RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 DPP9Q86TI2 863 aa16.05■□□□□ 0.16
CACNB1-206ENST00000539338 LRRC47Q8N1G4 583 aaKnown RBP16.05■□□□□ 0.16
CACNB1-206ENST00000539338 CSRNP2Q9H175 543 aa16.05■□□□□ 0.16
CACNB1-206ENST00000539338 EXOC7Q9UPT5 735 aa16.05■□□□□ 0.16
CACNB1-206ENST00000539338 FAM47CQ5HY64 1035 aa16.05■□□□□ 0.16
CACNB1-206ENST00000539338 BCORL1Q5H9F3 1711 aa16.05■□□□□ 0.16
CACNB1-206ENST00000539338 GTPBP6O43824 516 aaPredicted RBP16.05■□□□□ 0.16
CACNB1-206ENST00000539338 RPN1P04843 607 aaKnown RBP16.05■□□□□ 0.16
CACNB1-206ENST00000539338 NSMFQ6X4W1 530 aa16.05■□□□□ 0.16
CACNB1-206ENST00000539338 MYOCDQ8IZQ8 938 aa16.05■□□□□ 0.16
CACNB1-206ENST00000539338 NT5C3AQ9H0P0 336 aa16.05■□□□□ 0.16
CACNB1-206ENST00000539338 DDX41Q9UJV9 622 aaKnown RBP16.05■□□□□ 0.16
CACNB1-206ENST00000539338 WHAMMP3Q1A5X7 153 aa16.05■□□□□ 0.16
CACNB1-206ENST00000539338 SLC39A2Q9NP94 309 aa16.05■□□□□ 0.16
CACNB1-206ENST00000539338 ASAP1Q9ULH1 1129 aa16.05■□□□□ 0.16
CACNB1-206ENST00000539338 KCNH4Q9UQ05 1017 aa16.05■□□□□ 0.16
CACNB1-206ENST00000539338 MYO3BQ8WXR4 1341 aa16.05■□□□□ 0.16
CACNB1-206ENST00000539338 PRR36Q9H6K5 1346 aa16.05■□□□□ 0.16
CACNB1-206ENST00000539338 BUB1O43683 1085 aa16.04■□□□□ 0.16
CACNB1-206ENST00000539338 OR52Z1P0C646 297 aa16.04■□□□□ 0.16
CACNB1-206ENST00000539338 GUCY2FP51841 1108 aa16.04■□□□□ 0.16
CACNB1-206ENST00000539338 STRN3Q13033 797 aa16.04■□□□□ 0.16
CACNB1-206ENST00000539338 LIN9Q5TKA1 542 aa16.04■□□□□ 0.16
CACNB1-206ENST00000539338 PPM1EQ8WY54 764 aa16.04■□□□□ 0.16
CACNB1-206ENST00000539338 TSKSQ9UJT2 592 aa16.04■□□□□ 0.16
CACNB1-206ENST00000539338 FAM169AQ9Y6X4 670 aa16.04■□□□□ 0.16
CACNB1-206ENST00000539338 CAPN15O75808 1086 aa16.04■□□□□ 0.16
CACNB1-206ENST00000539338 INPP5BP32019 993 aa16.04■□□□□ 0.16
CACNB1-206ENST00000539338 DNM2P50570 870 aa16.04■□□□□ 0.16
CACNB1-206ENST00000539338 ATP5DP30049 168 aa16.04■□□□□ 0.16
CACNB1-206ENST00000539338 IRX5P78411 483 aaPredicted RBP16.04■□□□□ 0.16
CACNB1-206ENST00000539338 U2AF1L4Q8WU68 220 aaKnown RBP16.04■□□□□ 0.16
CACNB1-206ENST00000539338 HINFPQ9BQA5 517 aa16.04■□□□□ 0.16
CACNB1-206ENST00000539338 UNC13BO14795 1591 aa16.04■□□□□ 0.16
CACNB1-206ENST00000539338 BRD3Q15059 726 aa16.04■□□□□ 0.16
CACNB1-206ENST00000539338 RUFY4Q6ZNE9 571 aa16.04■□□□□ 0.16
CACNB1-206ENST00000539338 AP5M1Q9H0R1 490 aa16.04■□□□□ 0.16
CACNB1-206ENST00000539338 PLA2R1Q13018 1463 aa16.04■□□□□ 0.16
CACNB1-206ENST00000539338 USP6P35125 1406 aa16.04■□□□□ 0.16
CACNB1-206ENST00000539338 CIAO1O76071 339 aa16.04■□□□□ 0.16
CACNB1-206ENST00000539338 ABCB4P21439 1286 aa16.04■□□□□ 0.16
CACNB1-206ENST00000539338 TRPC3Q13507 836 aa16.04■□□□□ 0.16
CACNB1-206ENST00000539338 NEK8Q86SG6 692 aa16.04■□□□□ 0.16
CACNB1-206ENST00000539338 CCDC105Q8IYK2 499 aa16.04■□□□□ 0.16
CACNB1-206ENST00000539338 PPP1R13BQ96KQ4 1090 aa16.04■□□□□ 0.16
CACNB1-206ENST00000539338 ROBO2Q9HCK4 1378 aa16.03■□□□□ 0.16
CACNB1-206ENST00000539338 TRIM58Q8NG06 486 aa16.03■□□□□ 0.16
CACNB1-206ENST00000539338 CACTINQ8WUQ7 758 aaKnown RBP16.03■□□□□ 0.16
CACNB1-206ENST00000539338 ATP8A2Q9NTI2 1148 aa16.03■□□□□ 0.16
CACNB1-206ENST00000539338 STK24Q9Y6E0 443 aa16.03■□□□□ 0.16
CACNB1-206ENST00000539338 EFCAB8A8MWE9 144 aa16.03■□□□□ 0.16
CACNB1-206ENST00000539338 BCRP11274 1271 aa16.03■□□□□ 0.16
CACNB1-206ENST00000539338 CYP2J2P51589 502 aa16.03■□□□□ 0.16
CACNB1-206ENST00000539338 PPFIA1Q13136 1202 aa16.03■□□□□ 0.16
CACNB1-206ENST00000539338 SYCE1Q8N0S2 351 aa16.03■□□□□ 0.16
CACNB1-206ENST00000539338 KIFC2Q96AC6 838 aa16.03■□□□□ 0.16
CACNB1-206ENST00000539338 TRIM7Q9C029 511 aa16.03■□□□□ 0.16
CACNB1-206ENST00000539338 NUCKS1Q9H1E3 243 aaKnown RBP16.03■□□□□ 0.16
CACNB1-206ENST00000539338 GPR108Q9NPR9 543 aa16.03■□□□□ 0.16
CACNB1-206ENST00000539338 MAP3K4Q9Y6R4 1608 aa16.03■□□□□ 0.16
CACNB1-206ENST00000539338 PRR16Q569H4 304 aa16.03■□□□□ 0.16
CACNB1-206ENST00000539338 SMYD4Q8IYR2 804 aaPredicted RBP16.03■□□□□ 0.16
CACNB1-206ENST00000539338 PI4K2BQ8TCG2 481 aa16.03■□□□□ 0.16
CACNB1-206ENST00000539338 PSTPIP2Q9H939 334 aa16.03■□□□□ 0.16
CACNB1-206ENST00000539338 PCDHA12Q9UN75 941 aa16.03■□□□□ 0.16
CACNB1-206ENST00000539338 CPS1P31327 1500 aa16.03■□□□□ 0.16
CACNB1-206ENST00000539338 CASP14P31944 242 aa16.03■□□□□ 0.16
CACNB1-206ENST00000539338 SLC15A2Q16348 729 aa16.03■□□□□ 0.16
CACNB1-206ENST00000539338 PPP1R21Q6ZMI0 780 aa16.03■□□□□ 0.16
CACNB1-206ENST00000539338 GRAMD1CQ8IYS0 662 aa16.03■□□□□ 0.16
CACNB1-206ENST00000539338 XDHP47989 1333 aa16.02■□□□□ 0.16
CACNB1-206ENST00000539338 C21orf2O43822 256 aa16.02■□□□□ 0.16
CACNB1-206ENST00000539338 DDAH1O94760 285 aa16.02■□□□□ 0.16
CACNB1-206ENST00000539338 SASH1O94885 1247 aa16.02■□□□□ 0.16
CACNB1-206ENST00000539338 XRCC5P13010 732 aaKnown RBP16.02■□□□□ 0.16
CACNB1-206ENST00000539338 POLR3EQ9NVU0 708 aa16.02■□□□□ 0.16
CACNB1-206ENST00000539338 CAMSAP1Q5T5Y3 1602 aa16.02■□□□□ 0.16
CACNB1-206ENST00000539338 PABPN1LA6NDY0 278 aaKnown RBP16.02■□□□□ 0.16
CACNB1-206ENST00000539338 SKIV2LQ15477 1246 aaKnown RBP16.02■□□□□ 0.16
CACNB1-206ENST00000539338 OSBP2Q969R2 916 aa16.02■□□□□ 0.16
CACNB1-206ENST00000539338 PUS7LQ9H0K6 701 aaKnown RBP16.02■□□□□ 0.16
CACNB1-206ENST00000539338 SWAP70Q9UH65 585 aa16.02■□□□□ 0.16
CACNB1-206ENST00000539338 LACTBP83111 547 aaPredicted RBP16.02■□□□□ 0.15
CACNB1-206ENST00000539338 SREBF2Q12772 1141 aa16.02■□□□□ 0.15
CACNB1-206ENST00000539338 APOBEC3FQ8IUX4 373 aaKnown RBP16.02■□□□□ 0.15
CACNB1-206ENST00000539338 KCNK3O14649 394 aa16.02■□□□□ 0.15
CACNB1-206ENST00000539338 PTPN12Q05209 780 aaKnown RBP16.02■□□□□ 0.15
CACNB1-206ENST00000539338 KRT71Q3SY84 523 aa16.02■□□□□ 0.15
CACNB1-206ENST00000539338 GAS7O60861 476 aa16.01■□□□□ 0.15
CACNB1-206ENST00000539338 USP14P54578 494 aa16.01■□□□□ 0.15
CACNB1-206ENST00000539338 KIF23Q02241 960 aaPredicted RBP16.01■□□□□ 0.15
CACNB1-206ENST00000539338 LONRF2Q1L5Z9 754 aa16.01■□□□□ 0.15
CACNB1-206ENST00000539338 RASGRP4Q8TDF6 673 aa16.01■□□□□ 0.15
CACNB1-206ENST00000539338 LEMD3Q9Y2U8 911 aa16.01■□□□□ 0.15
CACNB1-206ENST00000539338 KDM3AQ9Y4C1 1321 aa16.01■□□□□ 0.15
CACNB1-206ENST00000539338 PPP6R2O75170 966 aa16.01■□□□□ 0.15
CACNB1-206ENST00000539338 GNA14O95837 355 aa16.01■□□□□ 0.15
CACNB1-206ENST00000539338 ALDH3A1P30838 453 aa16.01■□□□□ 0.15
CACNB1-206ENST00000539338 COPB1P53618 953 aaKnown RBP16.01■□□□□ 0.15
CACNB1-206ENST00000539338 GBP6Q6ZN66 633 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms