RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 CIDEBQ9UHD4 219 aa4.9□□□□□ -1.63
SNHG1-219ENST00000542112 TPX2Q9ULW0 747 aaKnown RBP4.9□□□□□ -1.63
SNHG1-219ENST00000542112 ZNF644Q9H582 1327 aaPredicted RBP4.9□□□□□ -1.63
SNHG1-219ENST00000542112 AATKQ6ZMQ8 1374 aa4.9□□□□□ -1.63
SNHG1-219ENST00000542112 ABCC1P33527 1531 aa4.89□□□□□ -1.63
SNHG1-219ENST00000542112 PRDM15P57071 1507 aaPredicted RBP4.89□□□□□ -1.63
SNHG1-219ENST00000542112 ARHGEF12Q9NZN5 1544 aa4.89□□□□□ -1.63
SNHG1-219ENST00000542112 SRRM3A6NNA2 597 aaPredicted RBP4.89□□□□□ -1.63
SNHG1-219ENST00000542112 GOLGA8AA7E2F4 631 aa4.89□□□□□ -1.63
SNHG1-219ENST00000542112 MAP2K7O14733 419 aa4.89□□□□□ -1.63
SNHG1-219ENST00000542112 MARCH6O60337 910 aa4.89□□□□□ -1.63
SNHG1-219ENST00000542112 KDM1AO60341 852 aa4.89□□□□□ -1.63
SNHG1-219ENST00000542112 GADD45BO75293 160 aaPredicted RBP4.89□□□□□ -1.63
SNHG1-219ENST00000542112 TRIM37O94972 964 aa4.89□□□□□ -1.63
SNHG1-219ENST00000542112 PSAPP07602 524 aa4.89□□□□□ -1.63
SNHG1-219ENST00000542112 HOXD8P13378 290 aaPredicted RBP4.89□□□□□ -1.63
SNHG1-219ENST00000542112 RPL17P18621 184 aaKnown RBP4.89□□□□□ -1.63
SNHG1-219ENST00000542112 TRIM21P19474 475 aaKnown RBP4.89□□□□□ -1.63
SNHG1-219ENST00000542112 RPL13P26373 211 aaKnown RBP4.89□□□□□ -1.63
SNHG1-219ENST00000542112 SOX18P35713 384 aa4.89□□□□□ -1.63
SNHG1-219ENST00000542112 ZNF76P36508 570 aa4.89□□□□□ -1.63
SNHG1-219ENST00000542112 PAPOLAP51003 745 aaKnown RBP4.89□□□□□ -1.63
SNHG1-219ENST00000542112 NEK2P51955 445 aa4.89□□□□□ -1.63
SNHG1-219ENST00000542112 ST5P78524 1137 aa4.89□□□□□ -1.63
SNHG1-219ENST00000542112 SPEM2Q0P670 501 aa4.89□□□□□ -1.63
SNHG1-219ENST00000542112 EIF2B5Q13144 721 aaKnown RBP4.89□□□□□ -1.63
SNHG1-219ENST00000542112 CUL3Q13618 768 aa4.89□□□□□ -1.63
SNHG1-219ENST00000542112 ELF2Q15723 593 aa4.89□□□□□ -1.63
SNHG1-219ENST00000542112 CNGA3Q16281 694 aa4.89□□□□□ -1.63
SNHG1-219ENST00000542112 PKN1Q16512 942 aa4.89□□□□□ -1.63
SNHG1-219ENST00000542112 KIF4BQ2VIQ3 1234 aa4.89□□□□□ -1.63
SNHG1-219ENST00000542112 ZNF394Q53GI3 561 aa4.89□□□□□ -1.63
SNHG1-219ENST00000542112 PARP10Q53GL7 1025 aa4.89□□□□□ -1.63
SNHG1-219ENST00000542112 CCDC93Q567U6 631 aa4.89□□□□□ -1.63
SNHG1-219ENST00000542112 SH2D4BQ5SQS7 431 aa4.89□□□□□ -1.63
SNHG1-219ENST00000542112 LDLRAD1Q5T700 205 aa4.89□□□□□ -1.63
SNHG1-219ENST00000542112 SFMBT2Q5VUG0 894 aa4.89□□□□□ -1.63
SNHG1-219ENST00000542112 TLDC1Q6P9B6 456 aa4.89□□□□□ -1.63
SNHG1-219ENST00000542112 CLEC4GQ6UXB4 293 aa4.89□□□□□ -1.63
SNHG1-219ENST00000542112 KRT25Q7Z3Z0 450 aa4.89□□□□□ -1.63
SNHG1-219ENST00000542112 SESTD1Q86VW0 696 aa4.89□□□□□ -1.63
SNHG1-219ENST00000542112 ELOA2Q8IYF1 753 aaPredicted RBP4.89□□□□□ -1.63
SNHG1-219ENST00000542112 ATP11CQ8NB49 1132 aa4.89□□□□□ -1.63
SNHG1-219ENST00000542112 NUP133Q8WUM0 1156 aa4.89□□□□□ -1.63
SNHG1-219ENST00000542112 TBC1D5Q92609 795 aa4.89□□□□□ -1.63
SNHG1-219ENST00000542112 JARID2Q92833 1246 aaPredicted RBP4.89□□□□□ -1.63
SNHG1-219ENST00000542112 RNF34Q969K3 372 aa4.89□□□□□ -1.63
SNHG1-219ENST00000542112 UIMC1Q96RL1 719 aa4.89□□□□□ -1.63
SNHG1-219ENST00000542112 PAGR1Q9BTK6 254 aa4.89□□□□□ -1.63
SNHG1-219ENST00000542112 MMADHCQ9H3L0 296 aaPredicted RBP4.89□□□□□ -1.63
SNHG1-219ENST00000542112 SUV39H2Q9H5I1 410 aa4.89□□□□□ -1.63
SNHG1-219ENST00000542112 VIPAS39Q9H9C1 493 aa4.89□□□□□ -1.63
SNHG1-219ENST00000542112 PDRG1Q9NUG6 133 aa4.89□□□□□ -1.63
SNHG1-219ENST00000542112 IFT57Q9NWB7 429 aa4.89□□□□□ -1.63
SNHG1-219ENST00000542112 TMED5Q9Y3A6 229 aa4.89□□□□□ -1.63
SNHG1-219ENST00000542112 ATP6V0A2Q9Y487 856 aa4.89□□□□□ -1.63
SNHG1-219ENST00000542112 DAAM1Q9Y4D1 1078 aa4.89□□□□□ -1.63
SNHG1-219ENST00000542112 COMMD10Q9Y6G5 202 aa4.89□□□□□ -1.63
SNHG1-219ENST00000542112 TTC41PQ6P2S7 1318 aa4.89□□□□□ -1.63
SNHG1-219ENST00000542112 PHLPP2Q6ZVD8 1323 aa4.89□□□□□ -1.63
SNHG1-219ENST00000542112 MAP3K4Q9Y6R4 1608 aa4.89□□□□□ -1.63
SNHG1-219ENST00000542112 ATP10AO60312 1499 aa4.88□□□□□ -1.63
SNHG1-219ENST00000542112 WDR7Q9Y4E6 1490 aa4.88□□□□□ -1.63
SNHG1-219ENST00000542112 SYNMO15061 1565 aa4.88□□□□□ -1.63
SNHG1-219ENST00000542112 GOLGA6L7A0A1B0GV03 622 aa4.88□□□□□ -1.63
SNHG1-219ENST00000542112 CCDC162PA2VCL2 907 aa4.88□□□□□ -1.63
SNHG1-219ENST00000542112 FAM177BA6PVY3 158 aa4.88□□□□□ -1.63
SNHG1-219ENST00000542112 CREB3O43889 395 aa4.88□□□□□ -1.63
SNHG1-219ENST00000542112 MMP20O60882 483 aa4.88□□□□□ -1.63
SNHG1-219ENST00000542112 MTRF1O75570 445 aaKnown RBP4.88□□□□□ -1.63
SNHG1-219ENST00000542112 KIAA0754O94854 1291 aa4.88□□□□□ -1.63
SNHG1-219ENST00000542112 POLR3DP05423 398 aaPredicted RBP4.88□□□□□ -1.63
SNHG1-219ENST00000542112 FOSL1P15407 271 aa4.88□□□□□ -1.63
SNHG1-219ENST00000542112 NFKB1P19838 968 aa4.88□□□□□ -1.63
SNHG1-219ENST00000542112 FGFR3P22607 806 aa4.88□□□□□ -1.63
SNHG1-219ENST00000542112 TARSP26639 723 aaKnown RBP4.88□□□□□ -1.63
SNHG1-219ENST00000542112 ERCC5P28715 1186 aaPredicted RBP4.88□□□□□ -1.63
SNHG1-219ENST00000542112 IRS1P35568 1242 aa4.88□□□□□ -1.63
SNHG1-219ENST00000542112 CCT6AP40227 531 aaKnown RBP4.88□□□□□ -1.63
SNHG1-219ENST00000542112 FNTAP49354 379 aa4.88□□□□□ -1.63
SNHG1-219ENST00000542112 GSDMDP57764 484 aa4.88□□□□□ -1.63
SNHG1-219ENST00000542112 NLRP5P59047 1200 aa4.88□□□□□ -1.63
SNHG1-219ENST00000542112 ZC3H6P61129 1189 aaKnown RBP4.88□□□□□ -1.63
SNHG1-219ENST00000542112 FANCCQ00597 558 aa4.88□□□□□ -1.63
SNHG1-219ENST00000542112 POU5F1Q01860 360 aaKnown RBP4.88□□□□□ -1.63
SNHG1-219ENST00000542112 PLAURQ03405 335 aa4.88□□□□□ -1.63
SNHG1-219ENST00000542112 HYAL2Q12891 473 aa4.88□□□□□ -1.63
SNHG1-219ENST00000542112 CCDC152Q4G0S7 254 aa4.88□□□□□ -1.63
SNHG1-219ENST00000542112 CEP85LQ5SZL2 805 aa4.88□□□□□ -1.63
SNHG1-219ENST00000542112 KIAA0319Q5VV43 1072 aa4.88□□□□□ -1.63
SNHG1-219ENST00000542112 CAPRIN2Q6IMN6 1127 aaKnown RBP4.88□□□□□ -1.63
SNHG1-219ENST00000542112 CC2D1AQ6P1N0 951 aaPredicted RBP4.88□□□□□ -1.63
SNHG1-219ENST00000542112 KCNV1Q6PIU1 500 aa4.88□□□□□ -1.63
SNHG1-219ENST00000542112 CRELD2Q6UXH1 353 aaPredicted RBP4.88□□□□□ -1.63
SNHG1-219ENST00000542112 TTLL7Q6ZT98 887 aa4.88□□□□□ -1.63
SNHG1-219ENST00000542112 HDXQ7Z353 690 aa4.88□□□□□ -1.63
SNHG1-219ENST00000542112 RPAP2Q8IXW5 612 aaPredicted RBP4.88□□□□□ -1.63
SNHG1-219ENST00000542112 PEX5LQ8IYB4 626 aa4.88□□□□□ -1.63
SNHG1-219ENST00000542112 GALNT15Q8N3T1 639 aa4.88□□□□□ -1.63
SNHG1-219ENST00000542112 TEX9Q8N6V9 391 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms