RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 PCDHA8Q9Y5H6 950 aa10.76□□□□□ -0.69
CNOT4-212ENST00000541284 TTC26A0AVF1 554 aa10.76□□□□□ -0.69
CNOT4-212ENST00000541284 PARP1P09874 1014 aaKnown RBP10.76□□□□□ -0.69
CNOT4-212ENST00000541284 USP17L8P0C7I0 530 aa10.76□□□□□ -0.69
CNOT4-212ENST00000541284 NLRP5P59047 1200 aa10.76□□□□□ -0.69
CNOT4-212ENST00000541284 PCDHA4Q9UN74 947 aa10.76□□□□□ -0.69
CNOT4-212ENST00000541284 MAPK8IP1Q9UQF2 711 aa10.76□□□□□ -0.69
CNOT4-212ENST00000541284 LGALS16A8MUM7 142 aa10.75□□□□□ -0.69
CNOT4-212ENST00000541284 TULP2O00295 520 aa10.75□□□□□ -0.69
CNOT4-212ENST00000541284 N4BP3O15049 544 aa10.75□□□□□ -0.69
CNOT4-212ENST00000541284 KIF5CO60282 957 aa10.75□□□□□ -0.69
CNOT4-212ENST00000541284 GYS2P54840 703 aa10.75□□□□□ -0.69
CNOT4-212ENST00000541284 VSNL1P62760 191 aa10.75□□□□□ -0.69
CNOT4-212ENST00000541284 KCNB1Q14721 858 aa10.75□□□□□ -0.69
CNOT4-212ENST00000541284 GRM4Q14833 912 aa10.75□□□□□ -0.69
CNOT4-212ENST00000541284 GRIK5Q16478 980 aa10.75□□□□□ -0.69
CNOT4-212ENST00000541284 MEA1Q16626 185 aa10.75□□□□□ -0.69
CNOT4-212ENST00000541284 CAVIN4Q5BKX8 364 aa10.75□□□□□ -0.69
CNOT4-212ENST00000541284 WWC2Q6AWC2 1192 aa10.75□□□□□ -0.69
CNOT4-212ENST00000541284 MB21D1Q8N884 522 aa10.75□□□□□ -0.69
CNOT4-212ENST00000541284 CTCFLQ8NI51 663 aaPredicted RBP10.75□□□□□ -0.69
CNOT4-212ENST00000541284 AKT1S1Q96B36 256 aa10.75□□□□□ -0.69
CNOT4-212ENST00000541284 BRMS1Q9HCU9 246 aa10.75□□□□□ -0.69
CNOT4-212ENST00000541284 ARPP21Q9UBL0 812 aaPredicted RBP10.75□□□□□ -0.69
CNOT4-212ENST00000541284 USP21Q9UK80 565 aa10.75□□□□□ -0.69
CNOT4-212ENST00000541284 TFR2Q9UP52 801 aa10.75□□□□□ -0.69
CNOT4-212ENST00000541284 HNRNPH2P55795 449 aaKnown RBP10.75□□□□□ -0.69
CNOT4-212ENST00000541284 C12orf60Q5U649 245 aa10.75□□□□□ -0.69
CNOT4-212ENST00000541284 TAF3Q5VWG9 929 aa10.75□□□□□ -0.69
CNOT4-212ENST00000541284 CYP26C1Q6V0L0 522 aa10.75□□□□□ -0.69
CNOT4-212ENST00000541284 TRAPPC11Q7Z392 1133 aa10.75□□□□□ -0.69
CNOT4-212ENST00000541284 NEK11Q8NG66 645 aa10.75□□□□□ -0.69
CNOT4-212ENST00000541284 ARHGEF1Q92888 912 aaKnown RBP10.75□□□□□ -0.69
CNOT4-212ENST00000541284 TFCP2L1Q9NZI6 479 aa10.75□□□□□ -0.69
CNOT4-212ENST00000541284 AFF2P51816 1311 aa10.75□□□□□ -0.69
CNOT4-212ENST00000541284 ZC3H4Q9UPT8 1303 aaKnown RBP10.75□□□□□ -0.69
CNOT4-212ENST00000541284 RCCD1A6NED2 376 aa10.75□□□□□ -0.69
CNOT4-212ENST00000541284 STXBP3O00186 592 aa10.75□□□□□ -0.69
CNOT4-212ENST00000541284 RHOBTB3O94955 611 aa10.75□□□□□ -0.69
CNOT4-212ENST00000541284 HOXA10P31260 410 aaPredicted RBP10.75□□□□□ -0.69
CNOT4-212ENST00000541284 FILIP1LQ4L180 1135 aa10.75□□□□□ -0.69
CNOT4-212ENST00000541284 JAKMIP3Q5VZ66 844 aa10.75□□□□□ -0.69
CNOT4-212ENST00000541284 CEP112Q8N8E3 955 aa10.75□□□□□ -0.69
CNOT4-212ENST00000541284 GIMAP8Q8ND71 665 aaPredicted RBP10.75□□□□□ -0.69
CNOT4-212ENST00000541284 SLF1Q9BQI6 1058 aa10.75□□□□□ -0.69
CNOT4-212ENST00000541284 ABCB6Q9NP58 842 aa10.75□□□□□ -0.69
CNOT4-212ENST00000541284 MYO1AQ9UBC5 1043 aa10.75□□□□□ -0.69
CNOT4-212ENST00000541284 A0A1W2PQC6 194 aa10.74□□□□□ -0.69
CNOT4-212ENST00000541284 NDUFA10O95299 355 aa10.74□□□□□ -0.69
CNOT4-212ENST00000541284 KRT9P35527 623 aa10.74□□□□□ -0.69
CNOT4-212ENST00000541284 SPAG1Q07617 926 aa10.74□□□□□ -0.69
CNOT4-212ENST00000541284 TUBB2AQ13885 445 aa10.74□□□□□ -0.69
CNOT4-212ENST00000541284 TRIM14Q14142 442 aa10.74□□□□□ -0.69
CNOT4-212ENST00000541284 ZNF662Q6ZS27 426 aa10.74□□□□□ -0.69
CNOT4-212ENST00000541284 NAPGQ99747 312 aaPredicted RBP10.74□□□□□ -0.69
CNOT4-212ENST00000541284 TUBB2BQ9BVA1 445 aa10.74□□□□□ -0.69
CNOT4-212ENST00000541284 CCSER1Q9C0I3 900 aa10.74□□□□□ -0.69
CNOT4-212ENST00000541284 COL4A5P29400 1685 aa10.74□□□□□ -0.69
CNOT4-212ENST00000541284 CTAGE9A4FU28 777 aa10.74□□□□□ -0.69
CNOT4-212ENST00000541284 PSMD14O00487 310 aa10.74□□□□□ -0.69
CNOT4-212ENST00000541284 EDIL3O43854 480 aa10.74□□□□□ -0.69
CNOT4-212ENST00000541284 HSPA1LP34931 641 aa10.74□□□□□ -0.69
CNOT4-212ENST00000541284 DYNLL2Q96FJ2 89 aa10.74□□□□□ -0.69
CNOT4-212ENST00000541284 CRNKL1Q9BZJ0 848 aaKnown RBP10.74□□□□□ -0.69
CNOT4-212ENST00000541284 CAPN11Q9UMQ6 739 aa10.74□□□□□ -0.69
CNOT4-212ENST00000541284 H7C1D1 291 aa10.74□□□□□ -0.69
CNOT4-212ENST00000541284 N4BP1O75113 896 aaKnown RBP10.74□□□□□ -0.69
CNOT4-212ENST00000541284 KCNQ4P56696 695 aa10.74□□□□□ -0.69
CNOT4-212ENST00000541284 WHAMMP3Q1A5X7 153 aa10.74□□□□□ -0.69
CNOT4-212ENST00000541284 MIIPQ5JXC2 388 aa10.74□□□□□ -0.69
CNOT4-212ENST00000541284 NCAPH2Q6IBW4 605 aa10.74□□□□□ -0.69
CNOT4-212ENST00000541284 DGKHQ86XP1 1220 aa10.74□□□□□ -0.69
CNOT4-212ENST00000541284 PYM1Q9BRP8 204 aaKnown RBP10.74□□□□□ -0.69
CNOT4-212ENST00000541284 PODXL2Q9NZ53 605 aa10.74□□□□□ -0.69
CNOT4-212ENST00000541284 PALM3A6NDB9 673 aaPredicted RBP10.73□□□□□ -0.69
CNOT4-212ENST00000541284 KLK7P49862 253 aa10.73□□□□□ -0.69
CNOT4-212ENST00000541284 PURBQ96QR8 312 aaKnown RBP10.73□□□□□ -0.69
CNOT4-212ENST00000541284 ZNF652Q9Y2D9 606 aa10.73□□□□□ -0.69
CNOT4-212ENST00000541284 EPN1Q9Y6I3 576 aaPredicted RBP10.73□□□□□ -0.69
CNOT4-212ENST00000541284 PHIPQ8WWQ0 1821 aa10.73□□□□□ -0.69
CNOT4-212ENST00000541284 SRGNP10124 158 aa10.73□□□□□ -0.69
CNOT4-212ENST00000541284 PNMA1Q8ND90 353 aa10.73□□□□□ -0.69
CNOT4-212ENST00000541284 MMTAG2Q9BU76 263 aaKnown RBP10.73□□□□□ -0.69
CNOT4-212ENST00000541284 THAP9Q9H5L6 903 aa10.73□□□□□ -0.69
CNOT4-212ENST00000541284 RMND1Q9NWS8 449 aa10.73□□□□□ -0.69
CNOT4-212ENST00000541284 PSD3Q9NYI0 1048 aa10.73□□□□□ -0.69
CNOT4-212ENST00000541284 USP17L3A6NCW0 530 aa10.72□□□□□ -0.69
CNOT4-212ENST00000541284 USP17L4A6NCW7 530 aa10.72□□□□□ -0.69
CNOT4-212ENST00000541284 CAPN2P17655 700 aa10.72□□□□□ -0.69
CNOT4-212ENST00000541284 HIBADHP31937 336 aaKnown RBP10.72□□□□□ -0.69
CNOT4-212ENST00000541284 RPS8P62241 208 aaKnown RBP10.72□□□□□ -0.69
CNOT4-212ENST00000541284 TFAP4Q01664 338 aa10.72□□□□□ -0.69
CNOT4-212ENST00000541284 MUM1L1Q5H9M0 696 aa10.72□□□□□ -0.69
CNOT4-212ENST00000541284 SLC27A3Q5K4L6 730 aa10.72□□□□□ -0.69
CNOT4-212ENST00000541284 WDR93Q6P2C0 686 aa10.72□□□□□ -0.69
CNOT4-212ENST00000541284 USP17L1Q7RTZ2 530 aa10.72□□□□□ -0.69
CNOT4-212ENST00000541284 NUP88Q99567 741 aaPredicted RBP10.72□□□□□ -0.69
CNOT4-212ENST00000541284 TCP11L1Q9NUJ3 509 aa10.72□□□□□ -0.69
CNOT4-212ENST00000541284 BARHL2Q9NY43 387 aa10.72□□□□□ -0.69
CNOT4-212ENST00000541284 HDAC6Q9UBN7 1215 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms