RNA–Protein interactions for RNA: ENST00000538410.5

COPS7A-208, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3 BASIC

Gene COPS7A, Length 1,610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-208ENST00000538410 SHISA4Q96DD7 197 aa23.72■■□□□ 1.39
COPS7A-208ENST00000538410 MTMR8Q96EF0 704 aa23.72■■□□□ 1.39
COPS7A-208ENST00000538410 ZSCAN16Q9H4T2 348 aaPredicted RBP23.72■■□□□ 1.39
COPS7A-208ENST00000538410 EMILIN3Q9NT22 766 aa23.72■■□□□ 1.39
COPS7A-208ENST00000538410 CCL15-CCL14A0A0B4J2E2 113 aa23.71■■□□□ 1.39
COPS7A-208ENST00000538410 TRIM75PA6NK02 468 aa23.71■■□□□ 1.39
COPS7A-208ENST00000538410 CCDC85CA6NKD9 419 aa23.71■■□□□ 1.39
COPS7A-208ENST00000538410 C19orf81C9J6K1 198 aa23.71■■□□□ 1.39
COPS7A-208ENST00000538410 WDR46O15213 610 aaKnown RBP23.71■■□□□ 1.39
COPS7A-208ENST00000538410 FKTNO75072 461 aa23.71■■□□□ 1.39
COPS7A-208ENST00000538410 RESTQ13127 1097 aa23.71■■□□□ 1.39
COPS7A-208ENST00000538410 CCL15Q16663 113 aa23.71■■□□□ 1.39
COPS7A-208ENST00000538410 MCTP1Q6DN14 999 aa23.71■■□□□ 1.39
COPS7A-208ENST00000538410 SH3GLB2Q9NR46 395 aa23.71■■□□□ 1.39
COPS7A-208ENST00000538410 KCNJ14Q9UNX9 436 aa23.71■■□□□ 1.39
COPS7A-208ENST00000538410 ATP6V1DQ9Y5K8 247 aa23.71■■□□□ 1.39
COPS7A-208ENST00000538410 PLA2G6O60733 806 aa23.7■■□□□ 1.39
COPS7A-208ENST00000538410 MMP1P03956 469 aa23.7■■□□□ 1.39
COPS7A-208ENST00000538410 STAT2P52630 851 aa23.7■■□□□ 1.39
COPS7A-208ENST00000538410 IKQ13123 557 aaPredicted RBP23.7■■□□□ 1.39
COPS7A-208ENST00000538410 PPIL2Q13356 520 aa23.7■■□□□ 1.39
COPS7A-208ENST00000538410 SYDE2Q5VT97 1194 aa23.7■■□□□ 1.39
COPS7A-208ENST00000538410 BRI3BPQ8WY22 251 aa23.7■■□□□ 1.39
COPS7A-208ENST00000538410 GPKOWQ92917 476 aaPredicted RBP eCLIP23.7■■□□□ 1.39
COPS7A-208ENST00000538410 PHF20Q9BVI0 1012 aa23.7■■□□□ 1.39
COPS7A-208ENST00000538410 LOC285556D6RIA3 1793 aa23.7■■□□□ 1.38
COPS7A-208ENST00000538410 PNMA6FA0A0J9YX94 578 aa23.7■■□□□ 1.38
COPS7A-208ENST00000538410 PPATQ06203 517 aa23.7■■□□□ 1.38
COPS7A-208ENST00000538410 WWC2Q6AWC2 1192 aa23.7■■□□□ 1.38
COPS7A-208ENST00000538410 CHURC1Q8WUH1 139 aa23.7■■□□□ 1.38
COPS7A-208ENST00000538410 C12orf42Q96LP6 360 aa23.7■■□□□ 1.38
COPS7A-208ENST00000538410 GBP4Q96PP9 640 aa23.7■■□□□ 1.38
COPS7A-208ENST00000538410 BARHL2Q9NY43 387 aa23.7■■□□□ 1.38
COPS7A-208ENST00000538410 FEM1BQ9UK73 627 aa23.7■■□□□ 1.38
COPS7A-208ENST00000538410 hCG_1984214I3L0E3 225 aa23.69■■□□□ 1.38
COPS7A-208ENST00000538410 IRF6O14896 467 aa23.69■■□□□ 1.38
COPS7A-208ENST00000538410 BAG4O95429 457 aaKnown RBP23.69■■□□□ 1.38
COPS7A-208ENST00000538410 CETPP11597 493 aa23.69■■□□□ 1.38
COPS7A-208ENST00000538410 HEATR3Q7Z4Q2 680 aa23.69■■□□□ 1.38
COPS7A-208ENST00000538410 FAM160B2Q86V87 743 aa23.69■■□□□ 1.38
COPS7A-208ENST00000538410 FAM177A1Q8N128 213 aaPredicted RBP23.69■■□□□ 1.38
COPS7A-208ENST00000538410 ZNF713Q8N859 430 aaPredicted RBP23.69■■□□□ 1.38
COPS7A-208ENST00000538410 STXBP3O00186 592 aa23.68■■□□□ 1.38
COPS7A-208ENST00000538410 ZBTB5O15062 677 aa23.68■■□□□ 1.38
COPS7A-208ENST00000538410 VCAM1P19320 739 aa23.68■■□□□ 1.38
COPS7A-208ENST00000538410 CRHR2Q13324 411 aa23.68■■□□□ 1.38
COPS7A-208ENST00000538410 SNAPC2Q13487 334 aa23.68■■□□□ 1.38
COPS7A-208ENST00000538410 SAFBQ15424 915 aaKnown RBP eCLIP23.68■■□□□ 1.38
COPS7A-208ENST00000538410 PRR12Q9ULL5 1215 aa23.68■■□□□ 1.38
COPS7A-208ENST00000538410 RLFQ13129 1914 aa23.68■■□□□ 1.38
COPS7A-208ENST00000538410 HMGCS2P54868 508 aa23.67■■□□□ 1.38
COPS7A-208ENST00000538410 SH3D19Q5HYK7 790 aa23.67■■□□□ 1.38
COPS7A-208ENST00000538410 KIF28PB7ZC32 967 aa23.66■■□□□ 1.38
COPS7A-208ENST00000538410 PKN2Q16513 984 aaKnown RBP23.66■■□□□ 1.38
COPS7A-208ENST00000538410 CDC37Q16543 378 aaPredicted RBP23.66■■□□□ 1.38
COPS7A-208ENST00000538410 QRICH1Q2TAL8 776 aa23.66■■□□□ 1.38
COPS7A-208ENST00000538410 FOXD4L6Q3SYB3 417 aaPredicted RBP23.66■■□□□ 1.38
COPS7A-208ENST00000538410 TYW1BQ6NUM6 668 aa23.66■■□□□ 1.38
COPS7A-208ENST00000538410 FOXD4L3Q6VB84 417 aaPredicted RBP23.66■■□□□ 1.38
COPS7A-208ENST00000538410 DIS3L2Q8IYB7 885 aaKnown RBP23.66■■□□□ 1.38
COPS7A-208ENST00000538410 CCDC148Q8NFR7 591 aa23.66■■□□□ 1.38
COPS7A-208ENST00000538410 U2AF2P26368 475 aaKnown RBP eCLIP23.66■■□□□ 1.38
COPS7A-208ENST00000538410 NLRP5P59047 1200 aa23.66■■□□□ 1.38
COPS7A-208ENST00000538410 BRAPQ7Z569 592 aa23.66■■□□□ 1.38
COPS7A-208ENST00000538410 CCDC12Q8WUD4 166 aaPredicted RBP23.66■■□□□ 1.38
COPS7A-208ENST00000538410 CHAMP1Q96JM3 812 aa23.66■■□□□ 1.38
COPS7A-208ENST00000538410 RPAP3Q9H6T3 665 aaPredicted RBP23.66■■□□□ 1.38
COPS7A-208ENST00000538410 TMOD4Q9NZQ9 345 aa23.66■■□□□ 1.38
COPS7A-208ENST00000538410 SMCHD1A6NHR9 2005 aa23.65■■□□□ 1.38
COPS7A-208ENST00000538410 PPP1R11O60927 126 aaPredicted RBP23.65■■□□□ 1.38
COPS7A-208ENST00000538410 GNL2Q13823 731 aaKnown RBP23.65■■□□□ 1.38
COPS7A-208ENST00000538410 TAF1CQ15572 869 aaPredicted RBP23.65■■□□□ 1.38
COPS7A-208ENST00000538410 NPY5RQ15761 445 aa23.65■■□□□ 1.38
COPS7A-208ENST00000538410 FAM173BQ6P4H8 233 aa23.65■■□□□ 1.38
COPS7A-208ENST00000538410 FAM43AQ8N2R8 423 aa23.65■■□□□ 1.38
COPS7A-208ENST00000538410 KIFC2Q96AC6 838 aa23.65■■□□□ 1.38
COPS7A-208ENST00000538410 FOXP1Q9H334 677 aaPredicted RBP23.65■■□□□ 1.38
COPS7A-208ENST00000538410 FBXO28Q9NVF7 368 aa23.65■■□□□ 1.38
COPS7A-208ENST00000538410 COL11A1P12107 1806 aaPredicted RBP23.65■■□□□ 1.38
COPS7A-208ENST00000538410 BTBD18B2RXH4 712 aa23.64■■□□□ 1.38
COPS7A-208ENST00000538410 CXCL11O14625 94 aa23.64■■□□□ 1.38
COPS7A-208ENST00000538410 CALML3P27482 149 aa23.64■■□□□ 1.38
COPS7A-208ENST00000538410 KRT2P35908 639 aa23.64■■□□□ 1.38
COPS7A-208ENST00000538410 NAPAP54920 295 aa23.64■■□□□ 1.38
COPS7A-208ENST00000538410 COA7Q96BR5 231 aa23.64■■□□□ 1.38
COPS7A-208ENST00000538410 TANGO6Q9C0B7 1094 aa23.64■■□□□ 1.38
COPS7A-208ENST00000538410 ZFYVE28Q9HCC9 887 aa23.64■■□□□ 1.38
COPS7A-208ENST00000538410 BRMS1Q9HCU9 246 aa23.64■■□□□ 1.38
COPS7A-208ENST00000538410 PRPF38AQ8NAV1 312 aaKnown RBP23.63■■□□□ 1.37
COPS7A-208ENST00000538410 OXER1Q8TDS5 423 aa23.63■■□□□ 1.37
COPS7A-208ENST00000538410 SLF1Q9BQI6 1058 aa23.63■■□□□ 1.37
COPS7A-208ENST00000538410 RANBP17Q9H2T7 1088 aaKnown RBP23.63■■□□□ 1.37
COPS7A-208ENST00000538410 KCNH4Q9UQ05 1017 aa23.63■■□□□ 1.37
COPS7A-208ENST00000538410 BTBD19C9JJ37 291 aa23.62■■□□□ 1.37
COPS7A-208ENST00000538410 SNAP25P60880 206 aa23.62■■□□□ 1.37
COPS7A-208ENST00000538410 DNM1Q05193 864 aaKnown RBP23.62■■□□□ 1.37
COPS7A-208ENST00000538410 NFKBIBQ15653 356 aa23.62■■□□□ 1.37
COPS7A-208ENST00000538410 GALNT17Q6IS24 598 aa23.62■■□□□ 1.37
COPS7A-208ENST00000538410 PPP1R18Q6NYC8 613 aa23.62■■□□□ 1.37
COPS7A-208ENST00000538410 ZMYND12Q9H0C1 365 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms