -0.71
LDHA-220ENST00000542179 ATAD5Q96QE3 1844 aa10.64□□□□□ -0.71
LDHA-220ENST00000542179 KIF28PB7ZC32 967 aa10.64□□□□□ -0.71
LDHA-220ENST00000542179 BHMG1C9JSJ3 638 aaPredicted RBP10.64□□□□□ -0.71
LDHA-220ENST00000542179 PLA2G6O60733 806 aa10.64□□□□□ -0.71
LDHA-220ENST00000542179 NDUFB10O96000 172 aa10.64□□□□□ -0.71
LDHA-220ENST00000542179 SLC1A4P43007 532 aa10.64□□□□□ -0.71
LDHA-220ENST00000542179 NOL9Q5SY16 702 aaKnown RBP10.64□□□□□ -0.71
LDHA-220ENST00000542179 GALNT17Q6IS24 598 aa10.64□□□□□ -0.71
LDHA-220ENST00000542179 BTNL9Q6UXG8 535 aa10.64□□□□□ -0.71
LDHA-220ENST00000542179 RASGRP2Q7LDG7 609 aa10.64□□□□□ -0.71
LDHA-220ENST00000542179 USP48Q86UV5 1035 aa10.64□□□□□ -0.71
LDHA-220ENST00000542179 SCYL3Q8IZE3 742 aa10.64□□□□□ -0.71
LDHA-220ENST00000542179 ACER1Q8TDN7 264 aa10.64□□□□□ -0.71
LDHA-220ENST00000542179 DDX12PQ92771 950 aa10.64□□□□□ -0.71
LDHA-220ENST00000542179 SHISA4Q96DD7 197 aa10.64□□□□□ -0.71
LDHA-220ENST00000542179 KLRG1Q96E93 195 aa10.64□□□□□ -0.71
LDHA-220ENST00000542179 CHAMP1Q96JM3 812 aa10.64□□□□□ -0.71
LDHA-220ENST00000542179 ZNF396Q96N95 335 aaPredicted RBP10.64□□□□□ -0.71
LDHA-220ENST00000542179 WDR18Q9BV38 432 aa10.64□□□□□ -0.71
LDHA-220ENST00000542179 VCPKMTQ9H867 229 aa10.64□□□□□ -0.71
LDHA-220ENST00000542179 JMJD4Q9H9V9 463 aa10.64□□□□□ -0.71
LDHA-220ENST00000542179 GOPCQ9HD26 462 aa10.64□□□□□ -0.71
LDHA-220ENST00000542179 BARHL2Q9NY43 387 aa10.64□□□□□ -0.71
LDHA-220ENST00000542179 MTMR7Q9Y216 660 aa10.64□□□□□ -0.71
LDHA-220ENST00000542179 CNPY2Q9Y2B0 182 aa10.64□□□□□ -0.71
LDHA-220ENST00000542179 SSC5DA1L4H1 1573 aa10.64□□□□□ -0.71
LDHA-220ENST00000542179 MYH15Q9Y2K3 1946 aa10.63□□□□□ -0.71
LDHA-220ENST00000542179 PNMA6FA0A0J9YX94 578 aa10.63□□□□□ -0.71
LDHA-220ENST00000542179 hCG_1642624A0A1W2PR95 340 aa10.63□□□□□ -0.71
LDHA-220ENST00000542179 PRPF40AO75400 957 aaKnown RBP10.63□□□□□ -0.71
LDHA-220ENST00000542179 USP2O75604 605 aaPredicted RBP10.63□□□□□ -0.71
LDHA-220ENST00000542179 BMP3P12645 472 aa10.63□□□□□ -0.71
LDHA-220ENST00000542179 CALML3P27482 149 aa10.63□□□□□ -0.71
LDHA-220ENST00000542179 ECE1P42892 770 aa10.63□□□□□ -0.71
LDHA-220ENST00000542179 NBR1Q14596 966 aa10.63□□□□□ -0.71
LDHA-220ENST00000542179 CCDC96Q2M329 555 aa10.63□□□□□ -0.71
LDHA-220ENST00000542179 MYSM1Q5VVJ2 828 aa10.63□□□□□ -0.71
LDHA-220ENST00000542179 PRAMEF18Q5VWM3 479 aa10.63□□□□□ -0.71
LDHA-220ENST00000542179 TTBK2Q6IQ55 1244 aa10.63□□□□□ -0.71
LDHA-220ENST00000542179 FAM173BQ6P4H8 233 aa10.63□□□□□ -0.71
LDHA-220ENST00000542179 KCTD1Q719H9 257 aa10.63□□□□□ -0.71
LDHA-220ENST00000542179 NOSTRINQ8IVI9 506 aa10.63□□□□□ -0.71
LDHA-220ENST00000542179 DIS3L2Q8IYB7 885 aaKnown RBP10.63□□□□□ -0.71
LDHA-220ENST00000542179 ADGRF4Q8IZF3 695 aa10.63□□□□□ -0.71
LDHA-220ENST00000542179 DAGLBQ8NCG7 672 aa10.63□□□□□ -0.71
LDHA-220ENST00000542179 CCDC148Q8NFR7 591 aa10.63□□□□□ -0.71
LDHA-220ENST00000542179 CCDC12Q8WUD4 166 aaPredicted RBP10.63□□□□□ -0.71
LDHA-220ENST00000542179 PIGSQ96S52 555 aa10.63□□□□□ -0.71
LDHA-220ENST00000542179 UBA5Q9GZZ9 404 aa10.63□□□□□ -0.71
LDHA-220ENST00000542179 KIAA1683Q9H0B3 1180 aa10.63□□□□□ -0.71
LDHA-220ENST00000542179 GPCPD1Q9NPB8 672 aa10.63□□□□□ -0.71
LDHA-220ENST00000542179 VPS54Q9P1Q0 977 aa10.63□□□□□ -0.71
LDHA-220ENST00000542179 SEC63Q9UGP8 760 aaKnown RBP10.63□□□□□ -0.71
LDHA-220ENST00000542179 KCNJ14Q9UNX9 436 aa10.63□□□□□ -0.71
LDHA-220ENST00000542179 DOCK1Q14185 1865 aa10.63□□□□□ -0.71
LDHA-220ENST00000542179 POLR2AP24928 1970 aaKnown RBP10.63□□□□□ -0.71
LDHA-220ENST00000542179 ESYT2A0FGR8 921 aa10.62□□□□□ -0.71
LDHA-220ENST00000542179 BTBD18B2RXH4 712 aa10.62□□□□□ -0.71
LDHA-220ENST00000542179 STXBP3O00186 592 aa10.62□□□□□ -0.71
LDHA-220ENST00000542179 ZBTB5O15062 677 aa10.62□□□□□ -0.71
LDHA-220ENST00000542179 TRAK2O60296 914 aa10.62□□□□□ -0.71
LDHA-220ENST00000542179 VEGFAP15692 232 aaPredicted RBP10.62□□□□□ -0.71
LDHA-220ENST00000542179 INPP5BP32019 993 aa10.62□□□□□ -0.71
LDHA-220ENST00000542179 KRT2P35908 639 aa10.62□□□□□ -0.71
LDHA-220ENST00000542179 NPY5RQ15761 445 aa10.62□□□□□ -0.71
LDHA-220ENST00000542179 FOXD4L6Q3SYB3 417 aaPredicted RBP10.62□□□□□ -0.71
LDHA-220ENST00000542179 C6orf132Q5T0Z8 1188 aa10.62□□□□□ -0.71
LDHA-220ENST00000542179 WWC2Q6AWC2 1192 aa10.62□□□□□ -0.71
LDHA-220ENST00000542179 PPP1R18Q6NYC8 613 aa10.62□□□□□ -0.71
LDHA-220ENST00000542179 FOXD4L3Q6VB84 417 aaPredicted RBP10.62□□□□□ -0.71
LDHA-220ENST00000542179 KRT26Q7Z3Y9 468 aa10.62□□□□□ -0.71
LDHA-220ENST00000542179 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.62□□□□□ -0.715e-17■□□□□ 9.6
LDHA-220ENST00000542179 LPAR1Q92633 364 aa10.62□□□□□ -0.71
LDHA-220ENST00000542179 WRNIP1Q96S55 665 aa10.62□□□□□ -0.71
LDHA-220ENST00000542179 ZMYND12Q9H0C1 365 aa10.62□□□□□ -0.71
LDHA-220ENST00000542179 CPVLQ9H3G5 476 aa10.62□□□□□ -0.71
LDHA-220ENST00000542179 AS3MTQ9HBK9 375 aa10.62□□□□□ -0.71
LDHA-220ENST00000542179 BRMS1Q9HCU9 246 aa10.62□□□□□ -0.71
LDHA-220ENST00000542179 POLR3EQ9NVU0 708 aa10.62□□□□□ -0.71
LDHA-220ENST00000542179 RTEL1Q9NZ71 1219 aa10.62□□□□□ -0.71
LDHA-220ENST00000542179 RCOR1Q9UKL0 485 aa10.62□□□□□ -0.71
LDHA-220ENST00000542179 PCDHA4Q9UN74 947 aa10.62□□□□□ -0.71
LDHA-220ENST00000542179 ARIH1Q9Y4X5 557 aaPredicted RBP10.62□□□□□ -0.71
LDHA-220ENST00000542179 TCHHQ07283 1943 aa10.61□□□□□ -0.71
LDHA-220ENST00000542179 USP17L10C9JJH3 530 aa10.61□□□□□ -0.71
LDHA-220ENST00000542179 ADM5C9JUS6 153 aa10.61□□□□□ -0.71
LDHA-220ENST00000542179 PPP1R12BO60237 982 aaPredicted RBP10.61□□□□□ -0.71
LDHA-220ENST00000542179 PTPRAP18433 802 aa10.61□□□□□ -0.71
LDHA-220ENST00000542179 COL9A1P20849 921 aa10.61□□□□□ -0.71
LDHA-220ENST00000542179 NASPP49321 788 aaPredicted RBP10.61□□□□□ -0.71
LDHA-220ENST00000542179 USP14P54578 494 aa10.61□□□□□ -0.71
LDHA-220ENST00000542179 NLRP5P59047 1200 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms