RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 GALNT17Q6IS24 598 aa11.8□□□□□ -0.52
CLPB-210ENST00000539148 CYP4F22Q6NT55 531 aa11.8□□□□□ -0.52
CLPB-210ENST00000539148 PPP1R18Q6NYC8 613 aa11.8□□□□□ -0.52
CLPB-210ENST00000539148 SAMD1Q6SPF0 538 aaPredicted RBP11.8□□□□□ -0.52
CLPB-210ENST00000539148 FBXO11Q86XK2 927 aa11.8□□□□□ -0.52
CLPB-210ENST00000539148 RAB11FIP4Q86YS3 637 aa11.8□□□□□ -0.52
CLPB-210ENST00000539148 IFNL1Q8IU54 200 aa11.8□□□□□ -0.52
CLPB-210ENST00000539148 STAG2Q8N3U4 1231 aa11.8□□□□□ -0.52
CLPB-210ENST00000539148 CCDC82Q8N4S0 544 aa11.8□□□□□ -0.52
CLPB-210ENST00000539148 SRBD1Q8N5C6 995 aaKnown RBP11.8□□□□□ -0.52
CLPB-210ENST00000539148 BICD2Q8TD16 824 aa11.8□□□□□ -0.52
CLPB-210ENST00000539148 NUP88Q99567 741 aaPredicted RBP11.8□□□□□ -0.52
CLPB-210ENST00000539148 UBA5Q9GZZ9 404 aa11.8□□□□□ -0.52
CLPB-210ENST00000539148 ASCC2Q9H1I8 757 aaPredicted RBP11.8□□□□□ -0.52
CLPB-210ENST00000539148 FBXO40Q9UH90 709 aa11.8□□□□□ -0.52
CLPB-210ENST00000539148 RABGAP1Q9Y3P9 1069 aa11.8□□□□□ -0.52
CLPB-210ENST00000539148 V9GY48 417 aaPredicted RBP11.8□□□□□ -0.52
CLPB-210ENST00000539148 FAM155AB1AL88 458 aaPredicted RBP11.79□□□□□ -0.52
CLPB-210ENST00000539148 BTBD19C9JJ37 291 aa11.79□□□□□ -0.52
CLPB-210ENST00000539148 VWA5AO00534 786 aa11.79□□□□□ -0.52
CLPB-210ENST00000539148 ATP2A1O14983 1001 aa11.79□□□□□ -0.52
CLPB-210ENST00000539148 PLEKHA8P1O95397 391 aa11.79□□□□□ -0.52
CLPB-210ENST00000539148 SLC25A27O95847 323 aa11.79□□□□□ -0.52
CLPB-210ENST00000539148 ICAM1P05362 532 aa11.79□□□□□ -0.52
CLPB-210ENST00000539148 GNA11P29992 359 aa11.79□□□□□ -0.52
CLPB-210ENST00000539148 SLC16A2P36021 539 aa11.79□□□□□ -0.52
CLPB-210ENST00000539148 HERVK_113P62684 666 aa11.79□□□□□ -0.52
CLPB-210ENST00000539148 KIF23Q02241 960 aaPredicted RBP11.79□□□□□ -0.52
CLPB-210ENST00000539148 ARHGEF6Q15052 776 aa11.79□□□□□ -0.52
CLPB-210ENST00000539148 TAF1CQ15572 869 aaPredicted RBP11.79□□□□□ -0.52
CLPB-210ENST00000539148 NTRK3Q16288 839 aa11.79□□□□□ -0.52
CLPB-210ENST00000539148 CDC37Q16543 378 aaPredicted RBP11.79□□□□□ -0.52
CLPB-210ENST00000539148 PFKFB3Q16875 520 aaPredicted RBP11.79□□□□□ -0.52
CLPB-210ENST00000539148 COL13A1Q5TAT6 717 aaPredicted RBP11.79□□□□□ -0.52
CLPB-210ENST00000539148 HOMER1Q86YM7 354 aa11.79□□□□□ -0.52
CLPB-210ENST00000539148 NSUN7Q8NE18 718 aaKnown RBP11.79□□□□□ -0.52
CLPB-210ENST00000539148 SMARCC2Q8TAQ2 1214 aa11.79□□□□□ -0.52
CLPB-210ENST00000539148 BRI3BPQ8WY22 251 aa11.79□□□□□ -0.52
CLPB-210ENST00000539148 TEX13BQ9BXU2 312 aa11.79□□□□□ -0.52
CLPB-210ENST00000539148 RANBP17Q9H2T7 1088 aaKnown RBP11.79□□□□□ -0.52
CLPB-210ENST00000539148 MAP3K20Q9NYL2 800 aaKnown RBP11.79□□□□□ -0.52
CLPB-210ENST00000539148 ADAMTS5Q9UNA0 930 aa11.79□□□□□ -0.52
CLPB-210ENST00000539148 MRPL11Q9Y3B7 192 aaKnown RBP11.79□□□□□ -0.52
CLPB-210ENST00000539148 RLFQ13129 1914 aa11.79□□□□□ -0.52
CLPB-210ENST00000539148 ABCB11O95342 1321 aa11.79□□□□□ -0.52
CLPB-210ENST00000539148 CNTNAP5Q8WYK1 1306 aa11.79□□□□□ -0.52
CLPB-210ENST00000539148 RBBP6Q7Z6E9 1792 aaKnown RBP11.78□□□□□ -0.52
CLPB-210ENST00000539148 H3BQV1 296 aa11.78□□□□□ -0.52
CLPB-210ENST00000539148 CA12O43570 354 aa11.78□□□□□ -0.52
CLPB-210ENST00000539148 LARGE1O95461 756 aa11.78□□□□□ -0.52
CLPB-210ENST00000539148 MCM4P33991 863 aa11.78□□□□□ -0.52
CLPB-210ENST00000539148 MRPL12P52815 198 aaKnown RBP11.78□□□□□ -0.52
CLPB-210ENST00000539148 MAP2K1Q02750 393 aaPredicted RBP11.78□□□□□ -0.52
CLPB-210ENST00000539148 TREML2Q5T2D2 321 aa11.78□□□□□ -0.52
CLPB-210ENST00000539148 TTBK2Q6IQ55 1244 aa11.78□□□□□ -0.52
CLPB-210ENST00000539148 GPAT2Q6NUI2 795 aa11.78□□□□□ -0.52
CLPB-210ENST00000539148 MCF2L2Q86YR7 1114 aa11.78□□□□□ -0.52
CLPB-210ENST00000539148 CUL5Q93034 780 aa11.78□□□□□ -0.52
CLPB-210ENST00000539148 PHKBQ93100 1093 aa11.78□□□□□ -0.52
CLPB-210ENST00000539148 MTMR8Q96EF0 704 aa11.78□□□□□ -0.52
CLPB-210ENST00000539148 C8orf76Q96K31 380 aa11.78□□□□□ -0.52
CLPB-210ENST00000539148 PIGSQ96S52 555 aa11.78□□□□□ -0.52
CLPB-210ENST00000539148 ALG1Q9BT22 464 aa11.78□□□□□ -0.52
CLPB-210ENST00000539148 JMJD4Q9H9V9 463 aa11.78□□□□□ -0.52
CLPB-210ENST00000539148 SLC38A10Q9HBR0 1119 aa11.78□□□□□ -0.52
CLPB-210ENST00000539148 C6orf50Q9HD87 102 aa11.78□□□□□ -0.52
CLPB-210ENST00000539148 FAM217BQ9NTX9 383 aaPredicted RBP11.78□□□□□ -0.52
CLPB-210ENST00000539148 PCDHA1Q9Y5I3 950 aa11.78□□□□□ -0.52
CLPB-210ENST00000539148 A0A0G2JMZ2 1700 aa11.77□□□□□ -0.52
CLPB-210ENST00000539148 SPDYE16A6NNV3 312 aaPredicted RBP11.77□□□□□ -0.53
CLPB-210ENST00000539148 GJB2P29033 226 aa11.77□□□□□ -0.53
CLPB-210ENST00000539148 STAT3P40763 770 aa11.77□□□□□ -0.53
CLPB-210ENST00000539148 NAPAP54920 295 aa11.77□□□□□ -0.53
CLPB-210ENST00000539148 FUT2Q10981 343 aa11.77□□□□□ -0.53
CLPB-210ENST00000539148 MOGSQ13724 837 aa11.77□□□□□ -0.53
CLPB-210ENST00000539148 GNL2Q13823 731 aaKnown RBP11.77□□□□□ -0.53
CLPB-210ENST00000539148 PLS1Q14651 629 aa11.77□□□□□ -0.53
CLPB-210ENST00000539148 GSE1Q14687 1217 aa11.77□□□□□ -0.53
CLPB-210ENST00000539148 QRICH1Q2TAL8 776 aa11.77□□□□□ -0.53
CLPB-210ENST00000539148 KIAA1755Q5JYT7 1200 aa11.77□□□□□ -0.53
CLPB-210ENST00000539148 LARP1BQ659C4 914 aaKnown RBP11.77□□□□□ -0.53
CLPB-210ENST00000539148 HEATR3Q7Z4Q2 680 aa11.77□□□□□ -0.53
CLPB-210ENST00000539148 NBPF11Q86T75 865 aa11.77□□□□□ -0.53
CLPB-210ENST00000539148 CHST13Q8NET6 341 aa11.77□□□□□ -0.53
CLPB-210ENST00000539148 GPRC5AQ8NFJ5 357 aa11.77□□□□□ -0.53
CLPB-210ENST00000539148 DDX11Q96FC9 970 aa11.77□□□□□ -0.53
CLPB-210ENST00000539148 MPHOSPH6Q99547 160 aaKnown RBP11.77□□□□□ -0.53
CLPB-210ENST00000539148 MROH8Q9H579 483 aa11.77□□□□□ -0.53
CLPB-210ENST00000539148 EHMT1Q9H9B1 1298 aa11.77□□□□□ -0.53
CLPB-210ENST00000539148 BARHL2Q9NY43 387 aa11.77□□□□□ -0.53
CLPB-210ENST00000539148 CCPG1Q9ULG6 757 aa11.77□□□□□ -0.53
CLPB-210ENST00000539148 THSD7BQ9C0I4 1608 aa11.76□□□□□ -0.53
CLPB-210ENST00000539148 ESYT2A0FGR8 921 aa11.76□□□□□ -0.53
CLPB-210ENST00000539148 B4DLN1 442 aa11.76□□□□□ -0.53
CLPB-210ENST00000539148 CYTH3O43739 400 aa11.76□□□□□ -0.53
CLPB-210ENST00000539148 NLRP5P59047 1200 aa11.76□□□□□ -0.53
CLPB-210ENST00000539148 KIF22Q14807 665 aa11.76□□□□□ -0.53
CLPB-210ENST00000539148 FAM110CQ1W6H9 321 aa11.76□□□□□ -0.53
CLPB-210ENST00000539148 CPXCR1Q8N123 301 aa11.76□□□□□ -0.53
CLPB-210ENST00000539148 CMTR1Q8N1G2 835 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms