RNA–Protein interactions for RNA: ENST00000541591.5

SUDS3-203, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 3

Gene SUDS3, Length 561 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-203ENST00000541591 ANAPC4Q9UJX5 808 aa16.6■□□□□ 0.25
SUDS3-203ENST00000541591 ZNF536O15090 1300 aa16.6■□□□□ 0.25
SUDS3-203ENST00000541591 NEDD4P46934 1319 aa16.6■□□□□ 0.25
SUDS3-203ENST00000541591 KIAA1217Q5T5P2 1943 aa16.6■□□□□ 0.25
SUDS3-203ENST00000541591 MYADML2A6NDP7 307 aa16.59■□□□□ 0.25
SUDS3-203ENST00000541591 RARBP10826 455 aa16.59■□□□□ 0.25
SUDS3-203ENST00000541591 SDSP20132 328 aa16.59■□□□□ 0.25
SUDS3-203ENST00000541591 COPB2P35606 906 aa16.59■□□□□ 0.25
SUDS3-203ENST00000541591 MUM1L1Q5H9M0 696 aa16.59■□□□□ 0.25
SUDS3-203ENST00000541591 CWC27Q6UX04 472 aaKnown RBP16.59■□□□□ 0.25
SUDS3-203ENST00000541591 SLC39A5Q6ZMH5 540 aa16.59■□□□□ 0.25
SUDS3-203ENST00000541591 PURBQ96QR8 312 aaKnown RBP16.59■□□□□ 0.25
SUDS3-203ENST00000541591 PRR12Q9ULL5 1215 aa16.59■□□□□ 0.25
SUDS3-203ENST00000541591 BAZ2BQ9UIF8 2168 aaKnown RBP16.59■□□□□ 0.25
SUDS3-203ENST00000541591 DNAJC25-GNG10A0A024R161 153 aa16.58■□□□□ 0.24
SUDS3-203ENST00000541591 ORC4O43929 436 aa16.58■□□□□ 0.24
SUDS3-203ENST00000541591 ALX1Q15699 326 aa16.58■□□□□ 0.24
SUDS3-203ENST00000541591 Q7L0L9 218 aa16.58■□□□□ 0.24
SUDS3-203ENST00000541591 SH3RF1Q7Z6J0 888 aa16.58■□□□□ 0.24
SUDS3-203ENST00000541591 STAG1Q8WVM7 1258 aa16.58■□□□□ 0.24
SUDS3-203ENST00000541591 GMCL1Q96IK5 515 aa16.58■□□□□ 0.24
SUDS3-203ENST00000541591 TMEM47Q9BQJ4 181 aa16.58■□□□□ 0.24
SUDS3-203ENST00000541591 CNPY2Q9Y2B0 182 aa16.58■□□□□ 0.24
SUDS3-203ENST00000541591 SYNRGQ9UMZ2 1314 aa16.58■□□□□ 0.24
SUDS3-203ENST00000541591 ATP2A1O14983 1001 aa16.57■□□□□ 0.24
SUDS3-203ENST00000541591 AKR1A1P14550 325 aa16.57■□□□□ 0.24
SUDS3-203ENST00000541591 PDE4AP27815 886 aa16.57■□□□□ 0.24
SUDS3-203ENST00000541591 RCSD1Q6JBY9 416 aa16.57■□□□□ 0.24
SUDS3-203ENST00000541591 FAM160B2Q86V87 743 aa16.57■□□□□ 0.24
SUDS3-203ENST00000541591 TDHQ8IZJ6 230 aa16.57■□□□□ 0.24
SUDS3-203ENST00000541591 TRERF1Q96PN7 1200 aa16.57■□□□□ 0.24
SUDS3-203ENST00000541591 IL25Q9H293 177 aa16.57■□□□□ 0.24
SUDS3-203ENST00000541591 ACAD9Q9H845 621 aa16.57■□□□□ 0.24
SUDS3-203ENST00000541591 A1CFQ9NQ94 594 aaKnown RBP16.57■□□□□ 0.24
SUDS3-203ENST00000541591 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.57■□□□□ 0.24
SUDS3-203ENST00000541591 DIS3Q9Y2L1 958 aaKnown RBP16.57■□□□□ 0.24
SUDS3-203ENST00000541591 LAMA2P24043 3122 aaKnown RBP16.56■□□□□ 0.24
SUDS3-203ENST00000541591 DOCK5Q9H7D0 1870 aa16.56■□□□□ 0.24
SUDS3-203ENST00000541591 ASTN1O14525 1302 aa16.56■□□□□ 0.24
SUDS3-203ENST00000541591 A0A1W2PQ45 241 aaPredicted RBP16.56■□□□□ 0.24
SUDS3-203ENST00000541591 A0A1W2PQY0 241 aa16.56■□□□□ 0.24
SUDS3-203ENST00000541591 BMP8BP34820 402 aa16.56■□□□□ 0.24
SUDS3-203ENST00000541591 ARMCX2Q7L311 632 aa16.56■□□□□ 0.24
SUDS3-203ENST00000541591 CCDC144CPQ8IYA2 1237 aa16.56■□□□□ 0.24
SUDS3-203ENST00000541591 CHST13Q8NET6 341 aa16.56■□□□□ 0.24
SUDS3-203ENST00000541591 CHURC1Q8WUH1 139 aa16.56■□□□□ 0.24
SUDS3-203ENST00000541591 CPVLQ9H3G5 476 aa16.56■□□□□ 0.24
SUDS3-203ENST00000541591 DIAPH3Q9NSV4 1193 aa16.56■□□□□ 0.24
SUDS3-203ENST00000541591 SYNPO2Q9UMS6 1093 aa16.56■□□□□ 0.24
SUDS3-203ENST00000541591 SCN5AQ14524 2016 aa16.56■□□□□ 0.24
SUDS3-203ENST00000541591 SYNGAP1Q96PV0 1343 aa16.55■□□□□ 0.24
SUDS3-203ENST00000541591 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.55■□□□□ 0.24
SUDS3-203ENST00000541591 A0A1W2PPC1 479 aa16.55■□□□□ 0.24
SUDS3-203ENST00000541591 SOWAHBA6NEL2 793 aa16.55■□□□□ 0.24
SUDS3-203ENST00000541591 POTEB2H3BUK9 544 aa16.55■□□□□ 0.24
SUDS3-203ENST00000541591 ADAMTS4O75173 837 aa16.55■□□□□ 0.24
SUDS3-203ENST00000541591 FGRP09769 529 aa16.55■□□□□ 0.24
SUDS3-203ENST00000541591 OAZ1P54368 228 aa16.55■□□□□ 0.24
SUDS3-203ENST00000541591 ACVR2BQ13705 512 aa16.55■□□□□ 0.24
SUDS3-203ENST00000541591 AKNAD1Q5T1N1 836 aa16.55■□□□□ 0.24
SUDS3-203ENST00000541591 NSMFQ6X4W1 530 aa16.55■□□□□ 0.24
SUDS3-203ENST00000541591 EEPD1Q7L9B9 569 aa16.55■□□□□ 0.24
SUDS3-203ENST00000541591 LBHD1Q9BQE6 289 aaPredicted RBP16.55■□□□□ 0.24
SUDS3-203ENST00000541591 PDLIM7Q9NR12 457 aa16.55■□□□□ 0.24
SUDS3-203ENST00000541591 CCPG1Q9ULG6 757 aa16.55■□□□□ 0.24
SUDS3-203ENST00000541591 PHF24Q9UPV7 400 aa16.55■□□□□ 0.24
SUDS3-203ENST00000541591 ZMYM6O95789 1325 aa16.54■□□□□ 0.24
SUDS3-203ENST00000541591 PQBP1O60828 265 aaKnown RBP16.54■□□□□ 0.24
SUDS3-203ENST00000541591 GOLGA8HP0CJ92 632 aa16.54■□□□□ 0.24
SUDS3-203ENST00000541591 TLE2Q04725 743 aa16.54■□□□□ 0.24
SUDS3-203ENST00000541591 CCDC144BQ3MJ40 725 aa16.54■□□□□ 0.24
SUDS3-203ENST00000541591 TMEM63BQ5T3F8 832 aa16.54■□□□□ 0.24
SUDS3-203ENST00000541591 MAMDC4Q6UXC1 1216 aa16.54■□□□□ 0.24
SUDS3-203ENST00000541591 MFSD6Q6ZSS7 791 aa16.54■□□□□ 0.24
SUDS3-203ENST00000541591 RNF180Q86T96 592 aa16.54■□□□□ 0.24
SUDS3-203ENST00000541591 DCAF4Q8WV16 495 aa16.54■□□□□ 0.24
SUDS3-203ENST00000541591 BADQ92934 168 aa16.54■□□□□ 0.24
SUDS3-203ENST00000541591 PRKAG2Q9UGJ0 569 aa16.54■□□□□ 0.24
SUDS3-203ENST00000541591 FBXO40Q9UH90 709 aa16.54■□□□□ 0.24
SUDS3-203ENST00000541591 FAM184BQ9ULE4 1060 aa16.54■□□□□ 0.24
SUDS3-203ENST00000541591 TRIM43BA6NCK2 446 aa16.53■□□□□ 0.24
SUDS3-203ENST00000541591 C6orf222P0C671 652 aaPredicted RBP16.53■□□□□ 0.24
SUDS3-203ENST00000541591 TOP1P11387 765 aaKnown RBP16.53■□□□□ 0.24
SUDS3-203ENST00000541591 GSPT1P15170 499 aaKnown RBP16.53■□□□□ 0.24
SUDS3-203ENST00000541591 ITGB8P26012 769 aa16.53■□□□□ 0.24
SUDS3-203ENST00000541591 BEX3Q00994 111 aa16.53■□□□□ 0.24
SUDS3-203ENST00000541591 AAMPQ13685 434 aa16.53■□□□□ 0.24
SUDS3-203ENST00000541591 SNX17Q15036 470 aa16.53■□□□□ 0.24
SUDS3-203ENST00000541591 SYDE2Q5VT97 1194 aa16.53■□□□□ 0.24
SUDS3-203ENST00000541591 FBXO16Q8IX29 292 aaPredicted RBP16.53■□□□□ 0.24
SUDS3-203ENST00000541591 FAM133AQ8N9E0 248 aa16.53■□□□□ 0.24
SUDS3-203ENST00000541591 TRIM43Q96BQ3 446 aaPredicted RBP16.53■□□□□ 0.24
SUDS3-203ENST00000541591 KATNBL1Q9H079 304 aa16.53■□□□□ 0.24
SUDS3-203ENST00000541591 OSBPL3Q9H4L5 887 aa16.53■□□□□ 0.24
SUDS3-203ENST00000541591 NRBP1Q9UHY1 535 aa16.53■□□□□ 0.24
SUDS3-203ENST00000541591 TRIP12Q14669 1992 aaPredicted RBP16.53■□□□□ 0.24
SUDS3-203ENST00000541591 B4E1Z4 1266 aa16.52■□□□□ 0.24
SUDS3-203ENST00000541591 NFIBO00712 420 aa16.52■□□□□ 0.24
SUDS3-203ENST00000541591 PDHBP11177 359 aa16.52■□□□□ 0.24
SUDS3-203ENST00000541591 NOVP48745 357 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms