RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 PMS1P54277 932 aaKnown RBP10.84□□□□□ -0.67
CDH13-204ENST00000539548 CKAP4Q07065 602 aaKnown RBP10.84□□□□□ -0.67
CDH13-204ENST00000539548 SBK1Q52WX2 424 aa10.84□□□□□ -0.67
CDH13-204ENST00000539548 TTI2Q6NXR4 508 aa10.84□□□□□ -0.67
CDH13-204ENST00000539548 DTHD1Q6ZMT9 781 aa10.84□□□□□ -0.67
CDH13-204ENST00000539548 SRLQ86TD4 932 aa10.84□□□□□ -0.67
CDH13-204ENST00000539548 CCDC170Q8IYT3 715 aa10.84□□□□□ -0.67
CDH13-204ENST00000539548 ATP8A2Q9NTI2 1148 aa10.84□□□□□ -0.67
CDH13-204ENST00000539548 KBTBD4Q9NVX7 518 aa10.84□□□□□ -0.67
CDH13-204ENST00000539548 MAGEC2Q9UBF1 373 aaPredicted RBP10.84□□□□□ -0.67
CDH13-204ENST00000539548 HDAC6Q9UBN7 1215 aa10.84□□□□□ -0.67
CDH13-204ENST00000539548 MKRN1Q9UHC7 482 aaKnown RBP10.84□□□□□ -0.67
CDH13-204ENST00000539548 NIP7Q9Y221 180 aaKnown RBP eCLIP10.84□□□□□ -0.67
CDH13-204ENST00000539548 COL4A1P02462 1669 aa10.84□□□□□ -0.67
CDH13-204ENST00000539548 SCN7AQ01118 1682 aa10.84□□□□□ -0.67
CDH13-204ENST00000539548 EIF3CLB5ME19 914 aaKnown RBP10.83□□□□□ -0.68
CDH13-204ENST00000539548 M0R2N6 131 aa10.83□□□□□ -0.68
CDH13-204ENST00000539548 ENC1O14682 589 aa10.83□□□□□ -0.68
CDH13-204ENST00000539548 CYLC1P35663 651 aaPredicted RBP10.83□□□□□ -0.68
CDH13-204ENST00000539548 CRKLP46109 303 aaKnown RBP10.83□□□□□ -0.68
CDH13-204ENST00000539548 FAM47AQ5JRC9 791 aa10.83□□□□□ -0.68
CDH13-204ENST00000539548 RCSD1Q6JBY9 416 aa10.83□□□□□ -0.68
CDH13-204ENST00000539548 KIAA1328Q86T90 577 aa10.83□□□□□ -0.68
CDH13-204ENST00000539548 ANKRD18AQ8IVF6 992 aa10.83□□□□□ -0.68
CDH13-204ENST00000539548 JAKMIP2Q96AA8 810 aa10.83□□□□□ -0.68
CDH13-204ENST00000539548 NSUN4Q96CB9 384 aaKnown RBP10.83□□□□□ -0.68
CDH13-204ENST00000539548 EIF3CQ99613 913 aaKnown RBP10.83□□□□□ -0.68
CDH13-204ENST00000539548 CRNKL1Q9BZJ0 848 aaKnown RBP10.83□□□□□ -0.68
CDH13-204ENST00000539548 TTYH3Q9C0H2 523 aa10.83□□□□□ -0.68
CDH13-204ENST00000539548 RASSF4Q9H2L5 321 aa10.83□□□□□ -0.68
CDH13-204ENST00000539548 DCP1AQ9NPI6 582 aaPredicted RBP10.83□□□□□ -0.68
CDH13-204ENST00000539548 BSDC1Q9NW68 430 aaPredicted RBP10.83□□□□□ -0.68
CDH13-204ENST00000539548 LCMT1Q9UIC8 334 aa10.83□□□□□ -0.68
CDH13-204ENST00000539548 RRP15Q9Y3B9 282 aaKnown RBP10.83□□□□□ -0.68
CDH13-204ENST00000539548 FAM205AQ6ZU69 1335 aa10.83□□□□□ -0.68
CDH13-204ENST00000539548 ANO9A1A5B4 782 aa10.83□□□□□ -0.68
CDH13-204ENST00000539548 WTIPA6NIX2 430 aaPredicted RBP10.83□□□□□ -0.68
CDH13-204ENST00000539548 SYF2O95926 243 aaKnown RBP10.83□□□□□ -0.68
CDH13-204ENST00000539548 CDK17Q00537 523 aa10.83□□□□□ -0.68
CDH13-204ENST00000539548 FBXO33Q7Z6M2 555 aa10.83□□□□□ -0.68
CDH13-204ENST00000539548 ANKS1AQ92625 1134 aa10.83□□□□□ -0.68
CDH13-204ENST00000539548 TRIM47Q96LD4 638 aa10.83□□□□□ -0.68
CDH13-204ENST00000539548 DUSP9Q99956 384 aaKnown RBP10.83□□□□□ -0.68
CDH13-204ENST00000539548 CUEDC2Q9H467 287 aa10.83□□□□□ -0.68
CDH13-204ENST00000539548 EXOC1Q9NV70 894 aa10.83□□□□□ -0.68
CDH13-204ENST00000539548 ZNHIT6Q9NWK9 470 aaKnown RBP10.83□□□□□ -0.68
CDH13-204ENST00000539548 RASSF10A6NK89 507 aa10.82□□□□□ -0.68
CDH13-204ENST00000539548 LAD1O00515 517 aa10.82□□□□□ -0.68
CDH13-204ENST00000539548 PRPHP41219 470 aa10.82□□□□□ -0.68
CDH13-204ENST00000539548 UBA7P41226 1012 aa10.82□□□□□ -0.68
CDH13-204ENST00000539548 NT5C2P49902 561 aa10.82□□□□□ -0.68
CDH13-204ENST00000539548 ZBED6P86452 979 aa10.82□□□□□ -0.68
CDH13-204ENST00000539548 EVX2Q03828 476 aa10.82□□□□□ -0.68
CDH13-204ENST00000539548 SF3B3Q15393 1217 aaKnown RBP10.82□□□□□ -0.68
CDH13-204ENST00000539548 GALNT17Q6IS24 598 aa10.82□□□□□ -0.68
CDH13-204ENST00000539548 DAGLBQ8NCG7 672 aa10.82□□□□□ -0.68
CDH13-204ENST00000539548 COG1Q8WTW3 980 aa10.82□□□□□ -0.68
CDH13-204ENST00000539548 PURBQ96QR8 312 aaKnown RBP10.82□□□□□ -0.68
CDH13-204ENST00000539548 TUBGCP2Q9BSJ2 902 aa10.82□□□□□ -0.68
CDH13-204ENST00000539548 FAM204AQ9H8W3 233 aa10.82□□□□□ -0.68
CDH13-204ENST00000539548 MAGEF1Q9HAY2 307 aa10.82□□□□□ -0.68
CDH13-204ENST00000539548 ARPP21Q9UBL0 812 aaPredicted RBP10.82□□□□□ -0.68
CDH13-204ENST00000539548 HPCAL4Q9UM19 191 aa10.82□□□□□ -0.68
CDH13-204ENST00000539548 MYH1P12882 1939 aa10.82□□□□□ -0.68
CDH13-204ENST00000539548 KIAA1551Q9HCM1 1747 aa10.82□□□□□ -0.68
CDH13-204ENST00000539548 CCDC194A0A1B0GVG4 234 aa10.82□□□□□ -0.68
CDH13-204ENST00000539548 B4DLN1 442 aa10.82□□□□□ -0.68
CDH13-204ENST00000539548 PES1O00541 588 aaKnown RBP10.82□□□□□ -0.68
CDH13-204ENST00000539548 PRPF6O94906 941 aaKnown RBP10.82□□□□□ -0.68
CDH13-204ENST00000539548 ADAMTS2O95450 1211 aa10.82□□□□□ -0.68
CDH13-204ENST00000539548 CCNE1P24864 410 aa10.82□□□□□ -0.68
CDH13-204ENST00000539548 MECOMQ03112 1051 aa10.82□□□□□ -0.68
CDH13-204ENST00000539548 TBC1D8BQ0IIM8 1120 aa10.82□□□□□ -0.68
CDH13-204ENST00000539548 FIGNQ5HY92 759 aa10.82□□□□□ -0.68
CDH13-204ENST00000539548 LRRC31Q6UY01 552 aa10.82□□□□□ -0.68
CDH13-204ENST00000539548 DGKHQ86XP1 1220 aa10.82□□□□□ -0.68
CDH13-204ENST00000539548 GOLGA6L1Q8N7Z2 621 aa10.82□□□□□ -0.68
CDH13-204ENST00000539548 LACRTQ9GZZ8 138 aa10.82□□□□□ -0.68
CDH13-204ENST00000539548 TMEM60Q9H2L4 133 aa10.82□□□□□ -0.68
CDH13-204ENST00000539548 NHEJ1Q9H9Q4 299 aaPredicted RBP10.82□□□□□ -0.68
CDH13-204ENST00000539548 AGPAT5Q9NUQ2 364 aa10.82□□□□□ -0.68
CDH13-204ENST00000539548 PCDHA6Q9UN73 950 aa10.82□□□□□ -0.68
CDH13-204ENST00000539548 MINPP1Q9UNW1 487 aa10.82□□□□□ -0.68
CDH13-204ENST00000539548 PCDHA8Q9Y5H6 950 aa10.82□□□□□ -0.68
CDH13-204ENST00000539548 DOT1LQ8TEK3 1739 aa10.81□□□□□ -0.68
CDH13-204ENST00000539548 TAF1P21675 1872 aa10.81□□□□□ -0.68
CDH13-204ENST00000539548 ZC3H4Q9UPT8 1303 aaKnown RBP10.81□□□□□ -0.68
CDH13-204ENST00000539548 MYH14Q7Z406 1995 aaKnown RBP10.81□□□□□ -0.68
CDH13-204ENST00000539548 A0A1W2PQJ5 194 aa10.81□□□□□ -0.68
CDH13-204ENST00000539548 BICDL2A1A5D9 508 aa10.81□□□□□ -0.68
CDH13-204ENST00000539548 RCCD1A6NED2 376 aa10.81□□□□□ -0.68
CDH13-204ENST00000539548 TSPY2A6NKD2 308 aa10.81□□□□□ -0.68
CDH13-204ENST00000539548 PP2D1A8MPX8 630 aa10.81□□□□□ -0.68
CDH13-204ENST00000539548 SRGAP2O75044 1071 aa10.81□□□□□ -0.68
CDH13-204ENST00000539548 RNF40O75150 1001 aa10.81□□□□□ -0.68
CDH13-204ENST00000539548 PHACTR2O75167 634 aa10.81□□□□□ -0.68
CDH13-204ENST00000539548 IPO7O95373 1038 aaKnown RBP10.81□□□□□ -0.68
CDH13-204ENST00000539548 ATP6V1AP38606 617 aa10.81□□□□□ -0.68
CDH13-204ENST00000539548 PPP1R2P41236 205 aa10.81□□□□□ -0.68
CDH13-204ENST00000539548 GNAQP50148 359 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms