RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 SLC38A10Q9HBR0 1119 aa27.2■■□□□ 1.95
TMEM260-202ENST00000538838 SEC63Q9UGP8 760 aaKnown RBP27.2■■□□□ 1.95
TMEM260-202ENST00000538838 ADAMTS5Q9UNA0 930 aa27.2■■□□□ 1.95
TMEM260-202ENST00000538838 SMC3Q9UQE7 1217 aa27.2■■□□□ 1.95
TMEM260-202ENST00000538838 ZBTB5O15062 677 aa27.19■■□□□ 1.94
TMEM260-202ENST00000538838 PKN1Q16512 942 aa27.19■■□□□ 1.94
TMEM260-202ENST00000538838 ZCCHC17Q9NP64 241 aaKnown RBP27.19■■□□□ 1.94
TMEM260-202ENST00000538838 PPP1R11O60927 126 aaPredicted RBP27.19■■□□□ 1.94
TMEM260-202ENST00000538838 DEXIO95424 95 aa27.19■■□□□ 1.94
TMEM260-202ENST00000538838 GJB2P29033 226 aa27.19■■□□□ 1.94
TMEM260-202ENST00000538838 HMGN5P82970 282 aaKnown RBP27.19■■□□□ 1.94
TMEM260-202ENST00000538838 REPS2Q8NFH8 660 aa27.19■■□□□ 1.94
TMEM260-202ENST00000538838 PARK7Q99497 189 aaKnown RBP27.19■■□□□ 1.94
TMEM260-202ENST00000538838 PEX10O60683 326 aa27.18■■□□□ 1.94
TMEM260-202ENST00000538838 TAL1P17542 331 aaPredicted RBP27.18■■□□□ 1.94
TMEM260-202ENST00000538838 SMCR8Q8TEV9 937 aaPredicted RBP27.18■■□□□ 1.94
TMEM260-202ENST00000538838 GPKOWQ92917 476 aaPredicted RBP eCLIP27.18■■□□□ 1.94
TMEM260-202ENST00000538838 AIFM3Q96NN9 605 aa27.18■■□□□ 1.94
TMEM260-202ENST00000538838 RBM27Q9P2N5 1060 aaKnown RBP27.18■■□□□ 1.94
TMEM260-202ENST00000538838 PNMA6FA0A0J9YX94 578 aa27.17■■□□□ 1.94
TMEM260-202ENST00000538838 ZBED4O75132 1171 aa27.17■■□□□ 1.94
TMEM260-202ENST00000538838 SCG2P13521 617 aa27.17■■□□□ 1.94
TMEM260-202ENST00000538838 TAF1CQ15572 869 aaPredicted RBP27.17■■□□□ 1.94
TMEM260-202ENST00000538838 PFKFB3Q16875 520 aaPredicted RBP27.17■■□□□ 1.94
TMEM260-202ENST00000538838 OTUD7BQ6GQQ9 843 aa27.17■■□□□ 1.94
TMEM260-202ENST00000538838 LBX2Q6XYB7 198 aa27.17■■□□□ 1.94
TMEM260-202ENST00000538838 CTDP1Q9Y5B0 961 aaPredicted RBP27.17■■□□□ 1.94
TMEM260-202ENST00000538838 RBBP6Q7Z6E9 1792 aaKnown RBP27.17■■□□□ 1.94
TMEM260-202ENST00000538838 ZNF536O15090 1300 aa27.17■■□□□ 1.94
TMEM260-202ENST00000538838 FDX1P10109 184 aa27.16■■□□□ 1.94
TMEM260-202ENST00000538838 MAP2K2P36507 400 aa27.16■■□□□ 1.94
TMEM260-202ENST00000538838 CPXCR1Q8N123 301 aa27.16■■□□□ 1.94
TMEM260-202ENST00000538838 PAGR1Q9BTK6 254 aa27.16■■□□□ 1.94
TMEM260-202ENST00000538838 RAVER2Q9HCJ3 691 aaKnown RBP27.16■■□□□ 1.94
TMEM260-202ENST00000538838 TMEM132BQ14DG7 1078 aa27.16■■□□□ 1.94
TMEM260-202ENST00000538838 WWC2Q6AWC2 1192 aa27.16■■□□□ 1.94
TMEM260-202ENST00000538838 HEATR3Q7Z4Q2 680 aa27.16■■□□□ 1.94
TMEM260-202ENST00000538838 FAM184AQ8NB25 1140 aa27.16■■□□□ 1.94
TMEM260-202ENST00000538838 BTBD7Q9P203 1132 aa27.16■■□□□ 1.94
TMEM260-202ENST00000538838 ZNF214Q9UL59 606 aaPredicted RBP27.16■■□□□ 1.94
TMEM260-202ENST00000538838 FOSBP53539 338 aa27.15■■□□□ 1.94
TMEM260-202ENST00000538838 USH1GQ495M9 461 aa27.15■■□□□ 1.94
TMEM260-202ENST00000538838 FBXO11Q86XK2 927 aa27.15■■□□□ 1.94
TMEM260-202ENST00000538838 REM2Q8IYK8 340 aaPredicted RBP27.15■■□□□ 1.94
TMEM260-202ENST00000538838 MB21D1Q8N884 522 aa27.15■■□□□ 1.94
TMEM260-202ENST00000538838 AGBL1Q96MI9 1066 aa27.15■■□□□ 1.94
TMEM260-202ENST00000538838 ALG1Q9BT22 464 aa27.15■■□□□ 1.94
TMEM260-202ENST00000538838 TXNRD2Q9NNW7 524 aa27.15■■□□□ 1.94
TMEM260-202ENST00000538838 DAXXQ9UER7 740 aaPredicted RBP27.15■■□□□ 1.94
TMEM260-202ENST00000538838 CNMDO75829 334 aa27.14■■□□□ 1.94
TMEM260-202ENST00000538838 ICAM1P05362 532 aa27.14■■□□□ 1.94
TMEM260-202ENST00000538838 RBPJLQ9UBG7 517 aa27.14■■□□□ 1.94
TMEM260-202ENST00000538838 ADGRA2Q96PE1 1338 aa27.14■■□□□ 1.93
TMEM260-202ENST00000538838 GTF3C2Q8WUA4 911 aaPredicted RBP27.13■■□□□ 1.93
TMEM260-202ENST00000538838 WASF1Q92558 559 aa27.13■■□□□ 1.93
TMEM260-202ENST00000538838 COA7Q96BR5 231 aa27.13■■□□□ 1.93
TMEM260-202ENST00000538838 SHISA4Q96DD7 197 aa27.13■■□□□ 1.93
TMEM260-202ENST00000538838 IPO9Q96P70 1041 aaKnown RBP27.13■■□□□ 1.93
TMEM260-202ENST00000538838 AMNQ9BXJ7 453 aa27.13■■□□□ 1.93
TMEM260-202ENST00000538838 CCPG1Q9ULG6 757 aa27.13■■□□□ 1.93
TMEM260-202ENST00000538838 PLS1Q14651 629 aa27.12■■□□□ 1.93
TMEM260-202ENST00000538838 GJB4Q9NTQ9 266 aa27.12■■□□□ 1.93
TMEM260-202ENST00000538838 VPS54Q9P1Q0 977 aa27.12■■□□□ 1.93
TMEM260-202ENST00000538838 STXBP3O00186 592 aa27.12■■□□□ 1.93
TMEM260-202ENST00000538838 OAZ1P54368 228 aa27.12■■□□□ 1.93
TMEM260-202ENST00000538838 CRHR2Q13324 411 aa27.12■■□□□ 1.93
TMEM260-202ENST00000538838 SNRNP48Q6IEG0 339 aaKnown RBP27.12■■□□□ 1.93
TMEM260-202ENST00000538838 TYW1BQ6NUM6 668 aa27.12■■□□□ 1.93
TMEM260-202ENST00000538838 BARHL2Q9NY43 387 aa27.12■■□□□ 1.93
TMEM260-202ENST00000538838 RABGAP1Q9Y3P9 1069 aa27.12■■□□□ 1.93
TMEM260-202ENST00000538838 PCDHA1Q9Y5I3 950 aa27.12■■□□□ 1.93
TMEM260-202ENST00000538838 GCLCP48506 637 aaPredicted RBP27.11■■□□□ 1.93
TMEM260-202ENST00000538838 ANKRD13CQ8N6S4 541 aa27.11■■□□□ 1.93
TMEM260-202ENST00000538838 TEX13BQ9BXU2 312 aa27.11■■□□□ 1.93
TMEM260-202ENST00000538838 ATP2A1O14983 1001 aa27.1■■□□□ 1.93
TMEM260-202ENST00000538838 ALDH1A1P00352 501 aa27.1■■□□□ 1.93
TMEM260-202ENST00000538838 ZFYVE28Q9HCC9 887 aa27.1■■□□□ 1.93
TMEM260-202ENST00000538838 KIF3AQ9Y496 699 aa27.1■■□□□ 1.93
TMEM260-202ENST00000538838 hCG_1984214I3L0E3 225 aa27.09■■□□□ 1.93
TMEM260-202ENST00000538838 STAT3P40763 770 aa27.09■■□□□ 1.93
TMEM260-202ENST00000538838 NAPAP54920 295 aa27.09■■□□□ 1.93
TMEM260-202ENST00000538838 ERVK-9P63128 1117 aa27.09■■□□□ 1.93
TMEM260-202ENST00000538838 ERVK-24P63145 666 aa27.09■■□□□ 1.93
TMEM260-202ENST00000538838 ZNF713Q8N859 430 aaPredicted RBP27.09■■□□□ 1.93
TMEM260-202ENST00000538838 SPATC1LQ9H0A9 340 aa27.09■■□□□ 1.93
TMEM260-202ENST00000538838 HOMER2Q9NSB8 354 aa27.09■■□□□ 1.93
TMEM260-202ENST00000538838 CPA4Q9UI42 421 aa27.09■■□□□ 1.93
TMEM260-202ENST00000538838 RIPK3Q9Y572 518 aa27.09■■□□□ 1.93
TMEM260-202ENST00000538838 CA12O43570 354 aa27.08■■□□□ 1.93
TMEM260-202ENST00000538838 ALAS1P13196 640 aa27.08■■□□□ 1.93
TMEM260-202ENST00000538838 C8orf76Q96K31 380 aa27.08■■□□□ 1.93
TMEM260-202ENST00000538838 CEP350Q5VT06 3117 aa27.08■■□□□ 1.93
TMEM260-202ENST00000538838 ABCB11O95342 1321 aa27.08■■□□□ 1.93
TMEM260-202ENST00000538838 TLR2O60603 784 aa27.08■■□□□ 1.93
TMEM260-202ENST00000538838 Q3C1V9 767 aa27.08■■□□□ 1.93
TMEM260-202ENST00000538838 MORF4L1Q9UBU8 362 aa27.08■■□□□ 1.93
TMEM260-202ENST00000538838 GUCY1B3Q02153 619 aa27.07■■□□□ 1.92
TMEM260-202ENST00000538838 PPP1R18Q6NYC8 613 aa27.07■■□□□ 1.92
TMEM260-202ENST00000538838 MOV10L1Q9BXT6 1211 aaKnown RBP27.07■■□□□ 1.92
TMEM260-202ENST00000538838 SH3GLB2Q9NR46 395 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms