RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 SHISA4Q96DD7 197 aa15.82■□□□□ 0.12
RPAIN-205ENST00000536255 JAKMIP1Q96N16 626 aaKnown RBP15.82■□□□□ 0.12
RPAIN-205ENST00000536255 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.82■□□□□ 0.12
RPAIN-205ENST00000536255 RPTORQ8N122 1335 aa15.82■□□□□ 0.12
RPAIN-205ENST00000536255 COBLO75128 1261 aa15.81■□□□□ 0.12
RPAIN-205ENST00000536255 PDHBP11177 359 aa15.81■□□□□ 0.12
RPAIN-205ENST00000536255 KCTD2Q14681 263 aa15.81■□□□□ 0.12
RPAIN-205ENST00000536255 ADCK5Q3MIX3 580 aa15.81■□□□□ 0.12
RPAIN-205ENST00000536255 BLOC1S2Q6QNY1 142 aa15.81■□□□□ 0.12
RPAIN-205ENST00000536255 NPLOC4Q8TAT6 608 aa15.81■□□□□ 0.12
RPAIN-205ENST00000536255 IGDCC4Q8TDY8 1250 aa15.81■□□□□ 0.12
RPAIN-205ENST00000536255 MMP19Q99542 508 aa15.81■□□□□ 0.12
RPAIN-205ENST00000536255 RAVER2Q9HCJ3 691 aaKnown RBP15.81■□□□□ 0.12
RPAIN-205ENST00000536255 HMX1Q9NP08 348 aaPredicted RBP15.81■□□□□ 0.12
RPAIN-205ENST00000536255 SLC5A4Q9NY91 659 aa15.81■□□□□ 0.12
RPAIN-205ENST00000536255 FLRT1Q9NZU1 646 aa15.81■□□□□ 0.12
RPAIN-205ENST00000536255 CCDC69A6NI79 296 aa15.8■□□□□ 0.12
RPAIN-205ENST00000536255 SGPL1O95470 568 aa15.8■□□□□ 0.12
RPAIN-205ENST00000536255 SNHG28P0DPA3 235 aa15.8■□□□□ 0.12
RPAIN-205ENST00000536255 LIFRP42702 1097 aa15.8■□□□□ 0.12
RPAIN-205ENST00000536255 ANAPC15P60006 121 aa15.8■□□□□ 0.12
RPAIN-205ENST00000536255 FGD1P98174 961 aa15.8■□□□□ 0.12
RPAIN-205ENST00000536255 CACNB2Q08289 660 aaPredicted RBP15.8■□□□□ 0.12
RPAIN-205ENST00000536255 ASPRV1Q53RT3 343 aa15.8■□□□□ 0.12
RPAIN-205ENST00000536255 MFSD14CQ5VZR4 134 aa15.8■□□□□ 0.12
RPAIN-205ENST00000536255 BTNL9Q6UXG8 535 aa15.8■□□□□ 0.12
RPAIN-205ENST00000536255 NFXL1Q6ZNB6 911 aa15.8■□□□□ 0.12
RPAIN-205ENST00000536255 CATIPQ7Z7H3 387 aa15.8■□□□□ 0.12
RPAIN-205ENST00000536255 DEFB118Q96PH6 123 aa15.8■□□□□ 0.12
RPAIN-205ENST00000536255 PRR12Q9ULL5 1215 aa15.8■□□□□ 0.12
RPAIN-205ENST00000536255 RIPK3Q9Y572 518 aa15.8■□□□□ 0.12
RPAIN-205ENST00000536255 MKI67P46013 3256 aaKnown RBP15.79■□□□□ 0.12
RPAIN-205ENST00000536255 FRMPD2Q68DX3 1309 aaPredicted RBP15.79■□□□□ 0.12
RPAIN-205ENST00000536255 SH2B2O14492 632 aaPredicted RBP15.79■□□□□ 0.12
RPAIN-205ENST00000536255 IGHA2P01877 340 aa15.79■□□□□ 0.12
RPAIN-205ENST00000536255 PARP1P09874 1014 aaKnown RBP15.79■□□□□ 0.12
RPAIN-205ENST00000536255 CASTP20810 708 aaKnown RBP15.79■□□□□ 0.12
RPAIN-205ENST00000536255 SLC16A2P36021 539 aa15.79■□□□□ 0.12
RPAIN-205ENST00000536255 SLC4A3P48751 1232 aa15.79■□□□□ 0.12
RPAIN-205ENST00000536255 EXOSC10Q01780 885 aaKnown RBP15.79■□□□□ 0.12
RPAIN-205ENST00000536255 ZNF543Q08ER8 600 aa15.79■□□□□ 0.12
RPAIN-205ENST00000536255 OLFML2BQ68BL8 750 aa15.79■□□□□ 0.12
RPAIN-205ENST00000536255 TTBK2Q6IQ55 1244 aa15.79■□□□□ 0.12
RPAIN-205ENST00000536255 LY9Q9HBG7 655 aa15.79■□□□□ 0.12
RPAIN-205ENST00000536255 GPCPD1Q9NPB8 672 aa15.79■□□□□ 0.12
RPAIN-205ENST00000536255 TNRC18O15417 2968 aaPredicted RBP15.79■□□□□ 0.12
RPAIN-205ENST00000536255 ZNF536O15090 1300 aa15.78■□□□□ 0.12
RPAIN-205ENST00000536255 DDAH1O94760 285 aa15.78■□□□□ 0.12
RPAIN-205ENST00000536255 PGK2P07205 417 aa15.78■□□□□ 0.12
RPAIN-205ENST00000536255 CAPN2P17655 700 aa15.78■□□□□ 0.12
RPAIN-205ENST00000536255 CYP2C19P33261 490 aa15.78■□□□□ 0.12
RPAIN-205ENST00000536255 SYDE2Q5VT97 1194 aa15.78■□□□□ 0.12
RPAIN-205ENST00000536255 SYNE3Q6ZMZ3 975 aa15.78■□□□□ 0.12
RPAIN-205ENST00000536255 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.78■□□□□ 0.12
RPAIN-205ENST00000536255 CHST13Q8NET6 341 aa15.78■□□□□ 0.12
RPAIN-205ENST00000536255 MAML3Q96JK9 1138 aa15.78■□□□□ 0.12
RPAIN-205ENST00000536255 TM6SF1Q9BZW5 370 aa15.78■□□□□ 0.12
RPAIN-205ENST00000536255 CRISPLD2Q9H0B8 497 aa15.78■□□□□ 0.12
RPAIN-205ENST00000536255 UPF2Q9HAU5 1272 aaKnown RBP15.78■□□□□ 0.12
RPAIN-205ENST00000536255 FBXO40Q9UH90 709 aa15.78■□□□□ 0.12
RPAIN-205ENST00000536255 TFRCP02786 760 aaKnown RBP15.77■□□□□ 0.12
RPAIN-205ENST00000536255 CALM1P0DP23 149 aa15.77■□□□□ 0.12
RPAIN-205ENST00000536255 CALM2P0DP24 149 aa15.77■□□□□ 0.12
RPAIN-205ENST00000536255 CALM3P0DP25 149 aa15.77■□□□□ 0.12
RPAIN-205ENST00000536255 RPS6KB1P23443 525 aa15.77■□□□□ 0.12
RPAIN-205ENST00000536255 CCND3P30281 292 aaPredicted RBP15.77■□□□□ 0.12
RPAIN-205ENST00000536255 SNAP25P60880 206 aa15.77■□□□□ 0.12
RPAIN-205ENST00000536255 CCDC174Q6PII3 467 aa15.77■□□□□ 0.12
RPAIN-205ENST00000536255 SGMS1Q86VZ5 419 aa15.77■□□□□ 0.12
RPAIN-205ENST00000536255 AGBL1Q96MI9 1066 aa15.77■□□□□ 0.12
RPAIN-205ENST00000536255 MAP3K14Q99558 947 aa15.77■□□□□ 0.12
RPAIN-205ENST00000536255 LRRC2Q9BYS8 371 aa15.77■□□□□ 0.12
RPAIN-205ENST00000536255 RANBP17Q9H2T7 1088 aaKnown RBP15.77■□□□□ 0.12
RPAIN-205ENST00000536255 HOMER2Q9NSB8 354 aa15.77■□□□□ 0.12
RPAIN-205ENST00000536255 SLC12A7Q9Y666 1083 aa15.77■□□□□ 0.12
RPAIN-205ENST00000536255 CYP46A1Q9Y6A2 500 aa15.77■□□□□ 0.12
RPAIN-205ENST00000536255 SEC24BO95487 1268 aa15.76■□□□□ 0.11
RPAIN-205ENST00000536255 KIF5BP33176 963 aa15.76■□□□□ 0.11
RPAIN-205ENST00000536255 TROAPQ12815 778 aa15.76■□□□□ 0.11
RPAIN-205ENST00000536255 ZNF792Q3KQV3 632 aa15.76■□□□□ 0.11
RPAIN-205ENST00000536255 TKFCQ3LXA3 575 aa15.76■□□□□ 0.11
RPAIN-205ENST00000536255 RUFY3Q7L099 469 aa15.76■□□□□ 0.11
RPAIN-205ENST00000536255 ZNF654Q8IZM8 581 aa15.76■□□□□ 0.11
RPAIN-205ENST00000536255 CTCFLQ8NI51 663 aaPredicted RBP15.76■□□□□ 0.11
RPAIN-205ENST00000536255 NUP133Q8WUM0 1156 aa15.76■□□□□ 0.11
RPAIN-205ENST00000536255 DDX11Q96FC9 970 aa15.76■□□□□ 0.11
RPAIN-205ENST00000536255 ACAD9Q9H845 621 aa15.76■□□□□ 0.11
RPAIN-205ENST00000536255 SENP2Q9HC62 589 aa15.76■□□□□ 0.11
RPAIN-205ENST00000536255 ZSWIM6Q9HCJ5 1215 aa15.76■□□□□ 0.11
RPAIN-205ENST00000536255 RNF146Q9NTX7 359 aa15.76■□□□□ 0.11
RPAIN-205ENST00000536255 PNMA2Q9UL42 364 aa15.76■□□□□ 0.11
RPAIN-205ENST00000536255 DIS3Q9Y2L1 958 aaKnown RBP15.76■□□□□ 0.11
RPAIN-205ENST00000536255 DNAJC25-GNG10A0A024R161 153 aa15.75■□□□□ 0.11
RPAIN-205ENST00000536255 FARP2O94887 1054 aaPredicted RBP15.75■□□□□ 0.11
RPAIN-205ENST00000536255 ICAM1P05362 532 aa15.75■□□□□ 0.11
RPAIN-205ENST00000536255 GOLGA8HP0CJ92 632 aa15.75■□□□□ 0.11
RPAIN-205ENST00000536255 CYBAP13498 195 aa15.75■□□□□ 0.11
RPAIN-205ENST00000536255 GRM4Q14833 912 aa15.75■□□□□ 0.11
RPAIN-205ENST00000536255 UBE2Q1Q7Z7E8 422 aa15.75■□□□□ 0.11
RPAIN-205ENST00000536255 ANKRD35Q8N283 1001 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms