RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 WASF1Q92558 559 aa8.24□□□□□ -1.09
MSH6-209ENST00000538136 AP5M1Q9H0R1 490 aa8.24□□□□□ -1.09
MSH6-209ENST00000538136 C10orf71Q711Q0 1435 aa8.24□□□□□ -1.09
MSH6-209ENST00000538136 GNA11P29992 359 aa8.24□□□□□ -1.09
MSH6-209ENST00000538136 PPP4CP60510 307 aa8.24□□□□□ -1.09
MSH6-209ENST00000538136 DNM1Q05193 864 aaKnown RBP8.24□□□□□ -1.09
MSH6-209ENST00000538136 ARHGEF6Q15052 776 aa8.24□□□□□ -1.09
MSH6-209ENST00000538136 SPOUT1Q5T280 376 aaKnown RBP8.24□□□□□ -1.09
MSH6-209ENST00000538136 SPRYD7Q5W111 196 aa8.24□□□□□ -1.09
MSH6-209ENST00000538136 FAM83AQ86UY5 434 aa8.24□□□□□ -1.09
MSH6-209ENST00000538136 FBXO16Q8IX29 292 aaPredicted RBP8.24□□□□□ -1.09
MSH6-209ENST00000538136 ZC3H15Q8WU90 426 aaKnown RBP8.24□□□□□ -1.09
MSH6-209ENST00000538136 ZSCAN31Q96LW9 406 aaPredicted RBP8.24□□□□□ -1.09
MSH6-209ENST00000538136 TBC1D32Q96NH3 1257 aa8.24□□□□□ -1.09
MSH6-209ENST00000538136 GBP4Q96PP9 640 aa8.24□□□□□ -1.09
MSH6-209ENST00000538136 MPHOSPH6Q99547 160 aaKnown RBP8.24□□□□□ -1.09
MSH6-209ENST00000538136 NUDT12Q9BQG2 462 aa8.24□□□□□ -1.09
MSH6-209ENST00000538136 SLC5A4Q9NY91 659 aa8.24□□□□□ -1.09
MSH6-209ENST00000538136 RBM25P49756 843 aaKnown RBP8.24□□□□□ -1.09
MSH6-209ENST00000538136 HDLBPQ00341 1268 aaKnown RBP8.24□□□□□ -1.09
MSH6-209ENST00000538136 BRDTQ58F21 947 aaPredicted RBP8.24□□□□□ -1.09
MSH6-209ENST00000538136 PLCD3Q8N3E9 789 aa8.24□□□□□ -1.09
MSH6-209ENST00000538136 TEX13BQ9BXU2 312 aa8.24□□□□□ -1.09
MSH6-209ENST00000538136 TXLNAP40222 546 aa8.24□□□□□ -1.09
MSH6-209ENST00000538136 NECTIN1Q15223 517 aa8.24□□□□□ -1.09
MSH6-209ENST00000538136 RCSD1Q6JBY9 416 aa8.24□□□□□ -1.09
MSH6-209ENST00000538136 PLA2G4DQ86XP0 818 aa8.24□□□□□ -1.09
MSH6-209ENST00000538136 NKX2-3Q8TAU0 364 aa8.24□□□□□ -1.09
MSH6-209ENST00000538136 RBM46Q8TBY0 533 aaKnown RBP8.24□□□□□ -1.09
MSH6-209ENST00000538136 OSBPL3Q9H4L5 887 aa8.24□□□□□ -1.09
MSH6-209ENST00000538136 AZI2Q9H6S1 392 aa8.24□□□□□ -1.09
MSH6-209ENST00000538136 MTUS1Q9ULD2 1270 aa8.24□□□□□ -1.09
MSH6-209ENST00000538136 MRPL11Q9Y3B7 192 aaKnown RBP8.24□□□□□ -1.09
MSH6-209ENST00000538136 COL18A1P39060 1754 aa8.23□□□□□ -1.09
MSH6-209ENST00000538136 TCRBV5S4A2TA0A5A2 114 aa8.23□□□□□ -1.09
MSH6-209ENST00000538136 TECP42680 631 aa8.23□□□□□ -1.09
MSH6-209ENST00000538136 BEX3Q00994 111 aa8.23□□□□□ -1.09
MSH6-209ENST00000538136 SKIV2LQ15477 1246 aaKnown RBP8.23□□□□□ -1.09
MSH6-209ENST00000538136 C16orf86Q6ZW13 317 aa8.23□□□□□ -1.09
MSH6-209ENST00000538136 BICD1Q96G01 975 aa8.23□□□□□ -1.09
MSH6-209ENST00000538136 GMLQ99445 158 aa8.23□□□□□ -1.09
MSH6-209ENST00000538136 PPP1R12CQ9BZL4 782 aa8.23□□□□□ -1.09
MSH6-209ENST00000538136 ATP11BQ9Y2G3 1177 aa8.23□□□□□ -1.09
MSH6-209ENST00000538136 FAM205CA6NFA0 338 aa8.23□□□□□ -1.09
MSH6-209ENST00000538136 STX6O43752 255 aa8.23□□□□□ -1.09
MSH6-209ENST00000538136 BAG4O95429 457 aaKnown RBP8.23□□□□□ -1.09
MSH6-209ENST00000538136 HOXD10P28358 340 aa8.23□□□□□ -1.09
MSH6-209ENST00000538136 RPS6P62753 249 aaKnown RBP8.23□□□□□ -1.09
MSH6-209ENST00000538136 CCDC178Q5BJE1 867 aa8.23□□□□□ -1.09
MSH6-209ENST00000538136 GPATCH4Q5T3I0 446 aaKnown RBP8.23□□□□□ -1.09
MSH6-209ENST00000538136 MICALL1Q8N3F8 863 aa8.23□□□□□ -1.09
MSH6-209ENST00000538136 SRBD1Q8N5C6 995 aaKnown RBP8.23□□□□□ -1.09
MSH6-209ENST00000538136 CCDC148Q8NFR7 591 aa8.23□□□□□ -1.09
MSH6-209ENST00000538136 NBPF3Q9H094 633 aa8.23□□□□□ -1.09
MSH6-209ENST00000538136 DNAJC18Q9H819 358 aa8.23□□□□□ -1.09
MSH6-209ENST00000538136 CCDC169A6NNP5 214 aa8.23□□□□□ -1.09
MSH6-209ENST00000538136 PQBP1O60828 265 aaKnown RBP8.23□□□□□ -1.09
MSH6-209ENST00000538136 GAS7O60861 476 aa8.23□□□□□ -1.09
MSH6-209ENST00000538136 CSDE1O75534 798 aaKnown RBP8.23□□□□□ -1.09
MSH6-209ENST00000538136 PTMAP06454 111 aaKnown RBP8.23□□□□□ -1.09
MSH6-209ENST00000538136 PDHBP11177 359 aa8.23□□□□□ -1.09
MSH6-209ENST00000538136 SCG2P13521 617 aa8.23□□□□□ -1.09
MSH6-209ENST00000538136 DPH6Q7L8W6 267 aa8.23□□□□□ -1.09
MSH6-209ENST00000538136 DYMQ7RTS9 669 aa8.23□□□□□ -1.09
MSH6-209ENST00000538136 IL17RBQ9NRM6 502 aa8.23□□□□□ -1.09
MSH6-209ENST00000538136 MANSC4A6NHS7 340 aaPredicted RBP8.22□□□□□ -1.09
MSH6-209ENST00000538136 TXNP10599 105 aaKnown RBP8.22□□□□□ -1.09
MSH6-209ENST00000538136 OXER1Q8TDS5 423 aa8.22□□□□□ -1.09
MSH6-209ENST00000538136 DHX58Q96C10 678 aa8.22□□□□□ -1.09
MSH6-209ENST00000538136 R3HDMLQ9H3Y0 253 aa8.22□□□□□ -1.09
MSH6-209ENST00000538136 TCP11L1Q9NUJ3 509 aa8.22□□□□□ -1.09
MSH6-209ENST00000538136 RIPK3Q9Y572 518 aa8.22□□□□□ -1.09
MSH6-209ENST00000538136 ATP6V1DQ9Y5K8 247 aa8.22□□□□□ -1.09
MSH6-209ENST00000538136 DLG5Q8TDM6 1919 aa8.22□□□□□ -1.09
MSH6-209ENST00000538136 GVINP1Q7Z2Y8 2422 aa8.22□□□□□ -1.09
MSH6-209ENST00000538136 IGF2BP3O00425 579 aaKnown RBP eCLIP8.22□□□□□ -1.09
MSH6-209ENST00000538136 SH2B2O14492 632 aaPredicted RBP8.22□□□□□ -1.09
MSH6-209ENST00000538136 KRT2P35908 639 aa8.22□□□□□ -1.09
MSH6-209ENST00000538136 TBCKQ8TEA7 893 aa8.22□□□□□ -1.09
MSH6-209ENST00000538136 SENP6Q9GZR1 1112 aaPredicted RBP8.22□□□□□ -1.09
MSH6-209ENST00000538136 SNCAIPQ9Y6H5 919 aa8.22□□□□□ -1.09
MSH6-209ENST00000538136 POTECB2RU33 542 aa8.22□□□□□ -1.09
MSH6-209ENST00000538136 SYN1P17600 705 aa8.22□□□□□ -1.09
MSH6-209ENST00000538136 ADORA2AP29274 412 aa8.22□□□□□ -1.09
MSH6-209ENST00000538136 FCGRTP55899 365 aa8.22□□□□□ -1.09
MSH6-209ENST00000538136 MAP2K1Q02750 393 aaPredicted RBP8.22□□□□□ -1.09
MSH6-209ENST00000538136 ANP32BQ92688 251 aaKnown RBP8.22□□□□□ -1.09
MSH6-209ENST00000538136 TAAR1Q96RJ0 339 aa8.22□□□□□ -1.09
MSH6-209ENST00000538136 IDI2Q9BXS1 227 aa8.22□□□□□ -1.09
MSH6-209ENST00000538136 EHMT1Q9H9B1 1298 aa8.22□□□□□ -1.09
MSH6-209ENST00000538136 EMILIN3Q9NT22 766 aa8.22□□□□□ -1.09
MSH6-209ENST00000538136 ADCY3O60266 1144 aa8.21□□□□□ -1.09
MSH6-209ENST00000538136 COBLO75128 1261 aa8.21□□□□□ -1.09
MSH6-209ENST00000538136 SYT1P21579 422 aa8.21□□□□□ -1.09
MSH6-209ENST00000538136 ANTXR2P58335 489 aa8.21□□□□□ -1.09
MSH6-209ENST00000538136 HMGN5P82970 282 aaKnown RBP8.21□□□□□ -1.09
MSH6-209ENST00000538136 TMEM266Q2M3C6 531 aa8.21□□□□□ -1.09
MSH6-209ENST00000538136 CAVIN1Q6NZI2 390 aaKnown RBP8.21□□□□□ -1.09
MSH6-209ENST00000538136 CYFIP1Q7L576 1253 aa8.21□□□□□ -1.09
MSH6-209ENST00000538136 RDH13Q8NBN7 331 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms