RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 RTKN2Q8IZC4 609 aa10.5□□□□□ -0.73
DDB1-211ENST00000538280 GPC2Q8N158 579 aa10.5□□□□□ -0.73
DDB1-211ENST00000538280 STAG2Q8N3U4 1231 aa10.5□□□□□ -0.73
DDB1-211ENST00000538280 NEDD1Q8NHV4 660 aa10.5□□□□□ -0.73
DDB1-211ENST00000538280 CAPNS2Q96L46 248 aa10.5□□□□□ -0.73
DDB1-211ENST00000538280 PSMD1Q99460 953 aa10.5□□□□□ -0.73
DDB1-211ENST00000538280 TMEM47Q9BQJ4 181 aa10.5□□□□□ -0.73
DDB1-211ENST00000538280 LZTS2Q9BRK4 669 aa10.5□□□□□ -0.73
DDB1-211ENST00000538280 SPZ1Q9BXG8 430 aa10.5□□□□□ -0.73
DDB1-211ENST00000538280 GGA1Q9UJY5 639 aa10.5□□□□□ -0.73
DDB1-211ENST00000538280 A0A1B0GTH6 734 aa10.49□□□□□ -0.73
DDB1-211ENST00000538280 PPP1R3GB7ZBB8 358 aa10.49□□□□□ -0.73
DDB1-211ENST00000538280 STXBP3O00186 592 aa10.49□□□□□ -0.73
DDB1-211ENST00000538280 CCP110O43303 1012 aa10.49□□□□□ -0.73
DDB1-211ENST00000538280 CYTH3O43739 400 aa10.49□□□□□ -0.73
DDB1-211ENST00000538280 GTPBP6O43824 516 aaPredicted RBP10.49□□□□□ -0.73
DDB1-211ENST00000538280 UFL1O94874 794 aa10.49□□□□□ -0.73
DDB1-211ENST00000538280 TOP1P11387 765 aaKnown RBP10.49□□□□□ -0.73
DDB1-211ENST00000538280 CD44P16070 742 aaKnown RBP10.49□□□□□ -0.73
DDB1-211ENST00000538280 LONP1P36776 959 aaKnown RBP10.49□□□□□ -0.73
DDB1-211ENST00000538280 PBX1P40424 430 aa10.49□□□□□ -0.73
DDB1-211ENST00000538280 NR1I3Q14994 352 aa10.49□□□□□ -0.73
DDB1-211ENST00000538280 SPATA1Q5VX52 437 aa10.49□□□□□ -0.73
DDB1-211ENST00000538280 WWC2Q6AWC2 1192 aa10.49□□□□□ -0.73
DDB1-211ENST00000538280 PIK3AP1Q6ZUJ8 805 aa10.49□□□□□ -0.73
DDB1-211ENST00000538280 PDILTQ8N807 584 aa10.49□□□□□ -0.73
DDB1-211ENST00000538280 CCDC148Q8NFR7 591 aa10.49□□□□□ -0.73
DDB1-211ENST00000538280 TBC1D16Q8TBP0 767 aa10.49□□□□□ -0.73
DDB1-211ENST00000538280 TBC1D22AQ8WUA7 517 aa10.49□□□□□ -0.73
DDB1-211ENST00000538280 TGFBRAP1Q8WUH2 860 aa10.49□□□□□ -0.73
DDB1-211ENST00000538280 TSC1Q92574 1164 aa10.49□□□□□ -0.73
DDB1-211ENST00000538280 GPR101Q96P66 508 aaPredicted RBP10.49□□□□□ -0.73
DDB1-211ENST00000538280 L2HGDHQ9H9P8 463 aa10.49□□□□□ -0.73
DDB1-211ENST00000538280 ZNF287Q9HBT7 754 aa10.49□□□□□ -0.73
DDB1-211ENST00000538280 FLT1P17948 1338 aa10.49□□□□□ -0.73
DDB1-211ENST00000538280 SYNRGQ9UMZ2 1314 aa10.49□□□□□ -0.73
DDB1-211ENST00000538280 VWA3AA6NCI4 1184 aa10.48□□□□□ -0.73
DDB1-211ENST00000538280 USP17L3A6NCW0 530 aa10.48□□□□□ -0.73
DDB1-211ENST00000538280 USP17L4A6NCW7 530 aa10.48□□□□□ -0.73
DDB1-211ENST00000538280 TSPY3P0CV98 308 aa10.48□□□□□ -0.73
DDB1-211ENST00000538280 TSPY8P0CW00 308 aa10.48□□□□□ -0.73
DDB1-211ENST00000538280 PRPHP41219 470 aa10.48□□□□□ -0.73
DDB1-211ENST00000538280 CDK8P49336 464 aa10.48□□□□□ -0.73
DDB1-211ENST00000538280 NCBP1Q09161 790 aaKnown RBP10.48□□□□□ -0.73
DDB1-211ENST00000538280 SEMA3FQ13275 785 aa10.48□□□□□ -0.73
DDB1-211ENST00000538280 PAXIP1Q6ZW49 1069 aaPredicted RBP10.48□□□□□ -0.73
DDB1-211ENST00000538280 USP17L1Q7RTZ2 530 aa10.48□□□□□ -0.73
DDB1-211ENST00000538280 PNMA8AQ86V59 439 aaPredicted RBP10.48□□□□□ -0.73
DDB1-211ENST00000538280 MAPKAPK5Q8IW41 473 aa10.48□□□□□ -0.73
DDB1-211ENST00000538280 SLF2Q8IX21 1173 aa10.48□□□□□ -0.73
DDB1-211ENST00000538280 TRMT44Q8IYL2 757 aaKnown RBP10.48□□□□□ -0.73
DDB1-211ENST00000538280 ZNF444Q8N0Y2 327 aaPredicted RBP10.48□□□□□ -0.73
DDB1-211ENST00000538280 IQUBQ8NA54 791 aa10.48□□□□□ -0.73
DDB1-211ENST00000538280 SLC44A5Q8NCS7 719 aa10.48□□□□□ -0.73
DDB1-211ENST00000538280 MTRQ99707 1265 aa10.48□□□□□ -0.73
DDB1-211ENST00000538280 MKNK2Q9HBH9 465 aa10.48□□□□□ -0.73
DDB1-211ENST00000538280 SAMSN1Q9NSI8 373 aaKnown RBP10.48□□□□□ -0.73
DDB1-211ENST00000538280 BARHL2Q9NY43 387 aa10.48□□□□□ -0.73
DDB1-211ENST00000538280 PCDHA6Q9UN73 950 aa10.48□□□□□ -0.73
DDB1-211ENST00000538280 PCDHA8Q9Y5H6 950 aa10.48□□□□□ -0.73
DDB1-211ENST00000538280 IGKV6D-41A0A0C4DH26 115 aa10.47□□□□□ -0.73
DDB1-211ENST00000538280 SHTN1A0MZ66 631 aa10.47□□□□□ -0.73
DDB1-211ENST00000538280 LAD1O00515 517 aa10.47□□□□□ -0.73
DDB1-211ENST00000538280 ARHGAP6O43182 974 aa10.47□□□□□ -0.73
DDB1-211ENST00000538280 FECHP22830 423 aa10.47□□□□□ -0.73
DDB1-211ENST00000538280 AFMP43652 599 aa10.47□□□□□ -0.73
DDB1-211ENST00000538280 ORC2Q13416 577 aaPredicted RBP10.47□□□□□ -0.73
DDB1-211ENST00000538280 AOC3Q16853 763 aa10.47□□□□□ -0.73
DDB1-211ENST00000538280 DLK2Q6UY11 383 aa10.47□□□□□ -0.73
DDB1-211ENST00000538280 REXO1L1PQ8IX06 675 aa10.47□□□□□ -0.73
DDB1-211ENST00000538280 SP8Q8IXZ3 490 aa10.47□□□□□ -0.73
DDB1-211ENST00000538280 TEX11Q8IYF3 940 aa10.47□□□□□ -0.73
DDB1-211ENST00000538280 TC2NQ8N9U0 490 aa10.47□□□□□ -0.73
DDB1-211ENST00000538280 KIF18AQ8NI77 898 aa10.47□□□□□ -0.73
DDB1-211ENST00000538280 GPKOWQ92917 476 aaPredicted RBP eCLIP10.47□□□□□ -0.73
DDB1-211ENST00000538280 CCSER1Q9C0I3 900 aa10.47□□□□□ -0.73
DDB1-211ENST00000538280 ZMYND12Q9H0C1 365 aa10.47□□□□□ -0.73
DDB1-211ENST00000538280 TRMT1Q9NXH9 659 aaKnown RBP10.47□□□□□ -0.73
DDB1-211ENST00000538280 POLLQ9UGP5 575 aa10.47□□□□□ -0.73
DDB1-211ENST00000538280 SUGT1Q9Y2Z0 365 aa10.47□□□□□ -0.73
DDB1-211ENST00000538280 PHLPP2Q6ZVD8 1323 aa10.47□□□□□ -0.73
DDB1-211ENST00000538280 MYO3BQ8WXR4 1341 aa10.47□□□□□ -0.73
DDB1-211ENST00000538280 POLR2AP24928 1970 aaKnown RBP10.46□□□□□ -0.73
DDB1-211ENST00000538280 ESYT2A0FGR8 921 aa10.46□□□□□ -0.73
DDB1-211ENST00000538280 CCDC85CA6NKD9 419 aa10.46□□□□□ -0.73
DDB1-211ENST00000538280 hCG_1984214I3L0E3 225 aa10.46□□□□□ -0.73
DDB1-211ENST00000538280 PPEF1O14829 653 aaPredicted RBP10.46□□□□□ -0.73
DDB1-211ENST00000538280 STX10O60499 249 aa10.46□□□□□ -0.73
DDB1-211ENST00000538280 CASP1P29466 404 aa10.46□□□□□ -0.73
DDB1-211ENST00000538280 ALDH1B1P30837 517 aa10.46□□□□□ -0.73
DDB1-211ENST00000538280 MCM7P33993 719 aa10.46□□□□□ -0.73
DDB1-211ENST00000538280 EIF6P56537 245 aaKnown RBP10.46□□□□□ -0.73
DDB1-211ENST00000538280 MAP2K1Q02750 393 aaPredicted RBP10.46□□□□□ -0.73
DDB1-211ENST00000538280 GABPAQ06546 454 aa10.46□□□□□ -0.73
DDB1-211ENST00000538280 SPECC1LQ69YQ0 1117 aa10.46□□□□□ -0.73
DDB1-211ENST00000538280 TRIM65Q6PJ69 517 aa10.46□□□□□ -0.73
DDB1-211ENST00000538280 LARGE2Q8N3Y3 721 aa10.46□□□□□ -0.73
DDB1-211ENST00000538280 ZNF713Q8N859 430 aaPredicted RBP10.46□□□□□ -0.73
DDB1-211ENST00000538280 JDP2Q8WYK2 163 aa10.46□□□□□ -0.73
DDB1-211ENST00000538280 ERO1AQ96HE7 468 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms