RNA–Protein interactions for RNA: ENST00000538494.1

SP140-212, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 629 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-212ENST00000538494 PPM1EQ8WY54 764 aa6.98□□□□□ -1.29
SP140-212ENST00000538494 HERVK_113Q902F9 699 aa6.98□□□□□ -1.29
SP140-212ENST00000538494 RNPC3Q96LT9 517 aaKnown RBP6.98□□□□□ -1.29
SP140-212ENST00000538494 PRDM12Q9H4Q4 367 aa6.98□□□□□ -1.29
SP140-212ENST00000538494 GREM2Q9H772 168 aa6.98□□□□□ -1.29
SP140-212ENST00000538494 CHPF2Q9P2E5 772 aa6.98□□□□□ -1.29
SP140-212ENST00000538494 TSPYL4Q9UJ04 414 aa6.98□□□□□ -1.29
SP140-212ENST00000538494 MYH3P11055 1940 aa6.97□□□□□ -1.29
SP140-212ENST00000538494 FAM86C2PA6NEL3 165 aa6.97□□□□□ -1.29
SP140-212ENST00000538494 DNM1LO00429 736 aa6.97□□□□□ -1.29
SP140-212ENST00000538494 PTPRAP18433 802 aa6.97□□□□□ -1.29
SP140-212ENST00000538494 CCND3P30281 292 aaPredicted RBP6.97□□□□□ -1.29
SP140-212ENST00000538494 CRKP46108 304 aa6.97□□□□□ -1.29
SP140-212ENST00000538494 GCLCP48506 637 aaPredicted RBP6.97□□□□□ -1.29
SP140-212ENST00000538494 C4orf17Q53FE4 359 aa6.97□□□□□ -1.29
SP140-212ENST00000538494 APOBEC3HQ6NTF7 200 aaKnown RBP6.97□□□□□ -1.29
SP140-212ENST00000538494 TDRD7Q8NHU6 1098 aaKnown RBP6.97□□□□□ -1.29
SP140-212ENST00000538494 LPAR1Q92633 364 aa6.97□□□□□ -1.29
SP140-212ENST00000538494 CCDC85AQ96PX6 553 aaPredicted RBP6.97□□□□□ -1.29
SP140-212ENST00000538494 PBX4Q9BYU1 374 aa6.97□□□□□ -1.29
SP140-212ENST00000538494 CD320Q9NPF0 282 aa6.97□□□□□ -1.29
SP140-212ENST00000538494 HYPKQ9NX55 129 aa6.97□□□□□ -1.29
SP140-212ENST00000538494 DBF4Q9UBU7 674 aaPredicted RBP6.97□□□□□ -1.29
SP140-212ENST00000538494 MORF4L1Q9UBU8 362 aa6.97□□□□□ -1.29
SP140-212ENST00000538494 MYO15AQ9UKN7 3530 aa6.97□□□□□ -1.29
SP140-212ENST00000538494 TIMELESSQ9UNS1 1208 aa6.97□□□□□ -1.29
SP140-212ENST00000538494 TTF2Q9UNY4 1162 aaKnown RBP6.97□□□□□ -1.29
SP140-212ENST00000538494 AGTPBP1Q9UPW5 1226 aa6.97□□□□□ -1.29
SP140-212ENST00000538494 PHIPQ8WWQ0 1821 aa6.97□□□□□ -1.29
SP140-212ENST00000538494 CFAP47Q6ZTR5 3102 aa6.96□□□□□ -1.29
SP140-212ENST00000538494 PLXNA1Q9UIW2 1896 aa6.96□□□□□ -1.29
SP140-212ENST00000538494 TPRP12270 2363 aaKnown RBP6.96□□□□□ -1.29
SP140-212ENST00000538494 SNAP23O00161 211 aa6.96□□□□□ -1.3
SP140-212ENST00000538494 KIAA0355O15063 1070 aa6.96□□□□□ -1.3
SP140-212ENST00000538494 MSCO60682 206 aa6.96□□□□□ -1.3
SP140-212ENST00000538494 CSF1RP07333 972 aa6.96□□□□□ -1.3
SP140-212ENST00000538494 ARAFP10398 606 aa6.96□□□□□ -1.3
SP140-212ENST00000538494 CHRNDQ07001 517 aa6.96□□□□□ -1.3
SP140-212ENST00000538494 CCDC85BQ15834 202 aaPredicted RBP6.96□□□□□ -1.3
SP140-212ENST00000538494 NFE2L2Q16236 605 aa6.96□□□□□ -1.3
SP140-212ENST00000538494 MFSD14BQ5SR56 506 aa6.96□□□□□ -1.3
SP140-212ENST00000538494 CHSY3Q70JA7 882 aa6.96□□□□□ -1.3
SP140-212ENST00000538494 MIGA2Q7L4E1 593 aa6.96□□□□□ -1.3
SP140-212ENST00000538494 ERMP1Q7Z2K6 904 aa6.96□□□□□ -1.3
SP140-212ENST00000538494 SMCR8Q8TEV9 937 aaPredicted RBP6.96□□□□□ -1.3
SP140-212ENST00000538494 FAM151AQ8WW52 585 aa6.96□□□□□ -1.3
SP140-212ENST00000538494 ZDHHC15Q96MV8 337 aa6.96□□□□□ -1.3
SP140-212ENST00000538494 PLA2G12BQ9BX93 195 aa6.96□□□□□ -1.3
SP140-212ENST00000538494 NDFIP2Q9NV92 336 aa6.96□□□□□ -1.3
SP140-212ENST00000538494 COG5Q9UP83 839 aa6.96□□□□□ -1.3
SP140-212ENST00000538494 DMDP11532 3685 aa6.96□□□□□ -1.3
SP140-212ENST00000538494 ATRNL1Q5VV63 1379 aa6.95□□□□□ -1.3
SP140-212ENST00000538494 SPEF2Q9C093 1822 aa6.95□□□□□ -1.3
SP140-212ENST00000538494 CHL1O00533 1208 aa6.95□□□□□ -1.3
SP140-212ENST00000538494 IGHMBP2P38935 993 aaKnown RBP6.95□□□□□ -1.3
SP140-212ENST00000538494 CC2D1BQ5T0F9 858 aaKnown RBP6.95□□□□□ -1.3
SP140-212ENST00000538494 ZNF804AQ7Z570 1209 aa6.95□□□□□ -1.3
SP140-212ENST00000538494 SOCS4Q8WXH5 440 aa6.95□□□□□ -1.3
SP140-212ENST00000538494 XAGE2Q96GT9 111 aa6.95□□□□□ -1.3
SP140-212ENST00000538494 CFAP53Q96M91 514 aa6.95□□□□□ -1.3
SP140-212ENST00000538494 CWC25Q9NXE8 425 aaPredicted RBP6.95□□□□□ -1.3
SP140-212ENST00000538494 TACC3Q9Y6A5 838 aa6.95□□□□□ -1.3
SP140-212ENST00000538494 ZHX2Q9Y6X8 837 aa6.95□□□□□ -1.3
SP140-212ENST00000538494 CHD6Q8TD26 2715 aa6.95□□□□□ -1.3
SP140-212ENST00000538494 FAM186AA6NE01 2351 aa6.95□□□□□ -1.3
SP140-212ENST00000538494 WDR87Q6ZQQ6 2873 aa6.94□□□□□ -1.3
SP140-212ENST00000538494 LRRC37A2A6NM11 1700 aa6.94□□□□□ -1.3
SP140-212ENST00000538494 HSPA5P11021 654 aaKnown RBP6.94□□□□□ -1.3
SP140-212ENST00000538494 CYP2B6P20813 491 aa6.94□□□□□ -1.3
SP140-212ENST00000538494 CACNB3P54284 484 aa6.94□□□□□ -1.3
SP140-212ENST00000538494 MCCD1P59942 119 aaPredicted RBP6.94□□□□□ -1.3
SP140-212ENST00000538494 GRIK5Q16478 980 aa6.94□□□□□ -1.3
SP140-212ENST00000538494 LCE3BQ5TA77 95 aa6.94□□□□□ -1.3
SP140-212ENST00000538494 C16orf59Q7L2K0 433 aa6.94□□□□□ -1.3
SP140-212ENST00000538494 SCYL3Q8IZE3 742 aa6.94□□□□□ -1.3
SP140-212ENST00000538494 BANK1Q8NDB2 785 aa6.94□□□□□ -1.3
SP140-212ENST00000538494 DDX20Q9UHI6 824 aaKnown RBP6.94□□□□□ -1.3
SP140-212ENST00000538494 ATP11BQ9Y2G3 1177 aa6.94□□□□□ -1.3
SP140-212ENST00000538494 HRH3Q9Y5N1 445 aa6.94□□□□□ -1.3
SP140-212ENST00000538494 UTYO14607 1347 aa6.94□□□□□ -1.3
SP140-212ENST00000538494 VPS13AQ96RL7 3174 aa6.94□□□□□ -1.3
SP140-212ENST00000538494 RSPO4Q2I0M5 234 aaPredicted RBP6.93□□□□□ -1.3
SP140-212ENST00000538494 KRT24Q2M2I5 525 aa6.93□□□□□ -1.3
SP140-212ENST00000538494 FOXD4L6Q3SYB3 417 aaPredicted RBP6.93□□□□□ -1.3
SP140-212ENST00000538494 TRIM60Q495X7 471 aa6.93□□□□□ -1.3
SP140-212ENST00000538494 TREML2Q5T2D2 321 aa6.93□□□□□ -1.3
SP140-212ENST00000538494 HHIPL2Q6UWX4 724 aa6.93□□□□□ -1.3
SP140-212ENST00000538494 FOXD4L3Q6VB84 417 aaPredicted RBP6.93□□□□□ -1.3
SP140-212ENST00000538494 JARID2Q92833 1246 aaPredicted RBP6.93□□□□□ -1.3
SP140-212ENST00000538494 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.93□□□□□ -1.3
SP140-212ENST00000538494 METTL22Q9BUU2 404 aaPredicted RBP6.93□□□□□ -1.3
SP140-212ENST00000538494 PLVAPQ9BX97 442 aa6.93□□□□□ -1.3
SP140-212ENST00000538494 ZCCHC2Q9C0B9 1178 aaKnown RBP6.93□□□□□ -1.3
SP140-212ENST00000538494 A0A1B0GUL6 1792 aa6.92□□□□□ -1.3
SP140-212ENST00000538494 IGKV5-2P06315 115 aa6.92□□□□□ -1.3
SP140-212ENST00000538494 HOXC6P09630 235 aa6.92□□□□□ -1.3
SP140-212ENST00000538494 ALADP13716 330 aa6.92□□□□□ -1.3
SP140-212ENST00000538494 ZKSCAN1P17029 563 aaPredicted RBP6.92□□□□□ -1.3
SP140-212ENST00000538494 IGFBP4P22692 258 aa6.92□□□□□ -1.3
SP140-212ENST00000538494 TLE2Q04725 743 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms