RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 GPRC5AQ8NFJ5 357 aa12.31□□□□□ -0.44
ATL3-204ENST00000540699 ZNF333Q96JL9 665 aa12.31□□□□□ -0.44
ATL3-204ENST00000540699 MAP3K14Q99558 947 aa12.31□□□□□ -0.44
ATL3-204ENST00000540699 LLPHQ9BRT6 129 aaKnown RBP12.31□□□□□ -0.44
ATL3-204ENST00000540699 SLC38A10Q9HBR0 1119 aa12.31□□□□□ -0.44
ATL3-204ENST00000540699 BTBD7Q9P203 1132 aa12.31□□□□□ -0.44
ATL3-204ENST00000540699 ZNF214Q9UL59 606 aaPredicted RBP12.31□□□□□ -0.44
ATL3-204ENST00000540699 SMC3Q9UQE7 1217 aa12.31□□□□□ -0.44
ATL3-204ENST00000540699 ZDHHC9Q9Y397 364 aa12.31□□□□□ -0.44
ATL3-204ENST00000540699 PTCH2Q9Y6C5 1203 aa12.31□□□□□ -0.44
ATL3-204ENST00000540699 GOLGA8BA8MQT2 603 aa12.3□□□□□ -0.44
ATL3-204ENST00000540699 ATP2A1O14983 1001 aa12.3□□□□□ -0.44
ATL3-204ENST00000540699 DDAH1O94760 285 aa12.3□□□□□ -0.44
ATL3-204ENST00000540699 BRD1O95696 1058 aa12.3□□□□□ -0.44
ATL3-204ENST00000540699 CTGFP29279 349 aa12.3□□□□□ -0.44
ATL3-204ENST00000540699 RCAN1P53805 252 aa12.3□□□□□ -0.44
ATL3-204ENST00000540699 GRM4Q14833 912 aa12.3□□□□□ -0.44
ATL3-204ENST00000540699 ARHGEF6Q15052 776 aa12.3□□□□□ -0.44
ATL3-204ENST00000540699 CCDC96Q2M329 555 aa12.3□□□□□ -0.44
ATL3-204ENST00000540699 Q3C1V9 767 aa12.3□□□□□ -0.44
ATL3-204ENST00000540699 PRR12Q9ULL5 1215 aa12.3□□□□□ -0.44
ATL3-204ENST00000540699 PALM3A6NDB9 673 aaPredicted RBP12.29□□□□□ -0.44
ATL3-204ENST00000540699 JAK2O60674 1132 aa12.29□□□□□ -0.44
ATL3-204ENST00000540699 PEX10O60683 326 aa12.29□□□□□ -0.44
ATL3-204ENST00000540699 GNRH1P01148 92 aa12.29□□□□□ -0.44
ATL3-204ENST00000540699 PARP1P09874 1014 aaKnown RBP12.29□□□□□ -0.44
ATL3-204ENST00000540699 EN2P19622 333 aaPredicted RBP12.29□□□□□ -0.44
ATL3-204ENST00000540699 OAZ1P54368 228 aa12.29□□□□□ -0.44
ATL3-204ENST00000540699 CCT2P78371 535 aaKnown RBP12.29□□□□□ -0.44
ATL3-204ENST00000540699 TMEM132BQ14DG7 1078 aa12.29□□□□□ -0.44
ATL3-204ENST00000540699 SLC9C1Q4G0N8 1177 aa12.29□□□□□ -0.44
ATL3-204ENST00000540699 SYDE2Q5VT97 1194 aa12.29□□□□□ -0.44
ATL3-204ENST00000540699 TTBK2Q6IQ55 1244 aa12.29□□□□□ -0.44
ATL3-204ENST00000540699 CLEC17AQ6ZS10 378 aa12.29□□□□□ -0.44
ATL3-204ENST00000540699 CATIPQ7Z7H3 387 aa12.29□□□□□ -0.44
ATL3-204ENST00000540699 ZNF654Q8IZM8 581 aa12.29□□□□□ -0.44
ATL3-204ENST00000540699 SHCBP1Q8NEM2 672 aa12.29□□□□□ -0.44
ATL3-204ENST00000540699 TNPO1Q92973 898 aaKnown RBP12.29□□□□□ -0.44
ATL3-204ENST00000540699 KIFC2Q96AC6 838 aa12.29□□□□□ -0.44
ATL3-204ENST00000540699 CHMP4CQ96CF2 233 aa12.29□□□□□ -0.44
ATL3-204ENST00000540699 TRIM47Q96LD4 638 aa12.29□□□□□ -0.44
ATL3-204ENST00000540699 PAGR1Q9BTK6 254 aa12.29□□□□□ -0.44
ATL3-204ENST00000540699 ARHGAP39Q9C0H5 1083 aa12.29□□□□□ -0.44
ATL3-204ENST00000540699 SPATC1LQ9H0A9 340 aa12.29□□□□□ -0.44
ATL3-204ENST00000540699 NCOA5Q9HCD5 579 aaKnown RBP12.29□□□□□ -0.44
ATL3-204ENST00000540699 MAD2L2Q9UI95 211 aa12.29□□□□□ -0.44
ATL3-204ENST00000540699 FRMPD2Q68DX3 1309 aaPredicted RBP12.29□□□□□ -0.44
ATL3-204ENST00000540699 PLXNA1Q9UIW2 1896 aa12.28□□□□□ -0.44
ATL3-204ENST00000540699 ZBTB43O43298 467 aa12.28□□□□□ -0.44
ATL3-204ENST00000540699 DTNBO60941 627 aa12.28□□□□□ -0.44
ATL3-204ENST00000540699 PSMC4P43686 418 aa12.28□□□□□ -0.44
ATL3-204ENST00000540699 CCNA1P78396 465 aa12.28□□□□□ -0.44
ATL3-204ENST00000540699 KIF22Q14807 665 aa12.28□□□□□ -0.44
ATL3-204ENST00000540699 RIOX2Q8IUF8 465 aa12.28□□□□□ -0.44
ATL3-204ENST00000540699 STAG2Q8N3U4 1231 aa12.28□□□□□ -0.44
ATL3-204ENST00000540699 MOV10L1Q9BXT6 1211 aaKnown RBP12.28□□□□□ -0.44
ATL3-204ENST00000540699 PORCNQ9H237 461 aa12.28□□□□□ -0.44
ATL3-204ENST00000540699 RANBP17Q9H2T7 1088 aaKnown RBP12.28□□□□□ -0.44
ATL3-204ENST00000540699 GPCPD1Q9NPB8 672 aa12.28□□□□□ -0.44
ATL3-204ENST00000540699 FAM217BQ9NTX9 383 aaPredicted RBP12.28□□□□□ -0.44
ATL3-204ENST00000540699 MTMR7Q9Y216 660 aa12.28□□□□□ -0.44
ATL3-204ENST00000540699 PTPDC1A2A3K4 754 aa12.27□□□□□ -0.45
ATL3-204ENST00000540699 CCDC69A6NI79 296 aa12.27□□□□□ -0.45
ATL3-204ENST00000540699 ZBED4O75132 1171 aa12.27□□□□□ -0.45
ATL3-204ENST00000540699 GOLGA8HP0CJ92 632 aa12.27□□□□□ -0.45
ATL3-204ENST00000540699 CALM1P0DP23 149 aa12.27□□□□□ -0.45
ATL3-204ENST00000540699 CALM2P0DP24 149 aa12.27□□□□□ -0.45
ATL3-204ENST00000540699 CALM3P0DP25 149 aa12.27□□□□□ -0.45
ATL3-204ENST00000540699 SYT1P21579 422 aa12.27□□□□□ -0.45
ATL3-204ENST00000540699 MAPK4P31152 587 aa12.27□□□□□ -0.45
ATL3-204ENST00000540699 COPB2P35606 906 aa12.27□□□□□ -0.45
ATL3-204ENST00000540699 SLC16A2P36021 539 aa12.27□□□□□ -0.45
ATL3-204ENST00000540699 METAP2P50579 478 aaKnown RBP eCLIP12.27□□□□□ -0.45
ATL3-204ENST00000540699 FCGRTP55899 365 aa12.27□□□□□ -0.45
ATL3-204ENST00000540699 HMGN5P82970 282 aaKnown RBP12.27□□□□□ -0.45
ATL3-204ENST00000540699 SLC35G1Q2M3R5 365 aa12.27□□□□□ -0.45
ATL3-204ENST00000540699 NFXL1Q6ZNB6 911 aa12.27□□□□□ -0.45
ATL3-204ENST00000540699 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.27□□□□□ -0.45
ATL3-204ENST00000540699 NBPF11Q86T75 865 aa12.27□□□□□ -0.45
ATL3-204ENST00000540699 RAB11FIP4Q86YS3 637 aa12.27□□□□□ -0.45
ATL3-204ENST00000540699 MTMR8Q96EF0 704 aa12.27□□□□□ -0.45
ATL3-204ENST00000540699 TMEM106CQ9BVX2 250 aa12.27□□□□□ -0.45
ATL3-204ENST00000540699 TEX13BQ9BXU2 312 aa12.27□□□□□ -0.45
ATL3-204ENST00000540699 SLC12A7Q9Y666 1083 aa12.27□□□□□ -0.45
ATL3-204ENST00000540699 ZNF536O15090 1300 aa12.27□□□□□ -0.45
ATL3-204ENST00000540699 GOLGA8AA7E2F4 631 aa12.26□□□□□ -0.45
ATL3-204ENST00000540699 KLRF2D3W0D1 207 aa12.26□□□□□ -0.45
ATL3-204ENST00000540699 STX6O43752 255 aa12.26□□□□□ -0.45
ATL3-204ENST00000540699 SLC25A27O95847 323 aa12.26□□□□□ -0.45
ATL3-204ENST00000540699 SMARCA1P28370 1054 aa12.26□□□□□ -0.45
ATL3-204ENST00000540699 CDC27P30260 824 aa12.26□□□□□ -0.45
ATL3-204ENST00000540699 STAT3P40763 770 aa12.26□□□□□ -0.45
ATL3-204ENST00000540699 FXR1P51114 621 aaKnown RBP eCLIP12.26□□□□□ -0.45
ATL3-204ENST00000540699 PRMT2P55345 433 aa12.26□□□□□ -0.45
ATL3-204ENST00000540699 IKQ13123 557 aaPredicted RBP12.26□□□□□ -0.45
ATL3-204ENST00000540699 NFKBIBQ15653 356 aa12.26□□□□□ -0.45
ATL3-204ENST00000540699 NTRK3Q16288 839 aa12.26□□□□□ -0.45
ATL3-204ENST00000540699 MICU3Q86XE3 530 aa12.26□□□□□ -0.45
ATL3-204ENST00000540699 SH3TC2Q8TF17 1288 aa12.26□□□□□ -0.45
ATL3-204ENST00000540699 MYL10Q9BUA6 226 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms