RNA–Protein interactions for RNA: ENST00000539891.5

SLC3A2-215, Transcript of solute carrier family 3 member 2, humanhuman

TSL 1 (best)

Gene SLC3A2, Length 1,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-215ENST00000539891 MSL3Q8N5Y2 521 aaKnown RBP12.69□□□□□ -0.38
SLC3A2-215ENST00000539891 PNMA1Q8ND90 353 aa12.69□□□□□ -0.38
SLC3A2-215ENST00000539891 CHMP4CQ96CF2 233 aa12.69□□□□□ -0.38
SLC3A2-215ENST00000539891 DDX11Q96FC9 970 aa12.69□□□□□ -0.38
SLC3A2-215ENST00000539891 AGBL1Q96MI9 1066 aa12.69□□□□□ -0.38
SLC3A2-215ENST00000539891 TINF2Q9BSI4 451 aa12.69□□□□□ -0.38
SLC3A2-215ENST00000539891 ESYT1Q9BSJ8 1104 aa12.69□□□□□ -0.38
SLC3A2-215ENST00000539891 HTATIP2Q9BUP3 242 aa12.69□□□□□ -0.38
SLC3A2-215ENST00000539891 RANBP17Q9H2T7 1088 aaKnown RBP12.69□□□□□ -0.38
SLC3A2-215ENST00000539891 DDX20Q9UHI6 824 aaKnown RBP12.69□□□□□ -0.38
SLC3A2-215ENST00000539891 MTMR7Q9Y216 660 aa12.69□□□□□ -0.38
SLC3A2-215ENST00000539891 LCTP09848 1927 aa12.69□□□□□ -0.38
SLC3A2-215ENST00000539891 ICAM1P05362 532 aa12.68□□□□□ -0.38
SLC3A2-215ENST00000539891 NEFLP07196 543 aa12.68□□□□□ -0.38
SLC3A2-215ENST00000539891 TRDNQ13061 729 aa12.68□□□□□ -0.38
SLC3A2-215ENST00000539891 SEC23AQ15436 765 aa12.68□□□□□ -0.38
SLC3A2-215ENST00000539891 SYDE2Q5VT97 1194 aa12.68□□□□□ -0.38
SLC3A2-215ENST00000539891 MAMDC4Q6UXC1 1216 aa12.68□□□□□ -0.38
SLC3A2-215ENST00000539891 KIAA1211Q6ZU35 1233 aa12.68□□□□□ -0.38
SLC3A2-215ENST00000539891 NECAB2Q7Z6G3 386 aa12.68□□□□□ -0.38
SLC3A2-215ENST00000539891 PAWRQ96IZ0 340 aaKnown RBP12.68□□□□□ -0.38
SLC3A2-215ENST00000539891 UBAC1Q9BSL1 405 aa12.68□□□□□ -0.38
SLC3A2-215ENST00000539891 LSG1Q9H089 658 aaKnown RBP12.68□□□□□ -0.38
SLC3A2-215ENST00000539891 ACAD9Q9H845 621 aa12.68□□□□□ -0.38
SLC3A2-215ENST00000539891 KAT14Q9H8E8 782 aa12.68□□□□□ -0.38
SLC3A2-215ENST00000539891 GPCPD1Q9NPB8 672 aa12.68□□□□□ -0.38
SLC3A2-215ENST00000539891 PNMA2Q9UL42 364 aa12.68□□□□□ -0.38
SLC3A2-215ENST00000539891 FRMPD2Q68DX3 1309 aaPredicted RBP12.68□□□□□ -0.38
SLC3A2-215ENST00000539891 E7EWF7 191 aa12.67□□□□□ -0.38
SLC3A2-215ENST00000539891 SEPT4O43236 478 aa12.67□□□□□ -0.38
SLC3A2-215ENST00000539891 SLC16A2P36021 539 aa12.67□□□□□ -0.38
SLC3A2-215ENST00000539891 SLC4A3P48751 1232 aa12.67□□□□□ -0.38
SLC3A2-215ENST00000539891 CYB5R4Q7L1T6 521 aa12.67□□□□□ -0.38
SLC3A2-215ENST00000539891 ANKRD35Q8N283 1001 aa12.67□□□□□ -0.38
SLC3A2-215ENST00000539891 NCOA7Q8NI08 942 aa12.67□□□□□ -0.38
SLC3A2-215ENST00000539891 DIS3LQ8TF46 1054 aaKnown RBP12.67□□□□□ -0.38
SLC3A2-215ENST00000539891 TRERF1Q96PN7 1200 aa12.67□□□□□ -0.38
SLC3A2-215ENST00000539891 RNF146Q9NTX7 359 aa12.67□□□□□ -0.38
SLC3A2-215ENST00000539891 RBM8AQ9Y5S9 174 aaKnown RBP12.67□□□□□ -0.38
SLC3A2-215ENST00000539891 SYNGAP1Q96PV0 1343 aa12.67□□□□□ -0.38
SLC3A2-215ENST00000539891 ALAS1P13196 640 aa12.66□□□□□ -0.38
SLC3A2-215ENST00000539891 CNGA1P29973 690 aa12.66□□□□□ -0.38
SLC3A2-215ENST00000539891 SNAP25P60880 206 aa12.66□□□□□ -0.38
SLC3A2-215ENST00000539891 ASPRV1Q53RT3 343 aa12.66□□□□□ -0.38
SLC3A2-215ENST00000539891 IFIT1BQ5T764 474 aaKnown RBP12.66□□□□□ -0.38
SLC3A2-215ENST00000539891 CCDC174Q6PII3 467 aa12.66□□□□□ -0.38
SLC3A2-215ENST00000539891 STOX1Q6ZVD7 989 aa12.66□□□□□ -0.38
SLC3A2-215ENST00000539891 FAM133AQ8N9E0 248 aa12.66□□□□□ -0.38
SLC3A2-215ENST00000539891 FGD4Q96M96 766 aa12.66□□□□□ -0.38
SLC3A2-215ENST00000539891 A1CFQ9NQ94 594 aaKnown RBP12.66□□□□□ -0.38
SLC3A2-215ENST00000539891 HOMER2Q9NSB8 354 aa12.66□□□□□ -0.38
SLC3A2-215ENST00000539891 CCPG1Q9ULG6 757 aa12.66□□□□□ -0.38
SLC3A2-215ENST00000539891 TAF6LQ9Y6J9 622 aa12.66□□□□□ -0.38
SLC3A2-215ENST00000539891 PFASO15067 1338 aa12.66□□□□□ -0.38
SLC3A2-215ENST00000539891 WDR19Q8NEZ3 1342 aa12.66□□□□□ -0.38
SLC3A2-215ENST00000539891 ZNF865P0CJ78 1059 aaPredicted RBP12.65□□□□□ -0.38
SLC3A2-215ENST00000539891 COL6A1P12109 1028 aa12.65□□□□□ -0.38
SLC3A2-215ENST00000539891 MUM1L1Q5H9M0 696 aa12.65□□□□□ -0.38
SLC3A2-215ENST00000539891 PRAMEF19Q5SWL8 479 aa12.65□□□□□ -0.38
SLC3A2-215ENST00000539891 ERICH6BQ5W0A0 696 aa12.65□□□□□ -0.38
SLC3A2-215ENST00000539891 RALYLQ86SE5 291 aaKnown RBP12.65□□□□□ -0.38
SLC3A2-215ENST00000539891 DPF3Q92784 378 aa12.65□□□□□ -0.38
SLC3A2-215ENST00000539891 MTA3Q9BTC8 594 aa12.65□□□□□ -0.38
SLC3A2-215ENST00000539891 C11orf49Q9H6J7 331 aa12.65□□□□□ -0.38
SLC3A2-215ENST00000539891 BAZ2BQ9UIF8 2168 aaKnown RBP12.65□□□□□ -0.38
SLC3A2-215ENST00000539891 CDC45O75419 566 aa12.64□□□□□ -0.39
SLC3A2-215ENST00000539891 SNAI1O95863 264 aaPredicted RBP12.64□□□□□ -0.39
SLC3A2-215ENST00000539891 PARP1P09874 1014 aaKnown RBP12.64□□□□□ -0.39
SLC3A2-215ENST00000539891 GOLGA8HP0CJ92 632 aa12.64□□□□□ -0.39
SLC3A2-215ENST00000539891 SART3Q15020 963 aaKnown RBP12.64□□□□□ -0.39
SLC3A2-215ENST00000539891 NECTIN1Q15223 517 aa12.64□□□□□ -0.39
SLC3A2-215ENST00000539891 MB21D2Q8IYB1 491 aaPredicted RBP12.64□□□□□ -0.39
SLC3A2-215ENST00000539891 UBA5Q9GZZ9 404 aa12.64□□□□□ -0.39
SLC3A2-215ENST00000539891 MAF1Q9H063 256 aa12.64□□□□□ -0.39
SLC3A2-215ENST00000539891 CYP39A1Q9NYL5 469 aa12.64□□□□□ -0.39
SLC3A2-215ENST00000539891 CNPY2Q9Y2B0 182 aa12.64□□□□□ -0.39
SLC3A2-215ENST00000539891 LRRC37A2A6NM11 1700 aa12.64□□□□□ -0.39
SLC3A2-215ENST00000539891 ERICH2A1L162 156 aa12.63□□□□□ -0.39
SLC3A2-215ENST00000539891 POTEB2H3BUK9 544 aa12.63□□□□□ -0.39
SLC3A2-215ENST00000539891 DNM1LO00429 736 aa12.63□□□□□ -0.39
SLC3A2-215ENST00000539891 IFIT3O14879 490 aaKnown RBP12.63□□□□□ -0.39
SLC3A2-215ENST00000539891 SLC27A2O14975 620 aa12.63□□□□□ -0.39
SLC3A2-215ENST00000539891 TAL1P17542 331 aaPredicted RBP12.63□□□□□ -0.39
SLC3A2-215ENST00000539891 ANTXR2P58335 489 aa12.63□□□□□ -0.39
SLC3A2-215ENST00000539891 CNTN2Q02246 1040 aa12.63□□□□□ -0.39
SLC3A2-215ENST00000539891 CASC1Q6TDU7 716 aa12.63□□□□□ -0.39
SLC3A2-215ENST00000539891 ARRDC4Q8NCT1 418 aa12.63□□□□□ -0.39
SLC3A2-215ENST00000539891 ABHD16BQ9H3Z7 469 aa12.63□□□□□ -0.39
SLC3A2-215ENST00000539891 ANO2Q9NQ90 1003 aa12.63□□□□□ -0.39
SLC3A2-215ENST00000539891 NR2E3Q9Y5X4 410 aa12.63□□□□□ -0.39
SLC3A2-215ENST00000539891 LOC102724159A0A0B4J2E5 919 aa12.62□□□□□ -0.39
SLC3A2-215ENST00000539891 PALM3A6NDB9 673 aaPredicted RBP12.62□□□□□ -0.39
SLC3A2-215ENST00000539891 SOWAHBA6NEL2 793 aa12.62□□□□□ -0.39
SLC3A2-215ENST00000539891 H0YGN5 161 aa12.62□□□□□ -0.39
SLC3A2-215ENST00000539891 AKR1A1P14550 325 aa12.62□□□□□ -0.39
SLC3A2-215ENST00000539891 WTAPQ15007 396 aa12.62□□□□□ -0.39
SLC3A2-215ENST00000539891 PWP2Q15269 919 aaKnown RBP12.62□□□□□ -0.39
SLC3A2-215ENST00000539891 CREB3L3Q68CJ9 461 aa12.62□□□□□ -0.39
SLC3A2-215ENST00000539891 ARMCX2Q7L311 632 aa12.62□□□□□ -0.39
SLC3A2-215ENST00000539891 ADGRF4Q8IZF3 695 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms