RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 GCNT3O95395 438 aa7.56□□□□□ -1.2
SORT1-209ENST00000538502 CUL4BQ13620 913 aa7.56□□□□□ -1.2
SORT1-209ENST00000538502 NBPF20Q3BBV1 942 aa7.56□□□□□ -1.2
SORT1-209ENST00000538502 MMEL1Q495T6 779 aa7.56□□□□□ -1.2
SORT1-209ENST00000538502 TEDDM1Q5T9Z0 273 aa7.56□□□□□ -1.2
SORT1-209ENST00000538502 GAS2L3Q86XJ1 694 aa7.56□□□□□ -1.2
SORT1-209ENST00000538502 VSTM4Q8IW00 320 aa7.56□□□□□ -1.2
SORT1-209ENST00000538502 TRMT44Q8IYL2 757 aaKnown RBP7.56□□□□□ -1.2
SORT1-209ENST00000538502 PHF23Q9BUL5 403 aaPredicted RBP7.56□□□□□ -1.2
SORT1-209ENST00000538502 IPO11Q9UI26 975 aaKnown RBP7.56□□□□□ -1.2
SORT1-209ENST00000538502 CD109Q6YHK3 1445 aa7.56□□□□□ -1.2
SORT1-209ENST00000538502 ARHGAP10A1A4S6 786 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 HEXIM1O94992 359 aaKnown RBP7.55□□□□□ -1.2
SORT1-209ENST00000538502 CHGBP05060 677 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 CPA1P15085 419 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 TXKP42681 527 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 BPIFB4P59827 614 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 E2F5Q15329 346 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 ATG16L1Q676U5 607 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 CASC4Q6P4E1 433 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 TSPYL6Q8N831 410 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 CXorf38Q8TB03 319 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 FAM212AQ96EL1 285 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 THAP9Q9H5L6 903 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 STOML1Q9UBI4 398 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 SBNO1A3KN83 1393 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 MED23Q9ULK4 1368 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 GRIN2AQ12879 1464 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 SYCP2Q9BX26 1530 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 IPO5O00410 1097 aaKnown RBP7.55□□□□□ -1.2
SORT1-209ENST00000538502 CTNND1O60716 968 aaKnown RBP7.55□□□□□ -1.2
SORT1-209ENST00000538502 DDAH1O94760 285 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 PSMB7Q99436 277 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 PCDHA7Q9UN72 937 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 TRPC6Q9Y210 931 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 EDC4Q6P2E9 1401 aaKnown RBP7.55□□□□□ -1.2
SORT1-209ENST00000538502 ADCY9O60503 1353 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 STAM2O75886 525 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 INHBAP08476 426 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 RWDD2BP57060 319 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 GRAMD4Q6IC98 578 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 MYCT1Q8N699 235 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 AK8Q96MA6 479 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 TESK2Q96S53 571 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 RWDD2AQ9UIY3 292 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 ARHGEF10O15013 1369 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 CCDC188H7C350 402 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 HGSO14964 777 aaPredicted RBP7.55□□□□□ -1.2
SORT1-209ENST00000538502 EEF1DP29692 281 aaKnown RBP7.55□□□□□ -1.2
SORT1-209ENST00000538502 NBPF5PQ86XG9 351 aaPredicted RBP7.55□□□□□ -1.2
SORT1-209ENST00000538502 TEX11Q8IYF3 940 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 SCYL3Q8IZE3 742 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 ABTB1Q969K4 478 aaPredicted RBP7.55□□□□□ -1.2
SORT1-209ENST00000538502 TRIM56Q9BRZ2 755 aaKnown RBP7.55□□□□□ -1.2
SORT1-209ENST00000538502 DPH5Q9H2P9 285 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 FOXP1Q9H334 677 aaPredicted RBP7.55□□□□□ -1.2
SORT1-209ENST00000538502 C19orf44Q9H6X5 657 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 ATP8A2Q9NTI2 1148 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 PER1O15534 1290 aaPredicted RBP7.55□□□□□ -1.2
SORT1-209ENST00000538502 RXRAP19793 462 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 STX1BP61266 288 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 AOC3Q16853 763 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 ENOX1Q8TC92 643 aaKnown RBP7.55□□□□□ -1.2
SORT1-209ENST00000538502 NEK9Q8TD19 979 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 OSBPL3Q9H4L5 887 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 EPB41L5Q9HCM4 733 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 MAPK8IP1Q9UQF2 711 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 USTQ9Y2C2 406 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 MROH5Q6ZUA9 1318 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 WDR46O15213 610 aaKnown RBP7.55□□□□□ -1.2
SORT1-209ENST00000538502 SPAG7O75391 227 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 MAP3K7CLP57077 242 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 MUM1L1Q5H9M0 696 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 NXNQ6DKJ4 435 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 FBXO38Q6PIJ6 1188 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 ANTXR1Q9H6X2 564 aa7.55□□□□□ -1.2
SORT1-209ENST00000538502 NCOA5Q9HCD5 579 aaKnown RBP7.55□□□□□ -1.2
SORT1-209ENST00000538502 ARMCX3Q9UH62 379 aaPredicted RBP7.55□□□□□ -1.2
SORT1-209ENST00000538502 ABCC12Q96J65 1359 aa7.54□□□□□ -1.2
SORT1-209ENST00000538502 RASSF10A6NK89 507 aa7.54□□□□□ -1.2
SORT1-209ENST00000538502 PPM1FP49593 454 aaPredicted RBP7.54□□□□□ -1.2
SORT1-209ENST00000538502 OCA2Q04671 838 aa7.54□□□□□ -1.2
SORT1-209ENST00000538502 KRT39Q6A163 491 aa7.54□□□□□ -1.2
SORT1-209ENST00000538502 RSBN1LQ6PCB5 846 aaPredicted RBP7.54□□□□□ -1.2
SORT1-209ENST00000538502 DPH6Q7L8W6 267 aa7.54□□□□□ -1.2
SORT1-209ENST00000538502 ZCRB1Q8TBF4 217 aaKnown RBP7.54□□□□□ -1.2
SORT1-209ENST00000538502 HAUS7Q99871 368 aa7.54□□□□□ -1.2
SORT1-209ENST00000538502 FANCAO15360 1455 aa7.54□□□□□ -1.2
SORT1-209ENST00000538502 SYNMO15061 1565 aa7.54□□□□□ -1.2
SORT1-209ENST00000538502 IRS4O14654 1257 aaPredicted RBP7.54□□□□□ -1.2
SORT1-209ENST00000538502 ECEL1O95672 775 aa7.54□□□□□ -1.2
SORT1-209ENST00000538502 ZFXP17010 805 aaPredicted RBP7.54□□□□□ -1.2
SORT1-209ENST00000538502 POLR2BP30876 1174 aaKnown RBP7.54□□□□□ -1.2
SORT1-209ENST00000538502 NDUFA8P51970 172 aa7.54□□□□□ -1.2
SORT1-209ENST00000538502 KRT81Q14533 505 aa7.54□□□□□ -1.2
SORT1-209ENST00000538502 SPDL1Q96EA4 605 aa7.54□□□□□ -1.2
SORT1-209ENST00000538502 USP28Q96RU2 1077 aa7.54□□□□□ -1.2
SORT1-209ENST00000538502 ZC4H2Q9NQZ6 224 aa7.54□□□□□ -1.2
SORT1-209ENST00000538502 ZNF277Q9NRM2 450 aaPredicted RBP7.54□□□□□ -1.2
SORT1-209ENST00000538502 STAP2Q9UGK3 403 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms