RNA–Protein interactions for RNA: ENST00000541852.5

ITM2C-208, Transcript of integral membrane protein 2C, humanhuman

TSL 3

Gene ITM2C, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-208ENST00000541852 PCDHB15Q9Y5E8 787 aa17.72■□□□□ 0.43
ITM2C-208ENST00000541852 TMEM232C9JQI7 657 aa17.71■□□□□ 0.43
ITM2C-208ENST00000541852 SH3RF1Q7Z6J0 888 aa17.71■□□□□ 0.43
ITM2C-208ENST00000541852 SEC62Q99442 399 aaKnown RBP17.71■□□□□ 0.43
ITM2C-208ENST00000541852 ACAD9Q9H845 621 aa17.71■□□□□ 0.43
ITM2C-208ENST00000541852 ZHX1Q9UKY1 873 aaPredicted RBP17.71■□□□□ 0.43
ITM2C-208ENST00000541852 SYNRGQ9UMZ2 1314 aa17.71■□□□□ 0.42
ITM2C-208ENST00000541852 ASB14A6NK59 587 aa17.7■□□□□ 0.42
ITM2C-208ENST00000541852 TSPY2A6NKD2 308 aa17.7■□□□□ 0.42
ITM2C-208ENST00000541852 PQBP1O60828 265 aaKnown RBP17.7■□□□□ 0.42
ITM2C-208ENST00000541852 GJA9P57773 515 aa17.7■□□□□ 0.42
ITM2C-208ENST00000541852 IKQ13123 557 aaPredicted RBP17.7■□□□□ 0.42
ITM2C-208ENST00000541852 CCSAPQ6IQ19 270 aaPredicted RBP17.7■□□□□ 0.42
ITM2C-208ENST00000541852 RCSD1Q6JBY9 416 aa17.7■□□□□ 0.42
ITM2C-208ENST00000541852 CCDC174Q6PII3 467 aa17.7■□□□□ 0.42
ITM2C-208ENST00000541852 LRRC47Q8N1G4 583 aaKnown RBP17.7■□□□□ 0.42
ITM2C-208ENST00000541852 EVI5LQ96CN4 794 aa17.7■□□□□ 0.42
ITM2C-208ENST00000541852 SEZ6LQ9BYH1 1024 aa17.7■□□□□ 0.42
ITM2C-208ENST00000541852 ANAPC4Q9UJX5 808 aa17.7■□□□□ 0.42
ITM2C-208ENST00000541852 C6orf222P0C671 652 aaPredicted RBP17.69■□□□□ 0.42
ITM2C-208ENST00000541852 NKX3-2P78367 333 aa17.69■□□□□ 0.42
ITM2C-208ENST00000541852 FAAP100Q0VG06 881 aa17.69■□□□□ 0.42
ITM2C-208ENST00000541852 ALX1Q15699 326 aa17.69■□□□□ 0.42
ITM2C-208ENST00000541852 CCDC144BQ3MJ40 725 aa17.69■□□□□ 0.42
ITM2C-208ENST00000541852 C9orf50Q5SZB4 431 aa17.69■□□□□ 0.42
ITM2C-208ENST00000541852 VTI1AQ96AJ9 217 aa17.69■□□□□ 0.42
ITM2C-208ENST00000541852 UPF3AQ9H1J1 476 aaKnown RBP17.69■□□□□ 0.42
ITM2C-208ENST00000541852 SEMA6BQ9H3T3 888 aa17.69■□□□□ 0.42
ITM2C-208ENST00000541852 HELLSQ9NRZ9 838 aa17.69■□□□□ 0.42
ITM2C-208ENST00000541852 ISY1Q9ULR0 285 aaKnown RBP17.69■□□□□ 0.42
ITM2C-208ENST00000541852 STX8Q9UNK0 236 aa17.69■□□□□ 0.42
ITM2C-208ENST00000541852 LTBP2Q14767 1821 aa17.69■□□□□ 0.42
ITM2C-208ENST00000541852 TMEM265A0A087WTH1 108 aa17.68■□□□□ 0.42
ITM2C-208ENST00000541852 TIMP1P01033 207 aa17.68■□□□□ 0.42
ITM2C-208ENST00000541852 MCCP23508 829 aa17.68■□□□□ 0.42
ITM2C-208ENST00000541852 CDK7P50613 346 aa17.68■□□□□ 0.42
ITM2C-208ENST00000541852 FPGSQ05932 587 aa17.68■□□□□ 0.42
ITM2C-208ENST00000541852 AAMPQ13685 434 aa17.68■□□□□ 0.42
ITM2C-208ENST00000541852 GNASQ5JWF2 1037 aa17.68■□□□□ 0.42
ITM2C-208ENST00000541852 ANKRD45Q5TZF3 282 aa17.68■□□□□ 0.42
ITM2C-208ENST00000541852 ARMCX2Q7L311 632 aa17.68■□□□□ 0.42
ITM2C-208ENST00000541852 FAM133AQ8N9E0 248 aa17.68■□□□□ 0.42
ITM2C-208ENST00000541852 PNMA2Q9UL42 364 aa17.68■□□□□ 0.42
ITM2C-208ENST00000541852 CABYRO75952 493 aa17.67■□□□□ 0.42
ITM2C-208ENST00000541852 ASGR1P07306 291 aa17.67■□□□□ 0.42
ITM2C-208ENST00000541852 CCDC129Q6ZRS4 1044 aa17.67■□□□□ 0.42
ITM2C-208ENST00000541852 CCDC144CPQ8IYA2 1237 aa17.67■□□□□ 0.42
ITM2C-208ENST00000541852 RNPC3Q96LT9 517 aaKnown RBP17.67■□□□□ 0.42
ITM2C-208ENST00000541852 GUCD1Q96NT3 240 aa17.67■□□□□ 0.42
ITM2C-208ENST00000541852 TRERF1Q96PN7 1200 aa17.67■□□□□ 0.42
ITM2C-208ENST00000541852 RNF146Q9NTX7 359 aa17.67■□□□□ 0.42
ITM2C-208ENST00000541852 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.67■□□□□ 0.42
ITM2C-208ENST00000541852 A0A0U1RQG5 324 aaPredicted RBP17.66■□□□□ 0.42
ITM2C-208ENST00000541852 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.66■□□□□ 0.42
ITM2C-208ENST00000541852 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.66■□□□□ 0.42
ITM2C-208ENST00000541852 ARVCFO00192 962 aa17.66■□□□□ 0.42
ITM2C-208ENST00000541852 TLR3O15455 904 aaKnown RBP17.66■□□□□ 0.42
ITM2C-208ENST00000541852 ORC4O43929 436 aa17.66■□□□□ 0.42
ITM2C-208ENST00000541852 ZEB2O60315 1214 aa17.66■□□□□ 0.42
ITM2C-208ENST00000541852 RANBP6O60518 1105 aaKnown RBP17.66■□□□□ 0.42
ITM2C-208ENST00000541852 FGRP09769 529 aa17.66■□□□□ 0.42
ITM2C-208ENST00000541852 NOVP48745 357 aa17.66■□□□□ 0.42
ITM2C-208ENST00000541852 TNFAIP2Q03169 654 aa17.66■□□□□ 0.42
ITM2C-208ENST00000541852 IQSEC1Q6DN90 963 aa17.66■□□□□ 0.42
ITM2C-208ENST00000541852 DCAF4Q8WV16 495 aa17.66■□□□□ 0.42
ITM2C-208ENST00000541852 HOMER2Q9NSB8 354 aa17.66■□□□□ 0.42
ITM2C-208ENST00000541852 Q9Y3F1 56 aa17.66■□□□□ 0.42
ITM2C-208ENST00000541852 LOC102724159A0A0B4J2E5 919 aa17.65■□□□□ 0.42
ITM2C-208ENST00000541852 PCP11498 1178 aaKnown RBP17.65■□□□□ 0.42
ITM2C-208ENST00000541852 ITGB8P26012 769 aa17.65■□□□□ 0.42
ITM2C-208ENST00000541852 PPIGQ13427 754 aaKnown RBP eCLIP17.65■□□□□ 0.42
ITM2C-208ENST00000541852 HDAC1Q13547 482 aaPredicted RBP17.65■□□□□ 0.42
ITM2C-208ENST00000541852 PWP2Q15269 919 aaKnown RBP17.65■□□□□ 0.42
ITM2C-208ENST00000541852 MCMDC2Q4G0Z9 681 aa17.65■□□□□ 0.42
ITM2C-208ENST00000541852 MFSD5Q6N075 450 aa17.65■□□□□ 0.42
ITM2C-208ENST00000541852 NOL8Q76FK4 1167 aaKnown RBP17.65■□□□□ 0.42
ITM2C-208ENST00000541852 OTUD7AQ8TE49 926 aaPredicted RBP17.65■□□□□ 0.42
ITM2C-208ENST00000541852 LENG1Q96BZ8 264 aaPredicted RBP17.65■□□□□ 0.42
ITM2C-208ENST00000541852 FGD4Q96M96 766 aa17.65■□□□□ 0.42
ITM2C-208ENST00000541852 AGBL1Q96MI9 1066 aa17.65■□□□□ 0.42
ITM2C-208ENST00000541852 FAM161BQ96MY7 647 aa17.65■□□□□ 0.42
ITM2C-208ENST00000541852 CDX2Q99626 313 aaPredicted RBP17.65■□□□□ 0.42
ITM2C-208ENST00000541852 AP5M1Q9H0R1 490 aa17.65■□□□□ 0.42
ITM2C-208ENST00000541852 A1CFQ9NQ94 594 aaKnown RBP17.65■□□□□ 0.42
ITM2C-208ENST00000541852 IL17RBQ9NRM6 502 aa17.65■□□□□ 0.42
ITM2C-208ENST00000541852 TCP11L1Q9NUJ3 509 aa17.65■□□□□ 0.42
ITM2C-208ENST00000541852 ZNF536O15090 1300 aa17.65■□□□□ 0.42
ITM2C-208ENST00000541852 SALL3Q9BXA9 1300 aa17.65■□□□□ 0.42
ITM2C-208ENST00000541852 ALAS1P13196 640 aa17.64■□□□□ 0.41
ITM2C-208ENST00000541852 NT5C2P49902 561 aa17.64■□□□□ 0.41
ITM2C-208ENST00000541852 PDE1AP54750 535 aa17.64■□□□□ 0.41
ITM2C-208ENST00000541852 CNTN2Q02246 1040 aa17.64■□□□□ 0.41
ITM2C-208ENST00000541852 CTDSPL2Q05D32 466 aa17.64■□□□□ 0.41
ITM2C-208ENST00000541852 KCTD1Q719H9 257 aa17.64■□□□□ 0.41
ITM2C-208ENST00000541852 TMEM199Q8N511 208 aa17.64■□□□□ 0.41
ITM2C-208ENST00000541852 TTC14Q96N46 770 aa17.64■□□□□ 0.41
ITM2C-208ENST00000541852 KATNBL1Q9H079 304 aa17.64■□□□□ 0.41
ITM2C-208ENST00000541852 ADD3Q9UEY8 706 aaKnown RBP17.64■□□□□ 0.41
ITM2C-208ENST00000541852 TBX21Q9UL17 535 aa17.64■□□□□ 0.41
ITM2C-208ENST00000541852 PRR12Q9ULL5 1215 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms