RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 OAZ1P54368 228 aa8.76□□□□□ -1.01
YBX3-209ENST00000540747 CCDC144BQ3MJ40 725 aa8.76□□□□□ -1.01
YBX3-209ENST00000540747 PSRC1Q6PGN9 363 aaPredicted RBP8.76□□□□□ -1.01
YBX3-209ENST00000540747 ZNF365Q70YC5 407 aa8.76□□□□□ -1.01
YBX3-209ENST00000540747 ARMCX2Q7L311 632 aa8.76□□□□□ -1.01
YBX3-209ENST00000540747 AMOTL1Q8IY63 956 aa8.76□□□□□ -1.01
YBX3-209ENST00000540747 FAM133AQ8N9E0 248 aa8.76□□□□□ -1.01
YBX3-209ENST00000540747 PCSK9Q8NBP7 692 aaKnown RBP8.76□□□□□ -1.01
YBX3-209ENST00000540747 CHST13Q8NET6 341 aa8.76□□□□□ -1.01
YBX3-209ENST00000540747 ATXN2LQ8WWM7 1075 aaKnown RBP8.76□□□□□ -1.01
YBX3-209ENST00000540747 HERVK_113Q902F9 699 aa8.76□□□□□ -1.01
YBX3-209ENST00000540747 GLT1D1Q96MS3 346 aa8.76□□□□□ -1.01
YBX3-209ENST00000540747 CXXC1Q9P0U4 656 aaPredicted RBP8.76□□□□□ -1.01
YBX3-209ENST00000540747 GNEQ9Y223 722 aaKnown RBP8.76□□□□□ -1.01
YBX3-209ENST00000540747 GRIN2DO15399 1336 aa8.76□□□□□ -1.01
YBX3-209ENST00000540747 PIEZO1Q92508 2521 aa8.76□□□□□ -1.01
YBX3-209ENST00000540747 C6orf222P0C671 652 aaPredicted RBP8.75□□□□□ -1.01
YBX3-209ENST00000540747 CCDC174Q6PII3 467 aa8.75□□□□□ -1.01
YBX3-209ENST00000540747 CCDC144CPQ8IYA2 1237 aa8.75□□□□□ -1.01
YBX3-209ENST00000540747 GMCL1P1Q8NEA9 526 aa8.75□□□□□ -1.01
YBX3-209ENST00000540747 OSBP2Q969R2 916 aa8.75□□□□□ -1.01
YBX3-209ENST00000540747 DDX11Q96FC9 970 aa8.75□□□□□ -1.01
YBX3-209ENST00000540747 ASB2Q96Q27 587 aa8.75□□□□□ -1.01
YBX3-209ENST00000540747 PRDM12Q9H4Q4 367 aa8.75□□□□□ -1.01
YBX3-209ENST00000540747 RAVER2Q9HCJ3 691 aaKnown RBP8.75□□□□□ -1.01
YBX3-209ENST00000540747 IL23AQ9NPF7 189 aa8.75□□□□□ -1.01
YBX3-209ENST00000540747 MTMR4Q9NYA4 1195 aa8.75□□□□□ -1.01
YBX3-209ENST00000540747 FBXO40Q9UH90 709 aa8.75□□□□□ -1.01
YBX3-209ENST00000540747 FEM1BQ9UK73 627 aa8.75□□□□□ -1.01
YBX3-209ENST00000540747 YBX2Q9Y2T7 364 aaKnown RBP8.75□□□□□ -1.01
YBX3-209ENST00000540747 ZNF536O15090 1300 aa8.75□□□□□ -1.01
YBX3-209ENST00000540747 UMODL1Q5DID0 1318 aa8.75□□□□□ -1.01
YBX3-209ENST00000540747 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.74□□□□□ -1.01
YBX3-209ENST00000540747 SOWAHBA6NEL2 793 aa8.74□□□□□ -1.01
YBX3-209ENST00000540747 ZBED4O75132 1171 aa8.74□□□□□ -1.01
YBX3-209ENST00000540747 ACRP10323 421 aa8.74□□□□□ -1.01
YBX3-209ENST00000540747 CYP2C18P33260 490 aa8.74□□□□□ -1.01
YBX3-209ENST00000540747 HNRNPUQ00839 825 aaKnown RBP eCLIP8.74□□□□□ -1.01
YBX3-209ENST00000540747 CNTN2Q02246 1040 aa8.74□□□□□ -1.01
YBX3-209ENST00000540747 GNASQ5JWF2 1037 aa8.74□□□□□ -1.01
YBX3-209ENST00000540747 ZSCAN25Q6NSZ9 544 aa8.74□□□□□ -1.01
YBX3-209ENST00000540747 CPXCR1Q8N123 301 aa8.74□□□□□ -1.01
YBX3-209ENST00000540747 TMEM199Q8N511 208 aa8.74□□□□□ -1.01
YBX3-209ENST00000540747 KBTBD3Q8NAB2 608 aa8.74□□□□□ -1.01
YBX3-209ENST00000540747 CEP95Q96GE4 821 aa8.74□□□□□ -1.01
YBX3-209ENST00000540747 DDRGK1Q96HY6 314 aa8.74□□□□□ -1.01
YBX3-209ENST00000540747 YTHDC1Q96MU7 727 aaKnown RBP8.74□□□□□ -1.01
YBX3-209ENST00000540747 NOC4LQ9BVI4 516 aaKnown RBP8.74□□□□□ -1.01
YBX3-209ENST00000540747 PPP1R12CQ9BZL4 782 aa8.74□□□□□ -1.01
YBX3-209ENST00000540747 WNT8AQ9H1J5 351 aa8.74□□□□□ -1.01
YBX3-209ENST00000540747 A1CFQ9NQ94 594 aaKnown RBP8.74□□□□□ -1.01
YBX3-209ENST00000540747 THEGQ9P2T0 379 aa8.74□□□□□ -1.01
YBX3-209ENST00000540747 CLIP2Q9UDT6 1046 aa8.74□□□□□ -1.01
YBX3-209ENST00000540747 DDX19BQ9UMR2 479 aa8.74□□□□□ -1.01
YBX3-209ENST00000540747 RAD21O60216 631 aa8.73□□□□□ -1.01
YBX3-209ENST00000540747 PLA2G6O60733 806 aa8.73□□□□□ -1.01
YBX3-209ENST00000540747 CABYRO75952 493 aa8.73□□□□□ -1.01
YBX3-209ENST00000540747 FDX1P10109 184 aa8.73□□□□□ -1.01
YBX3-209ENST00000540747 MS4A1P11836 297 aa8.73□□□□□ -1.01
YBX3-209ENST00000540747 COL9A1P20849 921 aa8.73□□□□□ -1.01
YBX3-209ENST00000540747 PTGS1P23219 599 aa8.73□□□□□ -1.01
YBX3-209ENST00000540747 BEX3Q00994 111 aa8.73□□□□□ -1.01
YBX3-209ENST00000540747 RAB30Q15771 203 aa8.73□□□□□ -1.01
YBX3-209ENST00000540747 ANKRD35Q8N283 1001 aa8.73□□□□□ -1.01
YBX3-209ENST00000540747 NEDD1Q8NHV4 660 aa8.73□□□□□ -1.01
YBX3-209ENST00000540747 ADAMTS19Q8TE59 1207 aa8.73□□□□□ -1.01
YBX3-209ENST00000540747 MORC4Q8TE76 937 aa8.73□□□□□ -1.01
YBX3-209ENST00000540747 APPBP2Q92624 585 aa8.73□□□□□ -1.01
YBX3-209ENST00000540747 KIFC2Q96AC6 838 aa8.73□□□□□ -1.01
YBX3-209ENST00000540747 GMCL1Q96IK5 515 aa8.73□□□□□ -1.01
YBX3-209ENST00000540747 GAS2L1Q99501 681 aaPredicted RBP8.73□□□□□ -1.01
YBX3-209ENST00000540747 SEZ6LQ9BYH1 1024 aa8.73□□□□□ -1.01
YBX3-209ENST00000540747 ACAD9Q9H845 621 aa8.73□□□□□ -1.01
YBX3-209ENST00000540747 SPC25Q9HBM1 224 aa8.73□□□□□ -1.01
YBX3-209ENST00000540747 COG6Q9Y2V7 657 aa8.73□□□□□ -1.01
YBX3-209ENST00000540747 GTF3C3Q9Y5Q9 886 aa8.73□□□□□ -1.01
YBX3-209ENST00000540747 LCTP09848 1927 aa8.73□□□□□ -1.01
YBX3-209ENST00000540747 MYH4Q9Y623 1939 aa8.73□□□□□ -1.01
YBX3-209ENST00000540747 PRRC2BQ5JSZ5 2229 aaKnown RBP8.72□□□□□ -1.01
YBX3-209ENST00000540747 FOXP2O15409 715 aa8.72□□□□□ -1.01
YBX3-209ENST00000540747 TLR3O15455 904 aaKnown RBP8.72□□□□□ -1.01
YBX3-209ENST00000540747 RNF113AO15541 343 aaKnown RBP8.72□□□□□ -1.01
YBX3-209ENST00000540747 GPAA1O43292 621 aa8.72□□□□□ -1.01
YBX3-209ENST00000540747 SMARCA5O60264 1052 aaPredicted RBP8.72□□□□□ -1.01
YBX3-209ENST00000540747 PRDM1O75626 825 aa8.72□□□□□ -1.01
YBX3-209ENST00000540747 TTLL1O95922 423 aa8.72□□□□□ -1.01
YBX3-209ENST00000540747 BMP3P12645 472 aa8.72□□□□□ -1.01
YBX3-209ENST00000540747 SMPD1P17405 629 aa8.72□□□□□ -1.01
YBX3-209ENST00000540747 NOVP48745 357 aa8.72□□□□□ -1.01
YBX3-209ENST00000540747 MRPS5P82675 430 aaKnown RBP8.72□□□□□ -1.01
YBX3-209ENST00000540747 TNFAIP2Q03169 654 aa8.72□□□□□ -1.01
YBX3-209ENST00000540747 FSCN1Q16658 493 aaKnown RBP8.72□□□□□ -1.01
YBX3-209ENST00000540747 TMEM63BQ5T3F8 832 aa8.72□□□□□ -1.01
YBX3-209ENST00000540747 TAPT1Q6NXT6 567 aa8.72□□□□□ -1.01
YBX3-209ENST00000540747 CXCL17Q6UXB2 119 aa8.72□□□□□ -1.01
YBX3-209ENST00000540747 CCDC129Q6ZRS4 1044 aa8.72□□□□□ -1.01
YBX3-209ENST00000540747 TLK2Q86UE8 772 aa8.72□□□□□ -1.01
YBX3-209ENST00000540747 LRRC47Q8N1G4 583 aaKnown RBP8.72□□□□□ -1.01
YBX3-209ENST00000540747 AGBL1Q96MI9 1066 aa8.72□□□□□ -1.01
YBX3-209ENST00000540747 LRRCC1Q9C099 1032 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms