RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 PDE2AO00408 941 aaPredicted RBP9.43□□□□□ -0.9
SRGAP1-202ENST00000537556 SEMA3EO15041 775 aa9.43□□□□□ -0.9
SRGAP1-202ENST00000537556 PPP6R2O75170 966 aa9.43□□□□□ -0.9
SRGAP1-202ENST00000537556 TMCC1O94876 653 aa9.43□□□□□ -0.9
SRGAP1-202ENST00000537556 CTDNEP1O95476 244 aa9.43□□□□□ -0.9
SRGAP1-202ENST00000537556 POLR3DP05423 398 aaPredicted RBP9.43□□□□□ -0.9
SRGAP1-202ENST00000537556 YY1P25490 414 aa9.43□□□□□ -0.9
SRGAP1-202ENST00000537556 SLC39A14Q15043 492 aa9.43□□□□□ -0.9
SRGAP1-202ENST00000537556 TMEM154Q6P9G4 183 aa9.43□□□□□ -0.9
SRGAP1-202ENST00000537556 METTL16Q86W50 562 aaKnown RBP9.43□□□□□ -0.9
SRGAP1-202ENST00000537556 SPATA4Q8NEY3 305 aa9.43□□□□□ -0.9
SRGAP1-202ENST00000537556 SMCR8Q8TEV9 937 aaPredicted RBP9.43□□□□□ -0.9
SRGAP1-202ENST00000537556 HDAC7Q8WUI4 952 aa9.43□□□□□ -0.9
SRGAP1-202ENST00000537556 NUP88Q99567 741 aaPredicted RBP9.43□□□□□ -0.9
SRGAP1-202ENST00000537556 TMBIM4Q9HC24 238 aa9.43□□□□□ -0.9
SRGAP1-202ENST00000537556 KCNMB3Q9NPA1 279 aa9.43□□□□□ -0.9
SRGAP1-202ENST00000537556 SPATA7Q9P0W8 599 aa9.43□□□□□ -0.9
SRGAP1-202ENST00000537556 ADD3Q9UEY8 706 aaKnown RBP9.43□□□□□ -0.9
SRGAP1-202ENST00000537556 ATP7BP35670 1465 aa9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 EIF4BP23588 611 aaKnown RBP9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 CDC27P30260 824 aa9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 GBP1P32455 592 aa9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 FMR1Q06787 632 aaKnown RBP eCLIP9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 TSR1Q2NL82 804 aaKnown RBP9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 SLC4A8Q2Y0W8 1093 aa9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 C8orf74Q6P047 294 aa9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 LRIG3Q6UXM1 1119 aa9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 HDGFL2Q7Z4V5 671 aaPredicted RBP9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 ERICH1Q86X53 443 aa9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 FBF1Q8TES7 1133 aa9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 ANKRD24Q8TF21 1146 aa9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 WHAMMQ8TF30 809 aa9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 IFT74Q96LB3 600 aa9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 PREBQ9HCU5 417 aa9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 PAIP2BQ9ULR5 123 aaKnown RBP9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 CARMIL3Q8ND23 1372 aa9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 ORC4O43929 436 aa9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 PFDN1O60925 122 aa9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 CCDC166P0CW27 439 aa9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 MYBL1P10243 752 aa9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 PRLRP16471 622 aa9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 ATP6V1C1P21283 382 aa9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 BMP6P22004 513 aa9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 PAFAH1B1P43034 410 aa9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 ZNF131P52739 623 aa9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 PPP2R2AP63151 447 aa9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 CCDC92Q53HC0 331 aaPredicted RBP9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 AKNAD1Q5T1N1 836 aa9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 USPL1Q5W0Q7 1092 aa9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 ARHGAP18Q8N392 663 aa9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 RAPGEF5Q92565 580 aa9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 CHMP6Q96FZ7 201 aa9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 HINFPQ9BQA5 517 aa9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 SYT15Q9BQS2 421 aa9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 UBA5Q9GZZ9 404 aa9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 CTNNAL1Q9UBT7 734 aa9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 SALL1Q9NSC2 1324 aa9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 ZNF185O15231 689 aa9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 IL13P35225 146 aa9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 STAT6P42226 847 aa9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 PLCD1P51178 756 aa9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 SLC7A5Q01650 507 aa9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 TSNAXIP1Q2TAA8 658 aa9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 FOXP4Q8IVH2 680 aaPredicted RBP9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 PPP1R14BQ96C90 147 aa9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 CIDEBQ9UHD4 219 aa9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 SCOCQ9UIL1 159 aa9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 MAN1B1Q9UKM7 699 aa9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 TAF6LQ9Y6J9 622 aa9.42□□□□□ -0.9
SRGAP1-202ENST00000537556 CD163L1Q9NR16 1453 aa9.41□□□□□ -0.9
SRGAP1-202ENST00000537556 WFS1O76024 890 aa9.41□□□□□ -0.9
SRGAP1-202ENST00000537556 UPP2O95045 317 aa9.41□□□□□ -0.9
SRGAP1-202ENST00000537556 BAG3O95817 575 aa9.41□□□□□ -0.9
SRGAP1-202ENST00000537556 DRD4P21917 467 aa9.41□□□□□ -0.9
SRGAP1-202ENST00000537556 SP100P23497 879 aaPredicted RBP9.41□□□□□ -0.9
SRGAP1-202ENST00000537556 KRT9P35527 623 aa9.41□□□□□ -0.9
SRGAP1-202ENST00000537556 ALDH5A1P51649 535 aaPredicted RBP9.41□□□□□ -0.9
SRGAP1-202ENST00000537556 EZH2Q15910 746 aaKnown RBP9.41□□□□□ -0.9
SRGAP1-202ENST00000537556 SPATA1Q5VX52 437 aa9.41□□□□□ -0.9
SRGAP1-202ENST00000537556 ZNF365Q70YC5 407 aa9.41□□□□□ -0.9
SRGAP1-202ENST00000537556 TRMT44Q8IYL2 757 aaKnown RBP9.41□□□□□ -0.9
SRGAP1-202ENST00000537556 SMYD1Q8NB12 490 aa9.41□□□□□ -0.9
SRGAP1-202ENST00000537556 WDR66Q8TBY9 1149 aa9.41□□□□□ -0.9
SRGAP1-202ENST00000537556 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.41□□□□□ -0.93e-6■■■■■ 50.8
SRGAP1-202ENST00000537556 FAM192AQ9GZU8 254 aa9.41□□□□□ -0.9
SRGAP1-202ENST00000537556 USP44Q9H0E7 712 aa9.41□□□□□ -0.9
SRGAP1-202ENST00000537556 CNOT10Q9H9A5 744 aaKnown RBP9.41□□□□□ -0.9
SRGAP1-202ENST00000537556 TRIM10Q9UDY6 481 aa9.41□□□□□ -0.9
SRGAP1-202ENST00000537556 SNX12Q9UMY4 172 aa9.41□□□□□ -0.9
SRGAP1-202ENST00000537556 BZW2Q9Y6E2 419 aaKnown RBP9.41□□□□□ -0.9
SRGAP1-202ENST00000537556 MROH7-TTC4A0A0A0MT08 1334 aa9.41□□□□□ -0.9
SRGAP1-202ENST00000537556 ASAP2O43150 1006 aa9.41□□□□□ -0.9
SRGAP1-202ENST00000537556 USO1O60763 962 aaKnown RBP9.41□□□□□ -0.9
SRGAP1-202ENST00000537556 FAM200BP0CF97 657 aa9.41□□□□□ -0.9
SRGAP1-202ENST00000537556 MARCKSP29966 332 aaPredicted RBP9.41□□□□□ -0.9
SRGAP1-202ENST00000537556 FLIIQ13045 1269 aa9.41□□□□□ -0.9
SRGAP1-202ENST00000537556 IMMTQ16891 758 aaKnown RBP9.41□□□□□ -0.9
SRGAP1-202ENST00000537556 LONRF3Q496Y0 759 aa9.41□□□□□ -0.9
SRGAP1-202ENST00000537556 NT5DC1Q5TFE4 455 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms