RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 CYP2R1Q6VVX0 501 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 PPP1R3FQ6ZSY5 799 aaPredicted RBP1.49□□□□□ -2.17
HIF1A-204ENST00000539097 KIAA1211Q6ZU35 1233 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 FAM214BQ7L5A3 538 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 SAPCD2Q86UD0 394 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 NME9Q86XW9 330 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 CCDC103Q8IW40 242 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 ZZZ3Q8IYH5 903 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 LILRA2Q8N149 483 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 DAGLBQ8NCG7 672 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 GALNT6Q8NCL4 622 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 ADCY4Q8NFM4 1077 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 BAHD1Q8TBE0 780 aaPredicted RBP1.49□□□□□ -2.17
HIF1A-204ENST00000539097 DDX1Q92499 740 aaKnown RBP1.49□□□□□ -2.17
HIF1A-204ENST00000539097 C1orf159Q96HA4 380 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 CCDC74BQ96LY2 380 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 FGD4Q96M96 766 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 SLC6A18Q96N87 628 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 FERD3LQ96RJ6 166 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 FOXQ1Q9C009 403 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 SPC25Q9HBM1 224 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 CYP26B1Q9NR63 512 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 CNOT11Q9UKZ1 510 aaKnown RBP1.49□□□□□ -2.17
HIF1A-204ENST00000539097 PRR12Q9ULL5 1215 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 ST14Q9Y5Y6 855 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 TRAV20A0A0B4J274 112 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 A0A1W2PQU0 124 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 DDAH1O94760 285 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 ASMTLO95671 621 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 THBS2P35442 1172 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 MASP1P48740 699 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 EFR3AQ14156 821 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 POU4F3Q15319 338 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 NTRK3Q16288 839 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 PRRT3Q5FWE3 981 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 ZBTB37Q5TC79 503 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 ELMSAN1Q6PJG2 1045 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 ZC3HAV1Q7Z2W4 902 aaKnown RBP1.48□□□□□ -2.17
HIF1A-204ENST00000539097 DZIP1LQ8IYY4 767 aaKnown RBP1.48□□□□□ -2.17
HIF1A-204ENST00000539097 ZBTB38Q8NAP3 1195 aaPredicted RBP1.48□□□□□ -2.17
HIF1A-204ENST00000539097 PHOSPHO1Q8TCT1 267 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 COG1Q8WTW3 980 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 CRBNQ96SW2 442 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 USP26Q9BXU7 913 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 TRIT1Q9H3H1 467 aaKnown RBP1.48□□□□□ -2.17
HIF1A-204ENST00000539097 GABBR1Q9UBS5 961 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 MKL2Q9ULH7 1088 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 EMC9Q9Y3B6 208 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 TRAF6Q9Y4K3 522 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 COL4A3BPQ9Y5P4 624 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 KDM2BQ8NHM5 1336 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 GMPRP36959 345 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 CTSKP43235 329 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 PREPP48147 710 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 FXR1P51114 621 aaKnown RBP eCLIP1.48□□□□□ -2.17
HIF1A-204ENST00000539097 PTPROQ16827 1216 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 ANO4Q32M45 955 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 EMC4Q5J8M3 183 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 TMEM63BQ5T3F8 832 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 PRAMEF13Q5VWM6 474 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 NLRC3Q7RTR2 1065 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 WFDC8Q8IUA0 241 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 CCAR1Q8IX12 1150 aaKnown RBP1.48□□□□□ -2.17
HIF1A-204ENST00000539097 FAM178BQ8IXR5 827 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 PRPF38AQ8NAV1 312 aaKnown RBP1.48□□□□□ -2.17
HIF1A-204ENST00000539097 SLC7A14Q8TBB6 771 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 DCAF4Q8WV16 495 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 UBL7Q96S82 380 aaPredicted RBP1.48□□□□□ -2.17
HIF1A-204ENST00000539097 TARS2Q9BW92 718 aaKnown RBP1.48□□□□□ -2.17
HIF1A-204ENST00000539097 CRTAC1Q9NQ79 661 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 TMEFF2Q9UIK5 374 aaPredicted RBP1.48□□□□□ -2.17
HIF1A-204ENST00000539097 PHLDB1Q86UU1 1377 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 CCDC194A0A1B0GVG4 234 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 AQP7O14520 342 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 ABLIM1O14639 778 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 MARCH6O60337 910 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 KATNA1O75449 491 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 ZBTB7AO95365 584 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 SLC6A11P48066 632 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 EPHB1P54762 984 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 PPP2R2AP63151 447 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 EXOSC10Q01780 885 aaKnown RBP1.48□□□□□ -2.17
HIF1A-204ENST00000539097 MTERF2Q49AM1 385 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 KIAA1211LQ6NV74 962 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 BEND7Q8N7W2 519 aaPredicted RBP1.48□□□□□ -2.17
HIF1A-204ENST00000539097 CYB5D2Q8WUJ1 264 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 OSBP2Q969R2 916 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 ISL2Q96A47 359 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 FANCD2OSQ96PS1 177 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 WRNIP1Q96S55 665 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 EIF2AQ9BY44 585 aaKnown RBP1.48□□□□□ -2.17
HIF1A-204ENST00000539097 TRIM55Q9BYV6 548 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 IRF2BPLQ9H1B7 796 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 CAAP1Q9H8G2 361 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 SLC52A2Q9HAB3 445 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 RXFP3Q9NSD7 469 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 WHRNQ9P202 907 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 USP36Q9P275 1121 aaKnown RBP1.48□□□□□ -2.17
HIF1A-204ENST00000539097 ACTL7BQ9Y614 415 aa1.48□□□□□ -2.17
HIF1A-204ENST00000539097 GSTA4O15217 222 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms