RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	ACAD9	Q9H845	621 aa		14.44	□□□□□ -0.1
CLTCL1-205	ENST00000538828	RAVER2	Q9HCJ3	691 aa	Known RBP	14.44	□□□□□ -0.1
CLTCL1-205	ENST00000538828	RIPK3	Q9Y572	518 aa		14.44	□□□□□ -0.1
CLTCL1-205	ENST00000538828	PFAS	O15067	1338 aa		14.43	□□□□□ -0.1
CLTCL1-205	ENST00000538828	SEPT4	O43236	478 aa		14.43	□□□□□ -0.1
CLTCL1-205	ENST00000538828	CCDC96	Q2M329	555 aa		14.43	□□□□□ -0.1
CLTCL1-205	ENST00000538828	ASPRV1	Q53RT3	343 aa		14.43	□□□□□ -0.1
CLTCL1-205	ENST00000538828	SYDE2	Q5VT97	1194 aa		14.43	□□□□□ -0.1
CLTCL1-205	ENST00000538828	NCOA7	Q8NI08	942 aa		14.43	□□□□□ -0.1
CLTCL1-205	ENST00000538828	DDX11	Q96FC9	970 aa		14.43	□□□□□ -0.1
CLTCL1-205	ENST00000538828	TINF2	Q9BSI4	451 aa		14.43	□□□□□ -0.1
CLTCL1-205	ENST00000538828	KAT14	Q9H8E8	782 aa		14.43	□□□□□ -0.1
CLTCL1-205	ENST00000538828	DDX20	Q9UHI6	824 aa	Known RBP	14.43	□□□□□ -0.1
CLTCL1-205	ENST00000538828	TNKS	O95271	1327 aa		14.42	□□□□□ -0.1
CLTCL1-205	ENST00000538828	CCND3	P30281	292 aa	Predicted RBP	14.42	□□□□□ -0.1
CLTCL1-205	ENST00000538828	CYP2C19	P33261	490 aa		14.42	□□□□□ -0.1
CLTCL1-205	ENST00000538828	SART3	Q15020	963 aa	Known RBP	14.42	□□□□□ -0.1
CLTCL1-205	ENST00000538828	SEC23A	Q15436	765 aa		14.42	□□□□□ -0.1
CLTCL1-205	ENST00000538828	CASC1	Q6TDU7	716 aa		14.42	□□□□□ -0.1
CLTCL1-205	ENST00000538828	LSG1	Q9H089	658 aa	Known RBP	14.42	□□□□□ -0.1
CLTCL1-205	ENST00000538828		E7EWF7	191 aa		14.41	□□□□□ -0.1
CLTCL1-205	ENST00000538828	MNX1	P50219	401 aa	Predicted RBP	14.41	□□□□□ -0.1
CLTCL1-205	ENST00000538828	NECTIN1	Q15223	517 aa		14.41	□□□□□ -0.1
CLTCL1-205	ENST00000538828	IFIT1B	Q5T764	474 aa	Known RBP	14.41	□□□□□ -0.1
CLTCL1-205	ENST00000538828	RALYL	Q86SE5	291 aa	Known RBP	14.41	□□□□□ -0.1
CLTCL1-205	ENST00000538828	ANKRD35	Q8N283	1001 aa		14.41	□□□□□ -0.1
CLTCL1-205	ENST00000538828	RNF146	Q9NTX7	359 aa		14.41	□□□□□ -0.1
CLTCL1-205	ENST00000538828	ISY1	Q9ULR0	285 aa	Known RBP	14.41	□□□□□ -0.1
CLTCL1-205	ENST00000538828	RBM8A	Q9Y5S9	174 aa	Known RBP	14.41	□□□□□ -0.1
CLTCL1-205	ENST00000538828	FRMPD3	Q5JV73	1810 aa		14.41	□□□□□ -0.1
CLTCL1-205	ENST00000538828	ERICH2	A1L162	156 aa		14.4	□□□□□ -0.1
CLTCL1-205	ENST00000538828	CENPB	P07199	599 aa	Predicted RBP	14.4	□□□□□ -0.1
CLTCL1-205	ENST00000538828	COL6A1	P12109	1028 aa		14.4	□□□□□ -0.1
CLTCL1-205	ENST00000538828	TTBK2	Q6IQ55	1244 aa		14.4	□□□□□ -0.1
CLTCL1-205	ENST00000538828	TMTC2	Q8N394	836 aa		14.4	□□□□□ -0.1
CLTCL1-205	ENST00000538828	FAM133A	Q8N9E0	248 aa		14.4	□□□□□ -0.1
CLTCL1-205	ENST00000538828	ARRDC4	Q8NCT1	418 aa		14.4	□□□□□ -0.1
CLTCL1-205	ENST00000538828	RGS22	Q8NE09	1264 aa		14.4	□□□□□ -0.1
CLTCL1-205	ENST00000538828	TRPV1	Q8NER1	839 aa		14.4	□□□□□ -0.1
CLTCL1-205	ENST00000538828	AGBL1	Q96MI9	1066 aa		14.4	□□□□□ -0.1
CLTCL1-205	ENST00000538828	TRERF1	Q96PN7	1200 aa		14.4	□□□□□ -0.1
CLTCL1-205	ENST00000538828	MAP3K14	Q99558	947 aa		14.4	□□□□□ -0.1
CLTCL1-205	ENST00000538828	ZKSCAN3	Q9BRR0	538 aa		14.4	□□□□□ -0.1
CLTCL1-205	ENST00000538828	A1CF	Q9NQ94	594 aa	Known RBP	14.4	□□□□□ -0.1
CLTCL1-205	ENST00000538828	CCPG1	Q9ULG6	757 aa		14.4	□□□□□ -0.1
CLTCL1-205	ENST00000538828	CNPY2	Q9Y2B0	182 aa		14.4	□□□□□ -0.1
CLTCL1-205	ENST00000538828	SMCHD1	A6NHR9	2005 aa		14.4	□□□□□ -0.1
CLTCL1-205	ENST00000538828	ASB14	A6NK59	587 aa		14.39	□□□□□ -0.11
CLTCL1-205	ENST00000538828	DNM1L	O00429	736 aa		14.39	□□□□□ -0.11
CLTCL1-205	ENST00000538828	EPB41L2	O43491	1005 aa	Known RBP	14.39	□□□□□ -0.11
CLTCL1-205	ENST00000538828	CDC45	O75419	566 aa		14.39	□□□□□ -0.11
CLTCL1-205	ENST00000538828	PGK2	P07205	417 aa		14.39	□□□□□ -0.11
CLTCL1-205	ENST00000538828	PARP1	P09874	1014 aa	Known RBP	14.39	□□□□□ -0.11
CLTCL1-205	ENST00000538828	TSGA10IP	Q3SY00	556 aa		14.39	□□□□□ -0.11
CLTCL1-205	ENST00000538828	RNF20	Q5VTR2	975 aa		14.39	□□□□□ -0.11
CLTCL1-205	ENST00000538828	CYB5R4	Q7L1T6	521 aa		14.39	□□□□□ -0.11
CLTCL1-205	ENST00000538828	MB21D2	Q8IYB1	491 aa	Predicted RBP	14.39	□□□□□ -0.11
CLTCL1-205	ENST00000538828	PAWR	Q96IZ0	340 aa	Known RBP	14.39	□□□□□ -0.11
CLTCL1-205	ENST00000538828	ABHD16B	Q9H3Z7	469 aa		14.39	□□□□□ -0.11
CLTCL1-205	ENST00000538828	NR2E3	Q9Y5X4	410 aa		14.39	□□□□□ -0.11
CLTCL1-205	ENST00000538828	POTEB2	H3BUK9	544 aa		14.38	□□□□□ -0.11
CLTCL1-205	ENST00000538828	ZNF865	P0CJ78	1059 aa	Predicted RBP	14.38	□□□□□ -0.11
CLTCL1-205	ENST00000538828	ALAS1	P13196	640 aa		14.38	□□□□□ -0.11
CLTCL1-205	ENST00000538828	AKR1A1	P14550	325 aa		14.38	□□□□□ -0.11
CLTCL1-205	ENST00000538828	SLC16A2	P36021	539 aa		14.38	□□□□□ -0.11
CLTCL1-205	ENST00000538828	TRAF1	Q13077	416 aa		14.38	□□□□□ -0.11
CLTCL1-205	ENST00000538828	SAMD3	Q8N6K7	520 aa		14.38	□□□□□ -0.11
CLTCL1-205	ENST00000538828	MORC4	Q8TE76	937 aa		14.38	□□□□□ -0.11
CLTCL1-205	ENST00000538828	TMEM87B	Q96K49	555 aa		14.38	□□□□□ -0.11
CLTCL1-205	ENST00000538828	C11orf49	Q9H6J7	331 aa		14.38	□□□□□ -0.11
CLTCL1-205	ENST00000538828	GPCPD1	Q9NPB8	672 aa		14.38	□□□□□ -0.11
CLTCL1-205	ENST00000538828	CYP39A1	Q9NYL5	469 aa		14.38	□□□□□ -0.11
CLTCL1-205	ENST00000538828	FRMPD2	Q68DX3	1309 aa	Predicted RBP	14.38	□□□□□ -0.11
CLTCL1-205	ENST00000538828	IFIT3	O14879	490 aa	Known RBP	14.37	□□□□□ -0.11
CLTCL1-205	ENST00000538828	SNAI1	O95863	264 aa	Predicted RBP	14.37	□□□□□ -0.11
CLTCL1-205	ENST00000538828	SMARCA1	P28370	1054 aa		14.37	□□□□□ -0.11
CLTCL1-205	ENST00000538828	CNGA1	P29973	690 aa		14.37	□□□□□ -0.11
CLTCL1-205	ENST00000538828	LIFR	P42702	1097 aa		14.37	□□□□□ -0.11
CLTCL1-205	ENST00000538828	NKX3-2	P78367	333 aa		14.37	□□□□□ -0.11
CLTCL1-205	ENST00000538828	WTAP	Q15007	396 aa		14.37	□□□□□ -0.11
CLTCL1-205	ENST00000538828	RASGRP2	Q7LDG7	609 aa		14.37	□□□□□ -0.11
CLTCL1-205	ENST00000538828	IGDCC4	Q8TDY8	1250 aa		14.37	□□□□□ -0.11
CLTCL1-205	ENST00000538828	MTMR8	Q96EF0	704 aa		14.37	□□□□□ -0.11
CLTCL1-205	ENST00000538828	FGD4	Q96M96	766 aa		14.37	□□□□□ -0.11
CLTCL1-205	ENST00000538828	PPP4R2	Q9NY27	417 aa		14.37	□□□□□ -0.11
CLTCL1-205	ENST00000538828	MAP3K20	Q9NYL2	800 aa	Known RBP	14.37	□□□□□ -0.11
CLTCL1-205	ENST00000538828	ADD3	Q9UEY8	706 aa	Known RBP	14.37	□□□□□ -0.11
CLTCL1-205	ENST00000538828	MTMR7	Q9Y216	660 aa		14.37	□□□□□ -0.11
CLTCL1-205	ENST00000538828	PALM3	A6NDB9	673 aa	Predicted RBP	14.36	□□□□□ -0.11
CLTCL1-205	ENST00000538828	SLC27A2	O14975	620 aa		14.36	□□□□□ -0.11
CLTCL1-205	ENST00000538828	RARB	P10826	455 aa		14.36	□□□□□ -0.11
CLTCL1-205	ENST00000538828	MCM5	P33992	734 aa		14.36	□□□□□ -0.11
CLTCL1-205	ENST00000538828	TROAP	Q12815	778 aa		14.36	□□□□□ -0.11
CLTCL1-205	ENST00000538828	CREB3L3	Q68CJ9	461 aa		14.36	□□□□□ -0.11
CLTCL1-205	ENST00000538828	CCDC174	Q6PII3	467 aa		14.36	□□□□□ -0.11
CLTCL1-205	ENST00000538828	STOX1	Q6ZVD7	989 aa		14.36	□□□□□ -0.11
CLTCL1-205	ENST00000538828	DNER	Q8NFT8	737 aa		14.36	□□□□□ -0.11
CLTCL1-205	ENST00000538828	ANO2	Q9NQ90	1003 aa		14.36	□□□□□ -0.11
CLTCL1-205	ENST00000538828	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	14.36	□□□□□ -0.11
CLTCL1-205	ENST00000538828	FAM184B	Q9ULE4	1060 aa		14.36	□□□□□ -0.11

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