RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 CST5P28325 142 aaPredicted RBP10.73□□□□□ -0.69
TRAPPC1-202ENST00000540486 PTPN5P54829 565 aa10.73□□□□□ -0.69
TRAPPC1-202ENST00000540486 OS9Q13438 667 aaPredicted RBP10.73□□□□□ -0.69
TRAPPC1-202ENST00000540486 ZYXQ15942 572 aaKnown RBP10.73□□□□□ -0.69
TRAPPC1-202ENST00000540486 KRT40Q6A162 431 aa10.73□□□□□ -0.69
TRAPPC1-202ENST00000540486 ERMP1Q7Z2K6 904 aa10.73□□□□□ -0.69
TRAPPC1-202ENST00000540486 MB21D1Q8N884 522 aa10.73□□□□□ -0.69
TRAPPC1-202ENST00000540486 RHPN1Q8TCX5 695 aa10.73□□□□□ -0.69
TRAPPC1-202ENST00000540486 VTI1AQ96AJ9 217 aa10.73□□□□□ -0.69
TRAPPC1-202ENST00000540486 DBNDD2Q9BQY9 259 aa10.73□□□□□ -0.69
TRAPPC1-202ENST00000540486 CCDC8Q9H0W5 538 aaPredicted RBP10.73□□□□□ -0.69
TRAPPC1-202ENST00000540486 SMCHD1A6NHR9 2005 aa10.73□□□□□ -0.69
TRAPPC1-202ENST00000540486 HMMRO75330 724 aa10.72□□□□□ -0.69
TRAPPC1-202ENST00000540486 GH2P01242 217 aa10.72□□□□□ -0.69
TRAPPC1-202ENST00000540486 CD4P01730 458 aa10.72□□□□□ -0.69
TRAPPC1-202ENST00000540486 CA3P07451 260 aa10.72□□□□□ -0.69
TRAPPC1-202ENST00000540486 RASGRF1Q13972 1273 aa10.72□□□□□ -0.69
TRAPPC1-202ENST00000540486 SHROOM1Q2M3G4 852 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC1-202ENST00000540486 PUS10Q3MIT2 529 aaKnown RBP10.72□□□□□ -0.69
TRAPPC1-202ENST00000540486 ZNF710Q8N1W2 664 aa10.72□□□□□ -0.69
TRAPPC1-202ENST00000540486 EXOC6Q8TAG9 804 aa10.72□□□□□ -0.69
TRAPPC1-202ENST00000540486 ZNF384Q8TF68 577 aa10.72□□□□□ -0.69
TRAPPC1-202ENST00000540486 NSUN4Q96CB9 384 aaKnown RBP10.72□□□□□ -0.69
TRAPPC1-202ENST00000540486 HIPK3Q9H422 1215 aa10.72□□□□□ -0.69
TRAPPC1-202ENST00000540486 RPAP3Q9H6T3 665 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC1-202ENST00000540486 DCTPP1Q9H773 170 aa10.72□□□□□ -0.69
TRAPPC1-202ENST00000540486 CERS4Q9HA82 394 aa10.72□□□□□ -0.69
TRAPPC1-202ENST00000540486 IL1RAPL2Q9NP60 686 aa10.72□□□□□ -0.69
TRAPPC1-202ENST00000540486 DBNLQ9UJU6 430 aaKnown RBP10.72□□□□□ -0.69
TRAPPC1-202ENST00000540486 FAM184BQ9ULE4 1060 aa10.72□□□□□ -0.69
TRAPPC1-202ENST00000540486 CNPY2Q9Y2B0 182 aa10.72□□□□□ -0.69
TRAPPC1-202ENST00000540486 SYNRGQ9UMZ2 1314 aa10.72□□□□□ -0.69
TRAPPC1-202ENST00000540486 EPOPA6NHQ4 379 aa10.71□□□□□ -0.69
TRAPPC1-202ENST00000540486 ZBBXA8MT70 800 aa10.71□□□□□ -0.69
TRAPPC1-202ENST00000540486 RAB11FIP3O75154 756 aa10.71□□□□□ -0.69
TRAPPC1-202ENST00000540486 DUSP11O75319 330 aaKnown RBP10.71□□□□□ -0.69
TRAPPC1-202ENST00000540486 TAL1P17542 331 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC1-202ENST00000540486 GRB10Q13322 594 aa10.71□□□□□ -0.69
TRAPPC1-202ENST00000540486 HSP90AB4PQ58FF6 505 aa10.71□□□□□ -0.69
TRAPPC1-202ENST00000540486 ZNF318Q5VUA4 2279 aa10.71□□□□□ -0.69
TRAPPC1-202ENST00000540486 HFE2Q6ZVN8 426 aa10.71□□□□□ -0.69
TRAPPC1-202ENST00000540486 NCAPG2Q86XI2 1143 aa10.71□□□□□ -0.69
TRAPPC1-202ENST00000540486 ERC1Q8IUD2 1116 aa10.71□□□□□ -0.69
TRAPPC1-202ENST00000540486 MSL3Q8N5Y2 521 aaKnown RBP10.71□□□□□ -0.69
TRAPPC1-202ENST00000540486 PHOSPHO2Q8TCD6 241 aa10.71□□□□□ -0.69
TRAPPC1-202ENST00000540486 ARNTL2Q8WYA1 636 aa10.71□□□□□ -0.69
TRAPPC1-202ENST00000540486 NOL10Q9BSC4 688 aaKnown RBP10.71□□□□□ -0.69
TRAPPC1-202ENST00000540486 SEZ6LQ9BYH1 1024 aa10.71□□□□□ -0.69
TRAPPC1-202ENST00000540486 UBE2ZQ9H832 354 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC1-202ENST00000540486 SPC25Q9HBM1 224 aa10.71□□□□□ -0.69
TRAPPC1-202ENST00000540486 TLR7Q9NYK1 1049 aaKnown RBP10.71□□□□□ -0.69
TRAPPC1-202ENST00000540486 HMG20BQ9P0W2 317 aa10.71□□□□□ -0.69
TRAPPC1-202ENST00000540486 KIF28PB7ZC32 967 aa10.7□□□□□ -0.7
TRAPPC1-202ENST00000540486 GFRA3O60609 400 aa10.7□□□□□ -0.7
TRAPPC1-202ENST00000540486 BAG3O95817 575 aa10.7□□□□□ -0.7
TRAPPC1-202ENST00000540486 SLC25A27O95847 323 aa10.7□□□□□ -0.7
TRAPPC1-202ENST00000540486 HLA-DOAP06340 250 aa10.7□□□□□ -0.7
TRAPPC1-202ENST00000540486 ASGR1P07306 291 aa10.7□□□□□ -0.7
TRAPPC1-202ENST00000540486 PFKMP08237 780 aa10.7□□□□□ -0.7
TRAPPC1-202ENST00000540486 HOXB1P14653 301 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC1-202ENST00000540486 ARID4AP29374 1257 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC1-202ENST00000540486 MCAMP43121 646 aa10.7□□□□□ -0.7
TRAPPC1-202ENST00000540486 TAP1Q03518 808 aa10.7□□□□□ -0.7
TRAPPC1-202ENST00000540486 PKN1Q16512 942 aa10.7□□□□□ -0.7
TRAPPC1-202ENST00000540486 PI16Q6UXB8 463 aa10.7□□□□□ -0.7
TRAPPC1-202ENST00000540486 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC1-202ENST00000540486 SH3RF3Q8TEJ3 882 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC1-202ENST00000540486 KIF1BPQ96EK5 621 aa10.7□□□□□ -0.7
TRAPPC1-202ENST00000540486 PCDHGA4Q9Y5G9 962 aa10.7□□□□□ -0.7
TRAPPC1-202ENST00000540486 PTPRZ1P23471 2315 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC1-202ENST00000540486 BRWD1Q9NSI6 2320 aa10.69□□□□□ -0.7
TRAPPC1-202ENST00000540486 GRXCR2A6NFK2 248 aa10.69□□□□□ -0.7
TRAPPC1-202ENST00000540486 SMARCA5O60264 1052 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC1-202ENST00000540486 LPXNO60711 386 aa10.69□□□□□ -0.7
TRAPPC1-202ENST00000540486 CCL23P55773 120 aa10.69□□□□□ -0.7
TRAPPC1-202ENST00000540486 IRX6P78412 446 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC1-202ENST00000540486 PLS1Q14651 629 aa10.69□□□□□ -0.7
TRAPPC1-202ENST00000540486 RAB3GAP1Q15042 981 aa10.69□□□□□ -0.7
TRAPPC1-202ENST00000540486 ZNF792Q3KQV3 632 aa10.69□□□□□ -0.7
TRAPPC1-202ENST00000540486 GORABQ5T7V8 394 aa10.69□□□□□ -0.7
TRAPPC1-202ENST00000540486 LCE2DQ5TA82 110 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC1-202ENST00000540486 PTCRAQ6ISU1 281 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC1-202ENST00000540486 TATDN1Q6P1N9 297 aa10.69□□□□□ -0.7
TRAPPC1-202ENST00000540486 TBC1D9Q6ZT07 1266 aa10.69□□□□□ -0.7
TRAPPC1-202ENST00000540486 AACSQ86V21 672 aa10.69□□□□□ -0.7
TRAPPC1-202ENST00000540486 TGFBRAP1Q8WUH2 860 aa10.69□□□□□ -0.7
TRAPPC1-202ENST00000540486 LENG1Q96BZ8 264 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC1-202ENST00000540486 ZNF512BQ96KM6 892 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC1-202ENST00000540486 SLC9A7Q96T83 725 aa10.69□□□□□ -0.7
TRAPPC1-202ENST00000540486 UPF3BQ9BZI7 483 aaKnown RBP10.69□□□□□ -0.7
TRAPPC1-202ENST00000540486 PALD1Q9ULE6 856 aa10.69□□□□□ -0.7
TRAPPC1-202ENST00000540486 SPTBN4Q9H254 2564 aa10.69□□□□□ -0.7
TRAPPC1-202ENST00000540486 ZNF536O15090 1300 aa10.68□□□□□ -0.7
TRAPPC1-202ENST00000540486 ZFHX2Q9C0A1 2572 aaPredicted RBP10.68□□□□□ -0.7
TRAPPC1-202ENST00000540486 C6orf222P0C671 652 aaPredicted RBP10.68□□□□□ -0.7
TRAPPC1-202ENST00000540486 UQCRFS1P1P0C7P4 283 aa10.68□□□□□ -0.7
TRAPPC1-202ENST00000540486 IL9P15248 144 aa10.68□□□□□ -0.7
TRAPPC1-202ENST00000540486 PPP4CP60510 307 aa10.68□□□□□ -0.7
TRAPPC1-202ENST00000540486 KCTD2Q14681 263 aa10.68□□□□□ -0.7
TRAPPC1-202ENST00000540486 CCDC158Q5M9N0 1113 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms