RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 A6NHS1 94 aa11.87□□□□□ -0.51
RTN3-208ENST00000537981 HIP1O00291 1037 aa11.87□□□□□ -0.51
RTN3-208ENST00000537981 RNF8O76064 485 aa11.87□□□□□ -0.51
RTN3-208ENST00000537981 MAGEA10P43363 369 aaPredicted RBP11.87□□□□□ -0.51
RTN3-208ENST00000537981 KCNJ2P63252 427 aa11.87□□□□□ -0.51
RTN3-208ENST00000537981 DRP2Q13474 957 aa11.87□□□□□ -0.51
RTN3-208ENST00000537981 HLFQ16534 295 aa11.87□□□□□ -0.51
RTN3-208ENST00000537981 HHATQ5VTY9 493 aa11.87□□□□□ -0.51
RTN3-208ENST00000537981 NFRKBQ6P4R8 1299 aa11.87□□□□□ -0.51
RTN3-208ENST00000537981 CYP26C1Q6V0L0 522 aa11.87□□□□□ -0.51
RTN3-208ENST00000537981 SPATA21Q7Z572 469 aa11.87□□□□□ -0.51
RTN3-208ENST00000537981 VPS37DQ86XT2 251 aa11.87□□□□□ -0.51
RTN3-208ENST00000537981 TMTC1Q8IUR5 882 aa11.87□□□□□ -0.51
RTN3-208ENST00000537981 CNGA4Q8IV77 575 aa11.87□□□□□ -0.51
RTN3-208ENST00000537981 IFT81Q8WYA0 676 aa11.87□□□□□ -0.51
RTN3-208ENST00000537981 AGXT2Q9BYV1 514 aa11.87□□□□□ -0.51
RTN3-208ENST00000537981 TAB2Q9NYJ8 693 aa11.87□□□□□ -0.51
RTN3-208ENST00000537981 CHPF2Q9P2E5 772 aa11.87□□□□□ -0.51
RTN3-208ENST00000537981 AGAP1Q9UPQ3 857 aa11.87□□□□□ -0.51
RTN3-208ENST00000537981 PPIP5K2O43314 1243 aa11.87□□□□□ -0.51
RTN3-208ENST00000537981 NCK2O43639 380 aa11.87□□□□□ -0.51
RTN3-208ENST00000537981 PAX3P23760 479 aa11.87□□□□□ -0.51
RTN3-208ENST00000537981 SARSP49591 514 aaKnown RBP11.87□□□□□ -0.51
RTN3-208ENST00000537981 HAND2P61296 217 aa11.87□□□□□ -0.51
RTN3-208ENST00000537981 CCDC47Q96A33 483 aaKnown RBP11.87□□□□□ -0.51
RTN3-208ENST00000537981 KAZALD1Q96I82 304 aa11.87□□□□□ -0.51
RTN3-208ENST00000537981 DENND2AQ9ULE3 1009 aa11.87□□□□□ -0.51
RTN3-208ENST00000537981 CACNA1FO60840 1977 aa11.86□□□□□ -0.51
RTN3-208ENST00000537981 AHCYL1O43865 530 aa11.86□□□□□ -0.51
RTN3-208ENST00000537981 PLCD1P51178 756 aa11.86□□□□□ -0.51
RTN3-208ENST00000537981 EPHB4P54760 987 aa11.86□□□□□ -0.51
RTN3-208ENST00000537981 BLMHQ13867 455 aa11.86□□□□□ -0.51
RTN3-208ENST00000537981 FILIP1LQ4L180 1135 aa11.86□□□□□ -0.51
RTN3-208ENST00000537981 WDR59Q6PJI9 974 aa11.86□□□□□ -0.51
RTN3-208ENST00000537981 UBE3BQ7Z3V4 1068 aa11.86□□□□□ -0.51
RTN3-208ENST00000537981 PROCA1Q8NCQ7 364 aaPredicted RBP11.86□□□□□ -0.51
RTN3-208ENST00000537981 SPATA4Q8NEY3 305 aa11.86□□□□□ -0.51
RTN3-208ENST00000537981 MORC4Q8TE76 937 aa11.86□□□□□ -0.51
RTN3-208ENST00000537981 STAMQ92783 540 aa11.86□□□□□ -0.51
RTN3-208ENST00000537981 MS4A14Q96JA4 679 aa11.86□□□□□ -0.51
RTN3-208ENST00000537981 OSBPL1AQ9BXW6 950 aa11.86□□□□□ -0.51
RTN3-208ENST00000537981 NDST4Q9H3R1 872 aa11.86□□□□□ -0.51
RTN3-208ENST00000537981 CAPN6Q9Y6Q1 641 aa11.86□□□□□ -0.51
RTN3-208ENST00000537981 PEAK1Q9H792 1746 aa11.86□□□□□ -0.51
RTN3-208ENST00000537981 PLEKHG1Q9ULL1 1385 aa11.86□□□□□ -0.51
RTN3-208ENST00000537981 GMNCA6NCL1 334 aa11.86□□□□□ -0.51
RTN3-208ENST00000537981 F8W031 263 aaPredicted RBP11.86□□□□□ -0.51
RTN3-208ENST00000537981 ZNF16P17020 682 aaPredicted RBP11.86□□□□□ -0.51
RTN3-208ENST00000537981 KCNA6P17658 529 aa11.86□□□□□ -0.51
RTN3-208ENST00000537981 AFMP43652 599 aa11.86□□□□□ -0.51
RTN3-208ENST00000537981 KRT31Q15323 416 aa11.86□□□□□ -0.51
RTN3-208ENST00000537981 TTC39AQ5SRH9 613 aa11.86□□□□□ -0.51
RTN3-208ENST00000537981 CFAP58Q5T655 872 aa11.86□□□□□ -0.51
RTN3-208ENST00000537981 CDKAL1Q5VV42 579 aa11.86□□□□□ -0.51
RTN3-208ENST00000537981 ALS2CLQ60I27 953 aa11.86□□□□□ -0.51
RTN3-208ENST00000537981 TRIM68Q6AZZ1 485 aa11.86□□□□□ -0.51
RTN3-208ENST00000537981 ATP6V1G3Q96LB4 118 aa11.86□□□□□ -0.51
RTN3-208ENST00000537981 C8orf37Q96NL8 207 aa11.86□□□□□ -0.51
RTN3-208ENST00000537981 RBM12Q9NTZ6 932 aaKnown RBP11.86□□□□□ -0.51
RTN3-208ENST00000537981 PNMA2Q9UL42 364 aa11.86□□□□□ -0.51
RTN3-208ENST00000537981 MYH2Q9UKX2 1941 aa11.86□□□□□ -0.51
RTN3-208ENST00000537981 SYNRGQ9UMZ2 1314 aa11.86□□□□□ -0.51
RTN3-208ENST00000537981 METP08581 1390 aa11.86□□□□□ -0.51
RTN3-208ENST00000537981 PTPRUQ92729 1446 aa11.86□□□□□ -0.51
RTN3-208ENST00000537981 PXDNLA1KZ92 1463 aa11.85□□□□□ -0.51
RTN3-208ENST00000537981 MYO5AQ9Y4I1 1855 aaKnown RBP11.85□□□□□ -0.51
RTN3-208ENST00000537981 TTC26A0AVF1 554 aa11.85□□□□□ -0.51
RTN3-208ENST00000537981 TRAPPC3O43617 180 aa11.85□□□□□ -0.51
RTN3-208ENST00000537981 SMIM24O75264 130 aa11.85□□□□□ -0.51
RTN3-208ENST00000537981 FAM133BQ5BKY9 247 aaKnown RBP11.85□□□□□ -0.51
RTN3-208ENST00000537981 DPH6Q7L8W6 267 aa11.85□□□□□ -0.51
RTN3-208ENST00000537981 KRT26Q7Z3Y9 468 aa11.85□□□□□ -0.51
RTN3-208ENST00000537981 NCAPG2Q86XI2 1143 aa11.85□□□□□ -0.51
RTN3-208ENST00000537981 EHBP1Q8NDI1 1231 aa11.85□□□□□ -0.51
RTN3-208ENST00000537981 RAPGEF5Q92565 580 aa11.85□□□□□ -0.51
RTN3-208ENST00000537981 PHKBQ93100 1093 aa11.85□□□□□ -0.51
RTN3-208ENST00000537981 TSC22D3Q99576 134 aa11.85□□□□□ -0.51
RTN3-208ENST00000537981 UBE2OQ9C0C9 1292 aaKnown RBP11.85□□□□□ -0.51
RTN3-208ENST00000537981 PCMTD2Q9NV79 361 aa11.85□□□□□ -0.51
RTN3-208ENST00000537981 STIM2Q9P246 746 aa11.85□□□□□ -0.51
RTN3-208ENST00000537981 SLC12A6Q9UHW9 1150 aa11.85□□□□□ -0.51
RTN3-208ENST00000537981 U3KPZ7 1027 aaPredicted RBP11.85□□□□□ -0.51
RTN3-208ENST00000537981 A0A087X0B3 334 aa11.85□□□□□ -0.51
RTN3-208ENST00000537981 GOLGA8BA8MQT2 603 aa11.85□□□□□ -0.51
RTN3-208ENST00000537981 B4DLN1 442 aa11.85□□□□□ -0.51
RTN3-208ENST00000537981 DNAJC8O75937 253 aaPredicted RBP11.85□□□□□ -0.51
RTN3-208ENST00000537981 NEFHP12036 1026 aa11.85□□□□□ -0.51
RTN3-208ENST00000537981 CUL4BQ13620 913 aa11.85□□□□□ -0.51
RTN3-208ENST00000537981 LACTB2Q53H82 288 aaPredicted RBP11.85□□□□□ -0.51
RTN3-208ENST00000537981 ADAMTS13Q76LX8 1427 aa11.85□□□□□ -0.51
RTN3-208ENST00000537981 BRAPQ7Z569 592 aa11.85□□□□□ -0.51
RTN3-208ENST00000537981 PHC3Q8NDX5 983 aa11.85□□□□□ -0.51
RTN3-208ENST00000537981 MDM1Q8TC05 714 aa11.85□□□□□ -0.51
RTN3-208ENST00000537981 MTFR1LQ9H019 292 aa11.85□□□□□ -0.51
RTN3-208ENST00000537981 MLXIPQ9HAP2 919 aa11.85□□□□□ -0.51
RTN3-208ENST00000537981 ECM29Q5VYK3 1845 aa11.84□□□□□ -0.51
RTN3-208ENST00000537981 NRKQ7Z2Y5 1582 aa11.84□□□□□ -0.51
RTN3-208ENST00000537981 KLF18A0A0U1RQI7 1052 aa11.84□□□□□ -0.51
RTN3-208ENST00000537981 ZSCAN9O15535 394 aaPredicted RBP11.84□□□□□ -0.51
RTN3-208ENST00000537981 EVI5O60447 810 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms