RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 SCNN1DP51172 638 aa15.85■□□□□ 0.13
LIMK1-208ENST00000538333 ASPRV1Q53RT3 343 aa15.85■□□□□ 0.13
LIMK1-208ENST00000538333 ZNF658Q5TYW1 1059 aaPredicted RBP15.85■□□□□ 0.13
LIMK1-208ENST00000538333 ZNF713Q8N859 430 aaPredicted RBP15.85■□□□□ 0.13
LIMK1-208ENST00000538333 VAT1LQ9HCJ6 419 aa15.85■□□□□ 0.13
LIMK1-208ENST00000538333 CTNND2Q9UQB3 1225 aa15.85■□□□□ 0.13
LIMK1-208ENST00000538333 SCN9AQ15858 1988 aa15.84■□□□□ 0.13
LIMK1-208ENST00000538333 FRMPD2Q68DX3 1309 aaPredicted RBP15.84■□□□□ 0.13
LIMK1-208ENST00000538333 TEX33O43247 280 aa15.84■□□□□ 0.13
LIMK1-208ENST00000538333 SYCP1Q15431 976 aa15.84■□□□□ 0.13
LIMK1-208ENST00000538333 FCHSD1Q86WN1 690 aa15.84■□□□□ 0.13
LIMK1-208ENST00000538333 CLEC10AQ8IUN9 316 aa15.84■□□□□ 0.13
LIMK1-208ENST00000538333 LRRC47Q8N1G4 583 aaKnown RBP15.84■□□□□ 0.13
LIMK1-208ENST00000538333 FLAD1Q8NFF5 587 aa15.84■□□□□ 0.13
LIMK1-208ENST00000538333 KIF18AQ8NI77 898 aa15.84■□□□□ 0.13
LIMK1-208ENST00000538333 LRRC15Q8TF66 581 aa15.84■□□□□ 0.13
LIMK1-208ENST00000538333 ANKRD7Q92527 254 aa15.84■□□□□ 0.13
LIMK1-208ENST00000538333 RMND1Q9NWS8 449 aa15.84■□□□□ 0.13
LIMK1-208ENST00000538333 RWDD2AQ9UIY3 292 aa15.84■□□□□ 0.13
LIMK1-208ENST00000538333 ARHGAP6O43182 974 aa15.83■□□□□ 0.13
LIMK1-208ENST00000538333 RRAGBQ5VZM2 374 aa15.83■□□□□ 0.13
LIMK1-208ENST00000538333 NEK8Q86SG6 692 aa15.83■□□□□ 0.13
LIMK1-208ENST00000538333 TEKT1Q969V4 418 aa15.83■□□□□ 0.13
LIMK1-208ENST00000538333 KBTBD4Q9NVX7 518 aa15.83■□□□□ 0.13
LIMK1-208ENST00000538333 PARP3Q9Y6F1 533 aa15.83■□□□□ 0.13
LIMK1-208ENST00000538333 CCP110O43303 1012 aa15.83■□□□□ 0.12
LIMK1-208ENST00000538333 TTLL1O95922 423 aa15.83■□□□□ 0.12
LIMK1-208ENST00000538333 APBA3O96018 575 aa15.83■□□□□ 0.12
LIMK1-208ENST00000538333 OR52Z1P0C646 297 aa15.83■□□□□ 0.12
LIMK1-208ENST00000538333 UBA7P41226 1012 aa15.83■□□□□ 0.12
LIMK1-208ENST00000538333 LETM2Q2VYF4 491 aa15.83■□□□□ 0.12
LIMK1-208ENST00000538333 SOGA3Q5TF21 947 aa15.83■□□□□ 0.12
LIMK1-208ENST00000538333 AK8Q96MA6 479 aa15.83■□□□□ 0.12
LIMK1-208ENST00000538333 CTAGE1Q96RT6 745 aa15.83■□□□□ 0.12
LIMK1-208ENST00000538333 STX10O60499 249 aa15.82■□□□□ 0.12
LIMK1-208ENST00000538333 CCNT1O60563 726 aaKnown RBP15.82■□□□□ 0.12
LIMK1-208ENST00000538333 TUBB4AP04350 444 aa15.82■□□□□ 0.12
LIMK1-208ENST00000538333 MYL1P05976 194 aa15.82■□□□□ 0.12
LIMK1-208ENST00000538333 EIF6P56537 245 aaKnown RBP15.82■□□□□ 0.12
LIMK1-208ENST00000538333 NCBP1Q09161 790 aaKnown RBP15.82■□□□□ 0.12
LIMK1-208ENST00000538333 PAK1Q13153 545 aa15.82■□□□□ 0.12
LIMK1-208ENST00000538333 PODNQ7Z5L7 613 aa15.82■□□□□ 0.12
LIMK1-208ENST00000538333 REXO1L1PQ8IX06 675 aa15.82■□□□□ 0.12
LIMK1-208ENST00000538333 REXO1Q8N1G1 1221 aaKnown RBP15.82■□□□□ 0.12
LIMK1-208ENST00000538333 TBCKQ8TEA7 893 aa15.82■□□□□ 0.12
LIMK1-208ENST00000538333 BAG1Q99933 345 aaPredicted RBP15.82■□□□□ 0.12
LIMK1-208ENST00000538333 SLX4Q8IY92 1834 aa15.82■□□□□ 0.12
LIMK1-208ENST00000538333 LRRC10BA6NIK2 292 aa15.82■□□□□ 0.12
LIMK1-208ENST00000538333 KLRC4O43908 158 aa15.82■□□□□ 0.12
LIMK1-208ENST00000538333 ADKP55263 362 aaKnown RBP15.82■□□□□ 0.12
LIMK1-208ENST00000538333 ZNF543Q08ER8 600 aa15.82■□□□□ 0.12
LIMK1-208ENST00000538333 NFIAQ12857 509 aa15.82■□□□□ 0.12
LIMK1-208ENST00000538333 ORC2Q13416 577 aaPredicted RBP15.82■□□□□ 0.12
LIMK1-208ENST00000538333 KCNB1Q14721 858 aa15.82■□□□□ 0.12
LIMK1-208ENST00000538333 KCNQ5Q9NR82 932 aa15.82■□□□□ 0.12
LIMK1-208ENST00000538333 GDAQ9Y2T3 454 aa15.82■□□□□ 0.12
LIMK1-208ENST00000538333 EDIL3O43854 480 aa15.81■□□□□ 0.12
LIMK1-208ENST00000538333 PRCPP42785 496 aa15.81■□□□□ 0.12
LIMK1-208ENST00000538333 CRKP46108 304 aa15.81■□□□□ 0.12
LIMK1-208ENST00000538333 ZDHHC15Q96MV8 337 aa15.81■□□□□ 0.12
LIMK1-208ENST00000538333 EHD4Q9H223 541 aa15.81■□□□□ 0.12
LIMK1-208ENST00000538333 DBNDD1Q9H9R9 158 aa15.81■□□□□ 0.12
LIMK1-208ENST00000538333 BIN2Q9UBW5 565 aaPredicted RBP15.81■□□□□ 0.12
LIMK1-208ENST00000538333 COBLO75128 1261 aa15.8■□□□□ 0.12
LIMK1-208ENST00000538333 SEMA3FQ13275 785 aa15.8■□□□□ 0.12
LIMK1-208ENST00000538333 JAKMIP3Q5VZ66 844 aa15.8■□□□□ 0.12
LIMK1-208ENST00000538333 TRIM65Q6PJ69 517 aa15.8■□□□□ 0.12
LIMK1-208ENST00000538333 SYT10Q6XYQ8 523 aa15.8■□□□□ 0.12
LIMK1-208ENST00000538333 NELFBQ8WX92 580 aa15.8■□□□□ 0.12
LIMK1-208ENST00000538333 COA7Q96BR5 231 aa15.8■□□□□ 0.12
LIMK1-208ENST00000538333 CUEDC2Q9H467 287 aa15.8■□□□□ 0.12
LIMK1-208ENST00000538333 DNAJC18Q9H819 358 aa15.8■□□□□ 0.12
LIMK1-208ENST00000538333 TMEM260Q9NX78 707 aa15.8■□□□□ 0.12
LIMK1-208ENST00000538333 LIMA1Q9UHB6 759 aaKnown RBP15.8■□□□□ 0.12
LIMK1-208ENST00000538333 ETF1P62495 437 aaKnown RBP15.8■□□□□ 0.12
LIMK1-208ENST00000538333 KMT5BQ4FZB7 885 aa15.8■□□□□ 0.12
LIMK1-208ENST00000538333 MSL1Q68DK7 614 aa15.8■□□□□ 0.12
LIMK1-208ENST00000538333 CABP7Q86V35 215 aa15.8■□□□□ 0.12
LIMK1-208ENST00000538333 ZFPM1Q8IX07 1006 aa15.8■□□□□ 0.12
LIMK1-208ENST00000538333 ADSSL1Q8N142 457 aa15.8■□□□□ 0.12
LIMK1-208ENST00000538333 IGSF22Q8N9C0 903 aa15.8■□□□□ 0.12
LIMK1-208ENST00000538333 ZNF622Q969S3 477 aaKnown RBP eCLIP15.8■□□□□ 0.12
LIMK1-208ENST00000538333 MRIQ9BWK5 157 aa15.8■□□□□ 0.12
LIMK1-208ENST00000538333 TMX4Q9H1E5 349 aaPredicted RBP15.8■□□□□ 0.12
LIMK1-208ENST00000538333 L2HGDHQ9H9P8 463 aa15.8■□□□□ 0.12
LIMK1-208ENST00000538333 JMJD4Q9H9V9 463 aa15.8■□□□□ 0.12
LIMK1-208ENST00000538333 MAGEF1Q9HAY2 307 aa15.8■□□□□ 0.12
LIMK1-208ENST00000538333 TNS1Q9HBL0 1735 aaKnown RBP15.8■□□□□ 0.12
LIMK1-208ENST00000538333 G3V3G9 751 aa15.79■□□□□ 0.12
LIMK1-208ENST00000538333 RHOBTB3O94955 611 aa15.79■□□□□ 0.12
LIMK1-208ENST00000538333 HLA-DOAP06340 250 aa15.79■□□□□ 0.12
LIMK1-208ENST00000538333 PLCG1P19174 1290 aa15.79■□□□□ 0.12
LIMK1-208ENST00000538333 FKBP1AP62942 108 aaKnown RBP15.79■□□□□ 0.12
LIMK1-208ENST00000538333 KRT31Q15323 416 aa15.79■□□□□ 0.12
LIMK1-208ENST00000538333 DCAF8Q5TAQ9 597 aa15.79■□□□□ 0.12
LIMK1-208ENST00000538333 POTEDQ86YR6 584 aa15.79■□□□□ 0.12
LIMK1-208ENST00000538333 RASSF8Q8NHQ8 419 aa15.79■□□□□ 0.12
LIMK1-208ENST00000538333 MTMR9Q96QG7 549 aa15.79■□□□□ 0.12
LIMK1-208ENST00000538333 PANX2Q96RD6 677 aa15.79■□□□□ 0.12
LIMK1-208ENST00000538333 PLIN2Q99541 437 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms