RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 PDE4BQ07343 736 aa7.99□□□□□ -1.13
SUDS3-202ENST00000541280 TNS3Q68CZ2 1445 aa7.99□□□□□ -1.13
SUDS3-202ENST00000541280 TLR6Q9Y2C9 796 aa7.99□□□□□ -1.13
SUDS3-202ENST00000541280 ST14Q9Y5Y6 855 aa7.99□□□□□ -1.13
SUDS3-202ENST00000541280 CDK12Q9NYV4 1490 aaPredicted RBP7.99□□□□□ -1.13
SUDS3-202ENST00000541280 ACEP12821 1306 aa7.99□□□□□ -1.13
SUDS3-202ENST00000541280 POLR3AO14802 1390 aaPredicted RBP7.98□□□□□ -1.13
SUDS3-202ENST00000541280 IFT172Q9UG01 1749 aa7.98□□□□□ -1.13
SUDS3-202ENST00000541280 SORBS3O60504 671 aa7.98□□□□□ -1.13
SUDS3-202ENST00000541280 PGRP06401 933 aa7.98□□□□□ -1.13
SUDS3-202ENST00000541280 LMNB2Q03252 620 aa7.98□□□□□ -1.13
SUDS3-202ENST00000541280 MCATQ8IVS2 390 aaKnown RBP7.98□□□□□ -1.13
SUDS3-202ENST00000541280 TMEM87BQ96K49 555 aa7.98□□□□□ -1.13
SUDS3-202ENST00000541280 HSPA12BQ96MM6 686 aa7.98□□□□□ -1.13
SUDS3-202ENST00000541280 FAM161BQ96MY7 647 aa7.98□□□□□ -1.13
SUDS3-202ENST00000541280 TULP4Q9NRJ4 1543 aa7.98□□□□□ -1.13
SUDS3-202ENST00000541280 KNDC1Q76NI1 1749 aa7.98□□□□□ -1.13
SUDS3-202ENST00000541280 NALCNQ8IZF0 1738 aa7.98□□□□□ -1.13
SUDS3-202ENST00000541280 FAM221AA4D161 298 aa7.97□□□□□ -1.13
SUDS3-202ENST00000541280 FAM83GA6ND36 823 aa7.97□□□□□ -1.13
SUDS3-202ENST00000541280 CILPO75339 1184 aa7.97□□□□□ -1.13
SUDS3-202ENST00000541280 CYP7A1P22680 504 aa7.97□□□□□ -1.13
SUDS3-202ENST00000541280 VPS72Q15906 364 aa7.97□□□□□ -1.13
SUDS3-202ENST00000541280 TMEM40Q8WWA1 233 aa7.97□□□□□ -1.13
SUDS3-202ENST00000541280 RHOVQ96L33 236 aa7.97□□□□□ -1.13
SUDS3-202ENST00000541280 RSRP1Q9BUV0 290 aa7.97□□□□□ -1.13
SUDS3-202ENST00000541280 ADGRB2O60241 1585 aa7.97□□□□□ -1.13
SUDS3-202ENST00000541280 SBNO2Q9Y2G9 1366 aa7.97□□□□□ -1.13
SUDS3-202ENST00000541280 NHSL1Q5SYE7 1610 aa7.96□□□□□ -1.13
SUDS3-202ENST00000541280 SHPRHQ149N8 1683 aa7.96□□□□□ -1.13
SUDS3-202ENST00000541280 FAM155AB1AL88 458 aaPredicted RBP7.96□□□□□ -1.14
SUDS3-202ENST00000541280 CCDC27Q2M243 656 aa7.96□□□□□ -1.14
SUDS3-202ENST00000541280 TMEM201Q5SNT2 666 aa7.96□□□□□ -1.14
SUDS3-202ENST00000541280 DNAJB8Q8NHS0 232 aa7.96□□□□□ -1.14
SUDS3-202ENST00000541280 FAM168AQ92567 244 aa7.96□□□□□ -1.14
SUDS3-202ENST00000541280 ACSF2Q96CM8 615 aaPredicted RBP7.96□□□□□ -1.14
SUDS3-202ENST00000541280 PCGF6Q9BYE7 350 aa7.96□□□□□ -1.14
SUDS3-202ENST00000541280 KRTAP9-9Q9BYP9 154 aa7.96□□□□□ -1.14
SUDS3-202ENST00000541280 KRTAP9-4Q9BYQ2 154 aa7.96□□□□□ -1.14
SUDS3-202ENST00000541280 PRDM7Q9NQW5 492 aa7.96□□□□□ -1.14
SUDS3-202ENST00000541280 CTNND2Q9UQB3 1225 aa7.96□□□□□ -1.14
SUDS3-202ENST00000541280 TAGLNQ01995 201 aaKnown RBP7.95□□□□□ -1.14
SUDS3-202ENST00000541280 CAMK2GQ13555 558 aaPredicted RBP7.95□□□□□ -1.14
SUDS3-202ENST00000541280 DIEXFQ68CQ4 756 aaKnown RBP7.95□□□□□ -1.14
SUDS3-202ENST00000541280 KCNH5Q8NCM2 988 aa7.95□□□□□ -1.14
SUDS3-202ENST00000541280 PIWIL2Q8TC59 973 aaKnown RBP7.95□□□□□ -1.14
SUDS3-202ENST00000541280 GATAD2BQ8WXI9 593 aa7.95□□□□□ -1.14
SUDS3-202ENST00000541280 PRDM11Q9NQV5 511 aa7.95□□□□□ -1.14
SUDS3-202ENST00000541280 BCL9LQ86UU0 1499 aa7.94□□□□□ -1.14
SUDS3-202ENST00000541280 BTBD11A6QL63 1104 aa7.94□□□□□ -1.14
SUDS3-202ENST00000541280 GCP02774 474 aa7.94□□□□□ -1.14
SUDS3-202ENST00000541280 ETV3P41162 512 aa7.94□□□□□ -1.14
SUDS3-202ENST00000541280 EVA1CP58658 441 aa7.94□□□□□ -1.14
SUDS3-202ENST00000541280 BNC2Q6ZN30 1099 aaPredicted RBP7.94□□□□□ -1.14
SUDS3-202ENST00000541280 HDGFL2Q7Z4V5 671 aaPredicted RBP7.94□□□□□ -1.14
SUDS3-202ENST00000541280 XAGE3Q8WTP9 111 aa7.94□□□□□ -1.14
SUDS3-202ENST00000541280 JARID2Q92833 1246 aaPredicted RBP7.94□□□□□ -1.14
SUDS3-202ENST00000541280 ATP13A1Q9HD20 1204 aa7.94□□□□□ -1.14
SUDS3-202ENST00000541280 BTG4Q9NY30 223 aa7.94□□□□□ -1.14
SUDS3-202ENST00000541280 TERF2IPQ9NYB0 399 aa7.94□□□□□ -1.14
SUDS3-202ENST00000541280 CCDC9Q9Y3X0 531 aaKnown RBP7.94□□□□□ -1.14
SUDS3-202ENST00000541280 TTC21AQ8NDW8 1320 aa7.94□□□□□ -1.14
SUDS3-202ENST00000541280 ATRNO75882 1429 aa7.94□□□□□ -1.14
SUDS3-202ENST00000541280 PPIP5K1Q6PFW1 1433 aa7.94□□□□□ -1.14
SUDS3-202ENST00000541280 ATP7BP35670 1465 aa7.94□□□□□ -1.14
SUDS3-202ENST00000541280 KIF1AQ12756 1690 aa7.93□□□□□ -1.14
SUDS3-202ENST00000541280 KIAA1210Q9ULL0 1709 aa7.93□□□□□ -1.14
SUDS3-202ENST00000541280 H3BS24 57 aa7.93□□□□□ -1.14
SUDS3-202ENST00000541280 PF4P02776 101 aa7.93□□□□□ -1.14
SUDS3-202ENST00000541280 TMF1P82094 1093 aa7.93□□□□□ -1.14
SUDS3-202ENST00000541280 TNK2Q07912 1038 aa7.93□□□□□ -1.14
SUDS3-202ENST00000541280 PWP1Q13610 501 aa7.93□□□□□ -1.14
SUDS3-202ENST00000541280 CDKAL1Q5VV42 579 aa7.93□□□□□ -1.14
SUDS3-202ENST00000541280 CDH24Q86UP0 819 aa7.93□□□□□ -1.14
SUDS3-202ENST00000541280 PPP1R13LQ8WUF5 828 aa7.93□□□□□ -1.14
SUDS3-202ENST00000541280 TMEM74Q96NL1 305 aa7.93□□□□□ -1.14
SUDS3-202ENST00000541280 DPH2Q9BQC3 489 aaPredicted RBP7.93□□□□□ -1.14
SUDS3-202ENST00000541280 CARS2Q9HA77 564 aaKnown RBP7.93□□□□□ -1.14
SUDS3-202ENST00000541280 MRS2Q9HD23 443 aa7.93□□□□□ -1.14
SUDS3-202ENST00000541280 SLIT2O94813 1529 aa7.93□□□□□ -1.14
SUDS3-202ENST00000541280 FMN2Q9NZ56 1722 aa7.92□□□□□ -1.14
SUDS3-202ENST00000541280 ST20-MTHFSA0A0A6YYL1 179 aa7.92□□□□□ -1.14
SUDS3-202ENST00000541280 CBX7O95931 251 aa7.92□□□□□ -1.14
SUDS3-202ENST00000541280 F13A1P00488 732 aa7.92□□□□□ -1.14
SUDS3-202ENST00000541280 C8AP07357 584 aa7.92□□□□□ -1.14
SUDS3-202ENST00000541280 ZSWIM9Q86XI8 627 aa7.92□□□□□ -1.14
SUDS3-202ENST00000541280 CYB5D2Q8WUJ1 264 aa7.92□□□□□ -1.14
SUDS3-202ENST00000541280 C19orf73Q9NVV2 129 aa7.92□□□□□ -1.14
SUDS3-202ENST00000541280 VTI1BQ9UEU0 232 aa7.92□□□□□ -1.14
SUDS3-202ENST00000541280 CEP131Q9UPN4 1083 aa7.92□□□□□ -1.14
SUDS3-202ENST00000541280 CORINQ9Y5Q5 1042 aa7.92□□□□□ -1.14
SUDS3-202ENST00000541280 TTC21BQ7Z4L5 1316 aa7.92□□□□□ -1.14
SUDS3-202ENST00000541280 NINLQ9Y2I6 1382 aa7.92□□□□□ -1.14
SUDS3-202ENST00000541280 BPNT1O95861 308 aa7.91□□□□□ -1.14
SUDS3-202ENST00000541280 ZC3H6P61129 1189 aaKnown RBP7.91□□□□□ -1.14
SUDS3-202ENST00000541280 ERMP1Q7Z2K6 904 aa7.91□□□□□ -1.14
SUDS3-202ENST00000541280 RELL1Q8IUW5 271 aa7.91□□□□□ -1.14
SUDS3-202ENST00000541280 SLFN12Q8IYM2 578 aa7.91□□□□□ -1.14
SUDS3-202ENST00000541280 Q96M66 194 aa7.91□□□□□ -1.14
SUDS3-202ENST00000541280 TESK2Q96S53 571 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms