RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 A0A1W2PQY0 241 aa14.73□□□□□ -0.05
PRKDC-207ENST00000536483 PQBP1O60828 265 aaKnown RBP14.73□□□□□ -0.05
PRKDC-207ENST00000536483 ADAMTS4O75173 837 aa14.73□□□□□ -0.05
PRKDC-207ENST00000536483 SNAI1O95863 264 aaPredicted RBP14.73□□□□□ -0.05
PRKDC-207ENST00000536483 CLTBP09497 229 aa14.73□□□□□ -0.05
PRKDC-207ENST00000536483 IRX6P78412 446 aaPredicted RBP14.73□□□□□ -0.05
PRKDC-207ENST00000536483 TFAP4Q01664 338 aa14.73□□□□□ -0.05
PRKDC-207ENST00000536483 TTC22Q5TAA0 569 aa14.73□□□□□ -0.05
PRKDC-207ENST00000536483 CPXCR1Q8N123 301 aa14.73□□□□□ -0.05
PRKDC-207ENST00000536483 PRPF38AQ8NAV1 312 aaKnown RBP14.73□□□□□ -0.05
PRKDC-207ENST00000536483 CDX2Q99626 313 aaPredicted RBP14.73□□□□□ -0.05
PRKDC-207ENST00000536483 COL25A1Q9BXS0 654 aaPredicted RBP14.73□□□□□ -0.05
PRKDC-207ENST00000536483 TCP11L1Q9NUJ3 509 aa14.73□□□□□ -0.05
PRKDC-207ENST00000536483 CLIP2Q9UDT6 1046 aa14.73□□□□□ -0.05
PRKDC-207ENST00000536483 PLXNA1Q9UIW2 1896 aa14.72□□□□□ -0.05
PRKDC-207ENST00000536483 ATP2A1O14983 1001 aa14.72□□□□□ -0.05
PRKDC-207ENST00000536483 TSPY3P0CV98 308 aa14.72□□□□□ -0.05
PRKDC-207ENST00000536483 TSPY8P0CW00 308 aa14.72□□□□□ -0.05
PRKDC-207ENST00000536483 GSPT1P15170 499 aaKnown RBP14.72□□□□□ -0.05
PRKDC-207ENST00000536483 RAG1P15918 1043 aa14.72□□□□□ -0.05
PRKDC-207ENST00000536483 EPHB4P54760 987 aa14.72□□□□□ -0.05
PRKDC-207ENST00000536483 SMAD3P84022 425 aaKnown RBP14.72□□□□□ -0.05
PRKDC-207ENST00000536483 MSL3Q8N5Y2 521 aaKnown RBP14.72□□□□□ -0.05
PRKDC-207ENST00000536483 KIFC2Q96AC6 838 aa14.72□□□□□ -0.05
PRKDC-207ENST00000536483 IL17RBQ9NRM6 502 aa14.72□□□□□ -0.05
PRKDC-207ENST00000536483 ZHX1Q9UKY1 873 aaPredicted RBP14.72□□□□□ -0.05
PRKDC-207ENST00000536483 FAM184BQ9ULE4 1060 aa14.72□□□□□ -0.05
PRKDC-207ENST00000536483 GTF3C3Q9Y5Q9 886 aa14.72□□□□□ -0.05
PRKDC-207ENST00000536483 PRUNE2Q8WUY3 3088 aa14.72□□□□□ -0.05
PRKDC-207ENST00000536483 SYNRGQ9UMZ2 1314 aa14.71□□□□□ -0.05
PRKDC-207ENST00000536483 DNAJC25-GNG10A0A024R161 153 aa14.71□□□□□ -0.05
PRKDC-207ENST00000536483 KIAA0355O15063 1070 aa14.71□□□□□ -0.05
PRKDC-207ENST00000536483 PLA2G6O60733 806 aa14.71□□□□□ -0.05
PRKDC-207ENST00000536483 ZBED4O75132 1171 aa14.71□□□□□ -0.05
PRKDC-207ENST00000536483 ACLYP53396 1101 aa14.71□□□□□ -0.05
PRKDC-207ENST00000536483 CTDSPL2Q05D32 466 aa14.71□□□□□ -0.05
PRKDC-207ENST00000536483 MAMDC4Q6UXC1 1216 aa14.71□□□□□ -0.05
PRKDC-207ENST00000536483 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.71□□□□□ -0.05
PRKDC-207ENST00000536483 KLHDC9Q8NEP7 349 aa14.71□□□□□ -0.05
PRKDC-207ENST00000536483 GMCL1Q96IK5 515 aa14.71□□□□□ -0.05
PRKDC-207ENST00000536483 RNPC3Q96LT9 517 aaKnown RBP14.71□□□□□ -0.05
PRKDC-207ENST00000536483 TSEN34Q9BSV6 310 aaKnown RBP14.71□□□□□ -0.05
PRKDC-207ENST00000536483 DSCC1Q9BVC3 393 aa14.71□□□□□ -0.05
PRKDC-207ENST00000536483 TTYH1Q9H313 450 aaPredicted RBP14.71□□□□□ -0.05
PRKDC-207ENST00000536483 RAVER2Q9HCJ3 691 aaKnown RBP14.71□□□□□ -0.05
PRKDC-207ENST00000536483 STARD7Q9NQZ5 370 aa14.71□□□□□ -0.05
PRKDC-207ENST00000536483 DIAPH3Q9NSV4 1193 aa14.71□□□□□ -0.05
PRKDC-207ENST00000536483 TMEM39AQ9NV64 488 aa14.71□□□□□ -0.05
PRKDC-207ENST00000536483 CTDP1Q9Y5B0 961 aaPredicted RBP14.71□□□□□ -0.05
PRKDC-207ENST00000536483 SYNGAP1Q96PV0 1343 aa14.7□□□□□ -0.06
PRKDC-207ENST00000536483 MYADML2A6NDP7 307 aa14.7□□□□□ -0.06
PRKDC-207ENST00000536483 FDX1P10109 184 aa14.7□□□□□ -0.06
PRKDC-207ENST00000536483 IRX5P78411 483 aaPredicted RBP14.7□□□□□ -0.06
PRKDC-207ENST00000536483 FAAP100Q0VG06 881 aa14.7□□□□□ -0.06
PRKDC-207ENST00000536483 KCNA10Q16322 511 aa14.7□□□□□ -0.06
PRKDC-207ENST00000536483 CWC27Q6UX04 472 aaKnown RBP14.7□□□□□ -0.06
PRKDC-207ENST00000536483 NUP133Q8WUM0 1156 aa14.7□□□□□ -0.06
PRKDC-207ENST00000536483 STAG1Q8WVM7 1258 aa14.7□□□□□ -0.06
PRKDC-207ENST00000536483 MYLIPQ8WY64 445 aa14.7□□□□□ -0.06
PRKDC-207ENST00000536483 INCENPQ9NQS7 918 aa14.7□□□□□ -0.06
PRKDC-207ENST00000536483 MOXD2PA6NHM9 499 aa14.69□□□□□ -0.06
PRKDC-207ENST00000536483 TSPY2A6NKD2 308 aa14.69□□□□□ -0.06
PRKDC-207ENST00000536483 DCDC2CA8MYV0 355 aa14.69□□□□□ -0.06
PRKDC-207ENST00000536483 DUSP11O75319 330 aaKnown RBP14.69□□□□□ -0.06
PRKDC-207ENST00000536483 FPGSQ05932 587 aa14.69□□□□□ -0.06
PRKDC-207ENST00000536483 ACVR2BQ13705 512 aa14.69□□□□□ -0.06
PRKDC-207ENST00000536483 AKNAD1Q5T1N1 836 aa14.69□□□□□ -0.06
PRKDC-207ENST00000536483 CCSAPQ6IQ19 270 aaPredicted RBP14.69□□□□□ -0.06
PRKDC-207ENST00000536483 ANKRD33Q7Z3H0 272 aa14.69□□□□□ -0.06
PRKDC-207ENST00000536483 ZNF467Q7Z7K2 595 aaPredicted RBP14.69□□□□□ -0.06
PRKDC-207ENST00000536483 LRRC47Q8N1G4 583 aaKnown RBP14.69□□□□□ -0.06
PRKDC-207ENST00000536483 ANKRD35Q8N283 1001 aa14.69□□□□□ -0.06
PRKDC-207ENST00000536483 MAFAQ8NHW3 353 aaPredicted RBP14.69□□□□□ -0.06
PRKDC-207ENST00000536483 FGD4Q96M96 766 aa14.69□□□□□ -0.06
PRKDC-207ENST00000536483 TTC14Q96N46 770 aa14.69□□□□□ -0.06
PRKDC-207ENST00000536483 TOX2Q96NM4 488 aa14.69□□□□□ -0.06
PRKDC-207ENST00000536483 SLC38A10Q9HBR0 1119 aa14.69□□□□□ -0.06
PRKDC-207ENST00000536483 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.69□□□□□ -0.06
PRKDC-207ENST00000536483 FEM1BQ9UK73 627 aa14.69□□□□□ -0.06
PRKDC-207ENST00000536483 RAD50Q92878 1312 aa14.68□□□□□ -0.06
PRKDC-207ENST00000536483 ADCY6O43306 1168 aa14.68□□□□□ -0.06
PRKDC-207ENST00000536483 C6orf222P0C671 652 aaPredicted RBP14.68□□□□□ -0.06
PRKDC-207ENST00000536483 OAZ1P54368 228 aa14.68□□□□□ -0.06
PRKDC-207ENST00000536483 SLFN13Q68D06 897 aa14.68□□□□□ -0.06
PRKDC-207ENST00000536483 RNF41Q9H4P4 317 aaPredicted RBP14.68□□□□□ -0.06
PRKDC-207ENST00000536483 RANBP6O60518 1105 aaKnown RBP14.67□□□□□ -0.06
PRKDC-207ENST00000536483 BMP3P12645 472 aa14.67□□□□□ -0.06
PRKDC-207ENST00000536483 CHMLP26374 656 aa14.67□□□□□ -0.06
PRKDC-207ENST00000536483 CCDC144BQ3MJ40 725 aa14.67□□□□□ -0.06
PRKDC-207ENST00000536483 RCSD1Q6JBY9 416 aa14.67□□□□□ -0.06
PRKDC-207ENST00000536483 MFSD6Q6ZSS7 791 aa14.67□□□□□ -0.06
PRKDC-207ENST00000536483 ARMCX2Q7L311 632 aa14.67□□□□□ -0.06
PRKDC-207ENST00000536483 CHST13Q8NET6 341 aa14.67□□□□□ -0.06
PRKDC-207ENST00000536483 GLT1D1Q96MS3 346 aa14.67□□□□□ -0.06
PRKDC-207ENST00000536483 ABHD16BQ9H3Z7 469 aa14.67□□□□□ -0.06
PRKDC-207ENST00000536483 HOMER2Q9NSB8 354 aa14.67□□□□□ -0.06
PRKDC-207ENST00000536483 FBXO40Q9UH90 709 aa14.67□□□□□ -0.06
PRKDC-207ENST00000536483 CTNNA3Q9UI47 895 aa14.67□□□□□ -0.06
PRKDC-207ENST00000536483 SPTBN5Q9NRC6 3674 aaKnown RBP14.66□□□□□ -0.06
PRKDC-207ENST00000536483 ZNF213O14771 459 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms