RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 A0A0A0MRY4 1105 aa8.68□□□□□ -1.02
YBX3-206ENST00000536823 ADORA1P30542 326 aa8.68□□□□□ -1.02
YBX3-206ENST00000536823 ADH7P40394 386 aa8.68□□□□□ -1.02
YBX3-206ENST00000536823 TFCP2Q12800 502 aa8.68□□□□□ -1.02
YBX3-206ENST00000536823 RASA3Q14644 834 aa8.68□□□□□ -1.02
YBX3-206ENST00000536823 TSGA10IPQ3SY00 556 aa8.68□□□□□ -1.02
YBX3-206ENST00000536823 OXLD1Q5BKU9 147 aa8.68□□□□□ -1.02
YBX3-206ENST00000536823 SHISA2Q6UWI4 295 aa8.68□□□□□ -1.02
YBX3-206ENST00000536823 ZDHHC15Q96MV8 337 aa8.68□□□□□ -1.02
YBX3-206ENST00000536823 MRIQ9BWK5 157 aa8.68□□□□□ -1.02
YBX3-206ENST00000536823 TDRD3Q9H7E2 651 aaKnown RBP8.68□□□□□ -1.02
YBX3-206ENST00000536823 GNL3LQ9NVN8 582 aaKnown RBP8.68□□□□□ -1.02
YBX3-206ENST00000536823 AKAP2Q9Y2D5 859 aa8.68□□□□□ -1.02
YBX3-206ENST00000536823 PDS5AQ29RF7 1337 aaKnown RBP8.68□□□□□ -1.02
YBX3-206ENST00000536823 AKAP11Q9UKA4 1901 aa8.68□□□□□ -1.02
YBX3-206ENST00000536823 A0A1B0GUL7 405 aa8.67□□□□□ -1.02
YBX3-206ENST00000536823 PRDX5P30044 214 aa8.67□□□□□ -1.02
YBX3-206ENST00000536823 KIF23Q02241 960 aaPredicted RBP8.67□□□□□ -1.02
YBX3-206ENST00000536823 MVPQ14764 893 aaKnown RBP8.67□□□□□ -1.02
YBX3-206ENST00000536823 MAP3K11Q16584 847 aa8.67□□□□□ -1.02
YBX3-206ENST00000536823 SUPT20HL1Q3ZLR7 823 aa8.67□□□□□ -1.02
YBX3-206ENST00000536823 LDLRAD1Q5T700 205 aa8.67□□□□□ -1.02
YBX3-206ENST00000536823 CCDC102BQ68D86 513 aa8.67□□□□□ -1.02
YBX3-206ENST00000536823 ZNF295-AS1Q8N0V1 137 aa8.67□□□□□ -1.02
YBX3-206ENST00000536823 SSH3Q8TE77 659 aa8.67□□□□□ -1.02
YBX3-206ENST00000536823 SALL1Q9NSC2 1324 aa8.67□□□□□ -1.02
YBX3-206ENST00000536823 PCMTD2Q9NV79 361 aa8.67□□□□□ -1.02
YBX3-206ENST00000536823 CASP8AP2Q9UKL3 1982 aa8.67□□□□□ -1.02
YBX3-206ENST00000536823 DENND2AQ9ULE3 1009 aa8.67□□□□□ -1.02
YBX3-206ENST00000536823 OTOFQ9HC10 1997 aa8.66□□□□□ -1.02
YBX3-206ENST00000536823 RPAP1Q9BWH6 1393 aaPredicted RBP8.66□□□□□ -1.02
YBX3-206ENST00000536823 TCP10L2B9ZVM9 353 aa8.66□□□□□ -1.02
YBX3-206ENST00000536823 ZBTB7BO15156 539 aaPredicted RBP8.66□□□□□ -1.02
YBX3-206ENST00000536823 PPP1R12BO60237 982 aaPredicted RBP8.66□□□□□ -1.02
YBX3-206ENST00000536823 LILRB5O75023 590 aa8.66□□□□□ -1.02
YBX3-206ENST00000536823 LDHBP07195 334 aaKnown RBP8.66□□□□□ -1.02
YBX3-206ENST00000536823 TIMM10P62072 90 aa8.66□□□□□ -1.02
YBX3-206ENST00000536823 RAC1P63000 192 aa8.66□□□□□ -1.02
YBX3-206ENST00000536823 ATP8B2P98198 1209 aa8.66□□□□□ -1.02
YBX3-206ENST00000536823 G3BP1Q13283 466 aaKnown RBP eCLIP8.66□□□□□ -1.02
YBX3-206ENST00000536823 RASGRF1Q13972 1273 aa8.66□□□□□ -1.02
YBX3-206ENST00000536823 PRKG1Q13976 671 aa8.66□□□□□ -1.02
YBX3-206ENST00000536823 NBPF12Q5TAG4 269 aaPredicted RBP8.66□□□□□ -1.02
YBX3-206ENST00000536823 FKBP1CQ5VVH2 108 aa8.66□□□□□ -1.02
YBX3-206ENST00000536823 APOBEC3HQ6NTF7 200 aaKnown RBP8.66□□□□□ -1.02
YBX3-206ENST00000536823 HHIPL2Q6UWX4 724 aa8.66□□□□□ -1.02
YBX3-206ENST00000536823 C20orf204Q6ZNR8 217 aa8.66□□□□□ -1.02
YBX3-206ENST00000536823 PANK1Q8TE04 598 aa8.66□□□□□ -1.02
YBX3-206ENST00000536823 SLC30A3Q99726 388 aa8.66□□□□□ -1.02
YBX3-206ENST00000536823 SSBP4Q9BWG4 385 aaPredicted RBP8.66□□□□□ -1.02
YBX3-206ENST00000536823 SAGE1Q9NXZ1 904 aa8.66□□□□□ -1.02
YBX3-206ENST00000536823 TMOD2Q9NZR1 351 aa8.66□□□□□ -1.02
YBX3-206ENST00000536823 ANGEL1Q9UNK9 670 aaKnown RBP8.66□□□□□ -1.02
YBX3-206ENST00000536823 DAGLAQ9Y4D2 1042 aa8.66□□□□□ -1.02
YBX3-206ENST00000536823 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.66□□□□□ -1.02
YBX3-206ENST00000536823 MYH2Q9UKX2 1941 aa8.65□□□□□ -1.02
YBX3-206ENST00000536823 UNCXA6NJT0 531 aa8.65□□□□□ -1.02
YBX3-206ENST00000536823 IREB2P48200 963 aaKnown RBP8.65□□□□□ -1.02
YBX3-206ENST00000536823 TNNI2P48788 182 aa8.65□□□□□ -1.02
YBX3-206ENST00000536823 CACNB3P54284 484 aa8.65□□□□□ -1.02
YBX3-206ENST00000536823 SEMA3FQ13275 785 aa8.65□□□□□ -1.02
YBX3-206ENST00000536823 ZGPATQ8N5A5 531 aaKnown RBP8.65□□□□□ -1.02
YBX3-206ENST00000536823 TEPSINQ96N21 525 aa8.65□□□□□ -1.02
YBX3-206ENST00000536823 CSRNP1Q96S65 589 aa8.65□□□□□ -1.02
YBX3-206ENST00000536823 TMEM39BQ9GZU3 492 aa8.65□□□□□ -1.02
YBX3-206ENST00000536823 GPR108Q9NPR9 543 aa8.65□□□□□ -1.02
YBX3-206ENST00000536823 RCAN3Q9UKA8 241 aa8.65□□□□□ -1.02
YBX3-206ENST00000536823 FZD1Q9UP38 647 aa8.65□□□□□ -1.02
YBX3-206ENST00000536823 LAMB1P07942 1786 aa8.65□□□□□ -1.02
YBX3-206ENST00000536823 GAKO14976 1311 aa8.64□□□□□ -1.03
YBX3-206ENST00000536823 ARID4AP29374 1257 aaPredicted RBP8.64□□□□□ -1.03
YBX3-206ENST00000536823 OS9Q13438 667 aaPredicted RBP8.64□□□□□ -1.03
YBX3-206ENST00000536823 GORABQ5T7V8 394 aa8.64□□□□□ -1.03
YBX3-206ENST00000536823 CEP85Q6P2H3 762 aa8.64□□□□□ -1.03
YBX3-206ENST00000536823 FAM83AQ86UY5 434 aa8.64□□□□□ -1.03
YBX3-206ENST00000536823 CLMNQ96JQ2 1002 aa8.64□□□□□ -1.03
YBX3-206ENST00000536823 NEUROD6Q96NK8 337 aa8.64□□□□□ -1.03
YBX3-206ENST00000536823 UCN2Q96RP3 112 aa8.64□□□□□ -1.03
YBX3-206ENST00000536823 RNF186Q9NXI6 227 aa8.64□□□□□ -1.03
YBX3-206ENST00000536823 SERTAD1Q9UHV2 236 aa8.64□□□□□ -1.03
YBX3-206ENST00000536823 NOP58Q9Y2X3 529 aaKnown RBP8.64□□□□□ -1.03
YBX3-206ENST00000536823 RFX7Q2KHR2 1363 aa8.63□□□□□ -1.03
YBX3-206ENST00000536823 CDK2AP1O14519 115 aa8.63□□□□□ -1.03
YBX3-206ENST00000536823 USP2O75604 605 aaPredicted RBP8.63□□□□□ -1.03
YBX3-206ENST00000536823 SURF6O75683 361 aaKnown RBP8.63□□□□□ -1.03
YBX3-206ENST00000536823 TRPA1O75762 1119 aa8.63□□□□□ -1.03
YBX3-206ENST00000536823 ZBTB48P10074 688 aaPredicted RBP8.63□□□□□ -1.03
YBX3-206ENST00000536823 SREBF2Q12772 1141 aa8.63□□□□□ -1.03
YBX3-206ENST00000536823 TNNI3KQ59H18 835 aa8.63□□□□□ -1.03
YBX3-206ENST00000536823 SPTY2D1Q68D10 685 aaPredicted RBP8.63□□□□□ -1.03
YBX3-206ENST00000536823 CDC42EP5Q6NZY7 148 aa8.63□□□□□ -1.03
YBX3-206ENST00000536823 PI16Q6UXB8 463 aa8.63□□□□□ -1.03
YBX3-206ENST00000536823 DZIP1Q86YF9 867 aaKnown RBP8.63□□□□□ -1.03
YBX3-206ENST00000536823 ANKRD13AQ8IZ07 590 aa8.63□□□□□ -1.03
YBX3-206ENST00000536823 WNK4Q96J92 1243 aa8.63□□□□□ -1.03
YBX3-206ENST00000536823 PPP1R12CQ9BZL4 782 aa8.63□□□□□ -1.03
YBX3-206ENST00000536823 HMG20BQ9P0W2 317 aa8.63□□□□□ -1.03
YBX3-206ENST00000536823 USP3Q9Y6I4 520 aa8.63□□□□□ -1.03
YBX3-206ENST00000536823 FPGT-TNNI3KV9GXZ4 949 aa8.63□□□□□ -1.03
YBX3-206ENST00000536823 ARID1BQ8NFD5 2236 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms