RNA–Protein interactions for RNA: ENST00000539177.1

CCDC144NL-202, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 443 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-202ENST00000539177 IL23AQ9NPF7 189 aa17.57■□□□□ 0.4
CCDC144NL-202ENST00000539177 CTDP1Q9Y5B0 961 aaPredicted RBP17.57■□□□□ 0.4
CCDC144NL-202ENST00000539177 NCOR1O75376 2440 aa17.57■□□□□ 0.4
CCDC144NL-202ENST00000539177 CHD9Q3L8U1 2897 aa17.56■□□□□ 0.4
CCDC144NL-202ENST00000539177 NDUFB10O96000 172 aa17.56■□□□□ 0.4
CCDC144NL-202ENST00000539177 PLA2G5P39877 138 aa17.56■□□□□ 0.4
CCDC144NL-202ENST00000539177 RABGGTBP53611 331 aa17.56■□□□□ 0.4
CCDC144NL-202ENST00000539177 HSP90AB4PQ58FF6 505 aa17.56■□□□□ 0.4
CCDC144NL-202ENST00000539177 ARMCX2Q7L311 632 aa17.56■□□□□ 0.4
CCDC144NL-202ENST00000539177 OTOP2Q7RTS6 562 aa17.56■□□□□ 0.4
CCDC144NL-202ENST00000539177 ANKRD35Q8N283 1001 aa17.56■□□□□ 0.4
CCDC144NL-202ENST00000539177 HERVK_113Q902F9 699 aa17.56■□□□□ 0.4
CCDC144NL-202ENST00000539177 KIFC2Q96AC6 838 aa17.56■□□□□ 0.4
CCDC144NL-202ENST00000539177 ABHD16BQ9H3Z7 469 aa17.56■□□□□ 0.4
CCDC144NL-202ENST00000539177 LCTP09848 1927 aa17.55■□□□□ 0.4
CCDC144NL-202ENST00000539177 ZBED9Q6R2W3 1325 aa17.55■□□□□ 0.4
CCDC144NL-202ENST00000539177 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.55■□□□□ 0.4
CCDC144NL-202ENST00000539177 F5H6K3 240 aa17.55■□□□□ 0.4
CCDC144NL-202ENST00000539177 CD4P01730 458 aa17.55■□□□□ 0.4
CCDC144NL-202ENST00000539177 FGBP02675 491 aa17.55■□□□□ 0.4
CCDC144NL-202ENST00000539177 CCL23P55773 120 aa17.55■□□□□ 0.4
CCDC144NL-202ENST00000539177 KLRC3Q07444 240 aa17.55■□□□□ 0.4
CCDC144NL-202ENST00000539177 NOL8Q76FK4 1167 aaKnown RBP17.55■□□□□ 0.4
CCDC144NL-202ENST00000539177 ZNF467Q7Z7K2 595 aaPredicted RBP17.55■□□□□ 0.4
CCDC144NL-202ENST00000539177 FAM122AQ96E09 287 aa17.55■□□□□ 0.4
CCDC144NL-202ENST00000539177 KIF1BPQ96EK5 621 aa17.55■□□□□ 0.4
CCDC144NL-202ENST00000539177 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.55■□□□□ 0.4
CCDC144NL-202ENST00000539177 MTIF3Q9H2K0 278 aaKnown RBP17.55■□□□□ 0.4
CCDC144NL-202ENST00000539177 HIPK3Q9H422 1215 aa17.55■□□□□ 0.4
CCDC144NL-202ENST00000539177 CTAGE5O15320 804 aa17.54■□□□□ 0.4
CCDC144NL-202ENST00000539177 ZBED4O75132 1171 aa17.54■□□□□ 0.4
CCDC144NL-202ENST00000539177 MYOGP15173 224 aa17.54■□□□□ 0.4
CCDC144NL-202ENST00000539177 PTGS1P23219 599 aa17.54■□□□□ 0.4
CCDC144NL-202ENST00000539177 DIEXFQ68CQ4 756 aaKnown RBP17.54■□□□□ 0.4
CCDC144NL-202ENST00000539177 CXCL17Q6UXB2 119 aa17.54■□□□□ 0.4
CCDC144NL-202ENST00000539177 CCDC144CPQ8IYA2 1237 aa17.54■□□□□ 0.4
CCDC144NL-202ENST00000539177 PRPF38AQ8NAV1 312 aaKnown RBP17.54■□□□□ 0.4
CCDC144NL-202ENST00000539177 PANK1Q8TE04 598 aa17.54■□□□□ 0.4
CCDC144NL-202ENST00000539177 HOMER2Q9NSB8 354 aa17.54■□□□□ 0.4
CCDC144NL-202ENST00000539177 REV3LO60673 3130 aa17.54■□□□□ 0.4
CCDC144NL-202ENST00000539177 ASTN1O14525 1302 aa17.53■□□□□ 0.4
CCDC144NL-202ENST00000539177 RASA1P20936 1047 aa17.53■□□□□ 0.4
CCDC144NL-202ENST00000539177 CNTN2Q02246 1040 aa17.53■□□□□ 0.4
CCDC144NL-202ENST00000539177 TFF2Q03403 129 aa17.53■□□□□ 0.4
CCDC144NL-202ENST00000539177 PPP2R2DQ66LE6 453 aa17.53■□□□□ 0.4
CCDC144NL-202ENST00000539177 KATNBL1Q9H079 304 aa17.53■□□□□ 0.4
CCDC144NL-202ENST00000539177 PUS7LQ9H0K6 701 aaKnown RBP17.53■□□□□ 0.4
CCDC144NL-202ENST00000539177 ARPP21Q9UBL0 812 aaPredicted RBP17.53■□□□□ 0.4
CCDC144NL-202ENST00000539177 ZBBXA8MT70 800 aa17.52■□□□□ 0.4
CCDC144NL-202ENST00000539177 SKIV2LQ15477 1246 aaKnown RBP17.52■□□□□ 0.4
CCDC144NL-202ENST00000539177 TSPYL2Q9H2G4 693 aaPredicted RBP17.52■□□□□ 0.4
CCDC144NL-202ENST00000539177 MKNK2Q9HBH9 465 aa17.52■□□□□ 0.4
CCDC144NL-202ENST00000539177 SLC38A10Q9HBR0 1119 aa17.52■□□□□ 0.4
CCDC144NL-202ENST00000539177 NYAP2Q9P242 653 aa17.52■□□□□ 0.4
CCDC144NL-202ENST00000539177 CLIP2Q9UDT6 1046 aa17.52■□□□□ 0.4
CCDC144NL-202ENST00000539177 ISY1Q9ULR0 285 aaKnown RBP17.52■□□□□ 0.4
CCDC144NL-202ENST00000539177 DDX49Q9Y6V7 483 aaKnown RBP17.52■□□□□ 0.4
CCDC144NL-202ENST00000539177 CHD7Q9P2D1 2997 aa17.52■□□□□ 0.39
CCDC144NL-202ENST00000539177 PRRC2BQ5JSZ5 2229 aaKnown RBP17.51■□□□□ 0.39
CCDC144NL-202ENST00000539177 MINDY4BA8MYZ0 360 aa17.51■□□□□ 0.39
CCDC144NL-202ENST00000539177 ATP2A1O14983 1001 aa17.51■□□□□ 0.39
CCDC144NL-202ENST00000539177 KCNQ1P51787 676 aa17.51■□□□□ 0.39
CCDC144NL-202ENST00000539177 TNFAIP2Q03169 654 aa17.51■□□□□ 0.39
CCDC144NL-202ENST00000539177 ITGA7Q13683 1181 aa17.51■□□□□ 0.39
CCDC144NL-202ENST00000539177 UBE3CQ15386 1083 aa17.51■□□□□ 0.39
CCDC144NL-202ENST00000539177 TLK2Q86UE8 772 aa17.51■□□□□ 0.39
CCDC144NL-202ENST00000539177 LRRC47Q8N1G4 583 aaKnown RBP17.51■□□□□ 0.39
CCDC144NL-202ENST00000539177 HAUS7Q99871 368 aa17.51■□□□□ 0.39
CCDC144NL-202ENST00000539177 TRPV6Q9H1D0 765 aa17.51■□□□□ 0.39
CCDC144NL-202ENST00000539177 WNT8AQ9H1J5 351 aa17.51■□□□□ 0.39
CCDC144NL-202ENST00000539177 FBXO40Q9UH90 709 aa17.51■□□□□ 0.39
CCDC144NL-202ENST00000539177 COL4A4P53420 1690 aaPredicted RBP17.51■□□□□ 0.39
CCDC144NL-202ENST00000539177 TANC1Q9C0D5 1861 aa17.5■□□□□ 0.39
CCDC144NL-202ENST00000539177 B4GALT4O60513 344 aa17.5■□□□□ 0.39
CCDC144NL-202ENST00000539177 PSMC6P62333 389 aa17.5■□□□□ 0.39
CCDC144NL-202ENST00000539177 CHST13Q8NET6 341 aa17.5■□□□□ 0.39
CCDC144NL-202ENST00000539177 CHMP4CQ96CF2 233 aa17.5■□□□□ 0.39
CCDC144NL-202ENST00000539177 SCLYQ96I15 445 aa17.5■□□□□ 0.39
CCDC144NL-202ENST00000539177 NOC4LQ9BVI4 516 aaKnown RBP17.5■□□□□ 0.39
CCDC144NL-202ENST00000539177 SLC4A7Q9Y6M7 1214 aa17.5■□□□□ 0.39
CCDC144NL-202ENST00000539177 GRIN2DO15399 1336 aa17.49■□□□□ 0.39
CCDC144NL-202ENST00000539177 PTPRSQ13332 1948 aa17.49■□□□□ 0.39
CCDC144NL-202ENST00000539177 CCER2I3L3R5 266 aa17.49■□□□□ 0.39
CCDC144NL-202ENST00000539177 RFXAPO00287 272 aa17.49■□□□□ 0.39
CCDC144NL-202ENST00000539177 PRDM1O75626 825 aa17.49■□□□□ 0.39
CCDC144NL-202ENST00000539177 BMP1P13497 986 aa17.49■□□□□ 0.39
CCDC144NL-202ENST00000539177 ATP5JP18859 108 aa17.49■□□□□ 0.39
CCDC144NL-202ENST00000539177 FSCN1Q16658 493 aaKnown RBP17.49■□□□□ 0.39
CCDC144NL-202ENST00000539177 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.49■□□□□ 0.39
CCDC144NL-202ENST00000539177 SLC43A3Q8NBI5 491 aa17.49■□□□□ 0.39
CCDC144NL-202ENST00000539177 CERS4Q9HA82 394 aa17.49■□□□□ 0.39
CCDC144NL-202ENST00000539177 FEM1BQ9UK73 627 aa17.49■□□□□ 0.39
CCDC144NL-202ENST00000539177 BDP1A6H8Y1 2624 aa17.49■□□□□ 0.39
CCDC144NL-202ENST00000539177 DYNC1LI2O43237 492 aaPredicted RBP17.48■□□□□ 0.39
CCDC144NL-202ENST00000539177 NKX3-2P78367 333 aa17.48■□□□□ 0.39
CCDC144NL-202ENST00000539177 ZSCAN25Q6NSZ9 544 aa17.48■□□□□ 0.39
CCDC144NL-202ENST00000539177 EEPD1Q7L9B9 569 aa17.48■□□□□ 0.39
CCDC144NL-202ENST00000539177 FAM133AQ8N9E0 248 aa17.48■□□□□ 0.39
CCDC144NL-202ENST00000539177 CEP95Q96GE4 821 aa17.48■□□□□ 0.39
CCDC144NL-202ENST00000539177 AP5M1Q9H0R1 490 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms