RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 ARL8AQ96BM9 186 aa12.68□□□□□ -0.38
SEMA4D-221ENST00000537934 CCDC114Q96M63 670 aa12.68□□□□□ -0.38
SEMA4D-221ENST00000537934 MED15Q96RN5 788 aa12.68□□□□□ -0.38
SEMA4D-221ENST00000537934 HAUS7Q99871 368 aa12.68□□□□□ -0.38
SEMA4D-221ENST00000537934 KCNH3Q9ULD8 1083 aa12.68□□□□□ -0.38
SEMA4D-221ENST00000537934 ZMYM6O95789 1325 aa12.68□□□□□ -0.38
SEMA4D-221ENST00000537934 ERCC5P28715 1186 aaPredicted RBP12.68□□□□□ -0.38
SEMA4D-221ENST00000537934 IGHMBP2P38935 993 aaKnown RBP12.68□□□□□ -0.38
SEMA4D-221ENST00000537934 IFFO1Q0D2I5 559 aa12.68□□□□□ -0.38
SEMA4D-221ENST00000537934 MORC3Q14149 939 aa12.68□□□□□ -0.38
SEMA4D-221ENST00000537934 CCDC26Q8TAB7 109 aa12.68□□□□□ -0.38
SEMA4D-221ENST00000537934 CELF1Q92879 486 aaKnown RBP12.68□□□□□ -0.38
SEMA4D-221ENST00000537934 HDAC6Q9UBN7 1215 aa12.68□□□□□ -0.38
SEMA4D-221ENST00000537934 ADD3Q9UEY8 706 aaKnown RBP12.68□□□□□ -0.38
SEMA4D-221ENST00000537934 TPX2Q9ULW0 747 aaKnown RBP12.68□□□□□ -0.38
SEMA4D-221ENST00000537934 TNRC6CQ9HCJ0 1690 aaKnown RBP12.68□□□□□ -0.38
SEMA4D-221ENST00000537934 ITIH6Q6UXX5 1313 aa12.68□□□□□ -0.38
SEMA4D-221ENST00000537934 SRRM3A6NNA2 597 aaPredicted RBP12.68□□□□□ -0.38
SEMA4D-221ENST00000537934 GYPCP04921 128 aa12.68□□□□□ -0.38
SEMA4D-221ENST00000537934 SARSP49591 514 aaKnown RBP12.68□□□□□ -0.38
SEMA4D-221ENST00000537934 RWDD2BP57060 319 aa12.68□□□□□ -0.38
SEMA4D-221ENST00000537934 IFT88Q13099 833 aa12.68□□□□□ -0.38
SEMA4D-221ENST00000537934 SCARF1Q14162 830 aa12.68□□□□□ -0.38
SEMA4D-221ENST00000537934 PTPAQ15257 358 aa12.68□□□□□ -0.38
SEMA4D-221ENST00000537934 SLC9C2Q5TAH2 1124 aa12.68□□□□□ -0.38
SEMA4D-221ENST00000537934 CCDC70Q6NSX1 233 aa12.68□□□□□ -0.38
SEMA4D-221ENST00000537934 FBXL16Q8N461 479 aa12.68□□□□□ -0.38
SEMA4D-221ENST00000537934 TRIML1Q8N9V2 468 aa12.68□□□□□ -0.38
SEMA4D-221ENST00000537934 CNBD1Q8NA66 436 aa12.68□□□□□ -0.38
SEMA4D-221ENST00000537934 RSRC1Q96IZ7 334 aaKnown RBP12.68□□□□□ -0.38
SEMA4D-221ENST00000537934 NLRP3Q96P20 1036 aa12.68□□□□□ -0.38
SEMA4D-221ENST00000537934 CTAGE1Q96RT6 745 aa12.68□□□□□ -0.38
SEMA4D-221ENST00000537934 RUFY1Q96T51 708 aa12.68□□□□□ -0.38
SEMA4D-221ENST00000537934 MROH5Q6ZUA9 1318 aa12.67□□□□□ -0.38
SEMA4D-221ENST00000537934 EME2A4GXA9 379 aaPredicted RBP12.67□□□□□ -0.38
SEMA4D-221ENST00000537934 ENC1O14682 589 aa12.67□□□□□ -0.38
SEMA4D-221ENST00000537934 ATP1A1P05023 1023 aaKnown RBP12.67□□□□□ -0.38
SEMA4D-221ENST00000537934 IFIT1P09914 478 aaKnown RBP12.67□□□□□ -0.38
SEMA4D-221ENST00000537934 FXR1P51114 621 aaKnown RBP eCLIP12.67□□□□□ -0.38
SEMA4D-221ENST00000537934 PLCD1P51178 756 aa12.67□□□□□ -0.38
SEMA4D-221ENST00000537934 EN1Q05925 392 aaPredicted RBP12.67□□□□□ -0.38
SEMA4D-221ENST00000537934 IQCEQ6IPM2 695 aa12.67□□□□□ -0.38
SEMA4D-221ENST00000537934 PI16Q6UXB8 463 aa12.67□□□□□ -0.38
SEMA4D-221ENST00000537934 COL23A1Q86Y22 540 aaPredicted RBP12.67□□□□□ -0.38
SEMA4D-221ENST00000537934 HOOK2Q96ED9 719 aa12.67□□□□□ -0.38
SEMA4D-221ENST00000537934 SCLT1Q96NL6 688 aa12.67□□□□□ -0.38
SEMA4D-221ENST00000537934 CCT8L2Q96SF2 557 aa12.67□□□□□ -0.38
SEMA4D-221ENST00000537934 WTIPA6NIX2 430 aaPredicted RBP12.67□□□□□ -0.38
SEMA4D-221ENST00000537934 FOXN1O15353 648 aa12.67□□□□□ -0.38
SEMA4D-221ENST00000537934 HSF2BPO75031 334 aa12.67□□□□□ -0.38
SEMA4D-221ENST00000537934 POSTNQ15063 836 aa12.67□□□□□ -0.38
SEMA4D-221ENST00000537934 PTGISQ16647 500 aa12.67□□□□□ -0.38
SEMA4D-221ENST00000537934 CDCA2Q69YH5 1023 aaPredicted RBP12.67□□□□□ -0.38
SEMA4D-221ENST00000537934 KIAA1328Q86T90 577 aa12.67□□□□□ -0.38
SEMA4D-221ENST00000537934 NLRP14Q86W24 1093 aa12.67□□□□□ -0.38
SEMA4D-221ENST00000537934 RRP36Q96EU6 259 aaKnown RBP12.67□□□□□ -0.38
SEMA4D-221ENST00000537934 KIF9Q9HAQ2 790 aa12.67□□□□□ -0.38
SEMA4D-221ENST00000537934 GUCA1BQ9UMX6 200 aa12.67□□□□□ -0.38
SEMA4D-221ENST00000537934 SRGAP2O75044 1071 aa12.66□□□□□ -0.38
SEMA4D-221ENST00000537934 PPP1R37O75864 691 aa12.66□□□□□ -0.38
SEMA4D-221ENST00000537934 CHRNDQ07001 517 aa12.66□□□□□ -0.38
SEMA4D-221ENST00000537934 EZH2Q15910 746 aaKnown RBP12.66□□□□□ -0.38
SEMA4D-221ENST00000537934 FILIP1LQ4L180 1135 aa12.66□□□□□ -0.38
SEMA4D-221ENST00000537934 TTC39AQ5SRH9 613 aa12.66□□□□□ -0.38
SEMA4D-221ENST00000537934 PRR5LQ6MZQ0 368 aa12.66□□□□□ -0.38
SEMA4D-221ENST00000537934 CCDC121Q6ZUS5 278 aa12.66□□□□□ -0.38
SEMA4D-221ENST00000537934 SLC51AQ86UW1 340 aa12.66□□□□□ -0.38
SEMA4D-221ENST00000537934 KIRREL3Q8IZU9 778 aa12.66□□□□□ -0.38
SEMA4D-221ENST00000537934 MYCBPAPQ8TBZ2 947 aa12.66□□□□□ -0.38
SEMA4D-221ENST00000537934 SLF1Q9BQI6 1058 aa12.66□□□□□ -0.38
SEMA4D-221ENST00000537934 HAUS4Q9H6D7 363 aa12.66□□□□□ -0.38
SEMA4D-221ENST00000537934 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.66□□□□□ -0.38
SEMA4D-221ENST00000537934 ABHD10Q9NUJ1 306 aa12.66□□□□□ -0.38
SEMA4D-221ENST00000537934 PAG1Q9NWQ8 432 aa12.66□□□□□ -0.38
SEMA4D-221ENST00000537934 MPHOSPH10O00566 681 aaKnown RBP12.66□□□□□ -0.38
SEMA4D-221ENST00000537934 SKAP2O75563 359 aaPredicted RBP12.66□□□□□ -0.38
SEMA4D-221ENST00000537934 FAM107AO95990 144 aa12.66□□□□□ -0.38
SEMA4D-221ENST00000537934 TM4SF1P30408 202 aa12.66□□□□□ -0.38
SEMA4D-221ENST00000537934 ATP1A2P50993 1020 aa12.66□□□□□ -0.38
SEMA4D-221ENST00000537934 FKBP4Q02790 459 aaKnown RBP eCLIP12.66□□□□□ -0.38
SEMA4D-221ENST00000537934 E2F5Q15329 346 aa12.66□□□□□ -0.38
SEMA4D-221ENST00000537934 PUM3Q15397 648 aaKnown RBP12.66□□□□□ -0.38
SEMA4D-221ENST00000537934 MICAL1Q8TDZ2 1067 aa12.66□□□□□ -0.38
SEMA4D-221ENST00000537934 CAPZA3Q96KX2 299 aa12.66□□□□□ -0.38
SEMA4D-221ENST00000537934 RNPC3Q96LT9 517 aaKnown RBP12.66□□□□□ -0.38
SEMA4D-221ENST00000537934 FAM210AQ96ND0 272 aa12.66□□□□□ -0.38
SEMA4D-221ENST00000537934 HOMER3Q9NSC5 361 aa12.66□□□□□ -0.38
SEMA4D-221ENST00000537934 E7EWF7 191 aa12.65□□□□□ -0.38
SEMA4D-221ENST00000537934 TULP1O00294 542 aaPredicted RBP12.65□□□□□ -0.38
SEMA4D-221ENST00000537934 SERPINB2P05120 415 aa12.65□□□□□ -0.38
SEMA4D-221ENST00000537934 FGFR2P21802 821 aa12.65□□□□□ -0.38
SEMA4D-221ENST00000537934 NNTQ13423 1086 aa12.65□□□□□ -0.38
SEMA4D-221ENST00000537934 RBBP5Q15291 538 aaKnown RBP12.65□□□□□ -0.38
SEMA4D-221ENST00000537934 SPATA1Q5VX52 437 aa12.65□□□□□ -0.38
SEMA4D-221ENST00000537934 TAX1BP1Q86VP1 789 aa12.65□□□□□ -0.38
SEMA4D-221ENST00000537934 SPDL1Q96EA4 605 aa12.65□□□□□ -0.38
SEMA4D-221ENST00000537934 SAAL1Q96ER3 474 aa12.65□□□□□ -0.38
SEMA4D-221ENST00000537934 MAP3K14Q99558 947 aa12.65□□□□□ -0.38
SEMA4D-221ENST00000537934 RPSAP08865 295 aaKnown RBP12.65□□□□□ -0.38
SEMA4D-221ENST00000537934 PHKA1P46020 1223 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms