RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 IWS1Q96ST2 819 aa4.11□□□□□ -1.75
PTPN22-211ENST00000538253 ECM29Q5VYK3 1845 aa4.11□□□□□ -1.75
PTPN22-211ENST00000538253 TRPM7Q96QT4 1865 aa4.11□□□□□ -1.75
PTPN22-211ENST00000538253 PNMA6FA0A0J9YX94 578 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 SLC26A4O43511 780 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 PRKAB2O43741 272 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 CABYRO75952 493 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 DEXIO95424 95 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 ZNF543Q08ER8 600 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 NECTIN1Q15223 517 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 RUFY3Q7L099 469 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 ZNF654Q8IZM8 581 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 ANKLE1Q8NAG6 615 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 ARRDC4Q8NCT1 418 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 IL17RAQ96F46 866 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 EDC3Q96F86 508 aaKnown RBP4.1□□□□□ -1.75
PTPN22-211ENST00000538253 IPO9Q96P70 1041 aaKnown RBP4.1□□□□□ -1.75
PTPN22-211ENST00000538253 APBA2Q99767 749 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 RNF26Q9BY78 433 aaPredicted RBP4.1□□□□□ -1.75
PTPN22-211ENST00000538253 ASCC2Q9H1I8 757 aaPredicted RBP4.1□□□□□ -1.75
PTPN22-211ENST00000538253 EPB41L4AQ9HCS5 686 aaPredicted RBP4.1□□□□□ -1.75
PTPN22-211ENST00000538253 RNF186Q9NXI6 227 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 BIN2Q9UBW5 565 aaPredicted RBP4.1□□□□□ -1.75
PTPN22-211ENST00000538253 STK36Q9NRP7 1315 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 COL4A5P29400 1685 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 ESYT2A0FGR8 921 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 SPDYE3A6NKU9 549 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 TMEM232C9JQI7 657 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 GCOM1H8Y6P7 765 aaPredicted RBP4.1□□□□□ -1.75
PTPN22-211ENST00000538253 NDUFB10O96000 172 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 ICAM1P05362 532 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 TPM2P07951 284 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 POLR2MP0CAP2 368 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 HSPA1AP0DMV8 641 aaKnown RBP4.1□□□□□ -1.75
PTPN22-211ENST00000538253 HSPA1BP0DMV9 641 aaKnown RBP4.1□□□□□ -1.75
PTPN22-211ENST00000538253 VCAM1P19320 739 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 CLCN1P35523 988 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 ANP32AP39687 249 aaKnown RBP4.1□□□□□ -1.75
PTPN22-211ENST00000538253 NOVP48745 357 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 GRIK5Q16478 980 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 ODR4Q5SWX8 454 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 WDR78Q5VTH9 848 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 TAF3Q5VWG9 929 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 MAMSTRQ6ZN01 415 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 CCDC129Q6ZRS4 1044 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 CEP95Q96GE4 821 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 MMP19Q99542 508 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 HTATIP2Q9BUP3 242 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 RAB34Q9BZG1 259 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 CCPG1Q9ULG6 757 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 LIMCH1Q9UPQ0 1083 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 DOCK2Q92608 1830 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 B4E1Z4 1266 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 BTBD19C9JJ37 291 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 SH2B2O14492 632 aaPredicted RBP4.1□□□□□ -1.75
PTPN22-211ENST00000538253 BAG4O95429 457 aaKnown RBP4.1□□□□□ -1.75
PTPN22-211ENST00000538253 GCFC2P16383 781 aaKnown RBP4.1□□□□□ -1.75
PTPN22-211ENST00000538253 PLCD1P51178 756 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 ERVK-9P63128 1117 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 ERVK-24P63145 666 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 TSHZ3Q63HK5 1081 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 OLFML2BQ68BL8 750 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 SH3BP5LQ7L8J4 393 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 KRT25Q7Z3Z0 450 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 ANKRD35Q8N283 1001 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 SMARCC2Q8TAQ2 1214 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 BRI3BPQ8WY22 251 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 ZKSCAN4Q969J2 545 aaPredicted RBP4.1□□□□□ -1.75
PTPN22-211ENST00000538253 TMEM47Q9BQJ4 181 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 PYM1Q9BRP8 204 aaKnown RBP4.1□□□□□ -1.75
PTPN22-211ENST00000538253 USP26Q9BXU7 913 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 AP5M1Q9H0R1 490 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 ZSWIM6Q9HCJ5 1215 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 VTA1Q9NP79 307 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 CEP131Q9UPN4 1083 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 MYH2Q9UKX2 1941 aa4.1□□□□□ -1.75
PTPN22-211ENST00000538253 CARNS1A5YM72 827 aa4.09□□□□□ -1.75
PTPN22-211ENST00000538253 ZBTB5O15062 677 aa4.09□□□□□ -1.75
PTPN22-211ENST00000538253 MARCH6O60337 910 aa4.09□□□□□ -1.75
PTPN22-211ENST00000538253 HMGCRP04035 888 aa4.09□□□□□ -1.75
PTPN22-211ENST00000538253 ZSCAN20P17040 1043 aaPredicted RBP4.09□□□□□ -1.75
PTPN22-211ENST00000538253 CASTP20810 708 aaKnown RBP4.09□□□□□ -1.75
PTPN22-211ENST00000538253 HAND2P61296 217 aa4.09□□□□□ -1.75
PTPN22-211ENST00000538253 CTDSPL2Q05D32 466 aa4.09□□□□□ -1.75
PTPN22-211ENST00000538253 MAP2K5Q13163 448 aa4.09□□□□□ -1.75
PTPN22-211ENST00000538253 PLS1Q14651 629 aa4.09□□□□□ -1.75
PTPN22-211ENST00000538253 ADGRA1Q86SQ6 560 aa4.09□□□□□ -1.75
PTPN22-211ENST00000538253 NCAPG2Q86XI2 1143 aa4.09□□□□□ -1.75
PTPN22-211ENST00000538253 MB21D2Q8IYB1 491 aaPredicted RBP4.09□□□□□ -1.75
PTPN22-211ENST00000538253 CCDC155Q8N6L0 562 aa4.09□□□□□ -1.75
PTPN22-211ENST00000538253 SPATC1LQ9H0A9 340 aa4.09□□□□□ -1.75
PTPN22-211ENST00000538253 SRRDQ9UH36 339 aa4.09□□□□□ -1.75
PTPN22-211ENST00000538253 Q9Y3F1 56 aa4.09□□□□□ -1.75
PTPN22-211ENST00000538253 PPME1Q9Y570 386 aa4.09□□□□□ -1.75
PTPN22-211ENST00000538253 PHLPP2Q6ZVD8 1323 aa4.09□□□□□ -1.75
PTPN22-211ENST00000538253 SYNGAP1Q96PV0 1343 aa4.09□□□□□ -1.75
PTPN22-211ENST00000538253 KLF18A0A0U1RQI7 1052 aa4.09□□□□□ -1.75
PTPN22-211ENST00000538253 SHTN1A0MZ66 631 aa4.09□□□□□ -1.75
PTPN22-211ENST00000538253 KLRF2D3W0D1 207 aa4.09□□□□□ -1.75
PTPN22-211ENST00000538253 TRPA1O75762 1119 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms