RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 MYH4Q9Y623 1939 aa9.62□□□□□ -0.87
CHFR-211ENST00000535897 MYO9BQ13459 2157 aa9.61□□□□□ -0.87
CHFR-211ENST00000535897 NCOR1O75376 2440 aa9.61□□□□□ -0.87
CHFR-211ENST00000535897 GREB1LQ9C091 1923 aaPredicted RBP9.61□□□□□ -0.87
CHFR-211ENST00000535897 DNAJC25-GNG10A0A024R161 153 aa9.61□□□□□ -0.87
CHFR-211ENST00000535897 ADCY6O43306 1168 aa9.61□□□□□ -0.87
CHFR-211ENST00000535897 MS4A1P11836 297 aa9.61□□□□□ -0.87
CHFR-211ENST00000535897 CYP2C18P33260 490 aa9.61□□□□□ -0.87
CHFR-211ENST00000535897 CDK7P50613 346 aa9.61□□□□□ -0.87
CHFR-211ENST00000535897 GJA9P57773 515 aa9.61□□□□□ -0.87
CHFR-211ENST00000535897 BEX3Q00994 111 aa9.61□□□□□ -0.87
CHFR-211ENST00000535897 IKQ13123 557 aaPredicted RBP9.61□□□□□ -0.87
CHFR-211ENST00000535897 RAB30Q15771 203 aa9.61□□□□□ -0.87
CHFR-211ENST00000535897 CCSAPQ6IQ19 270 aaPredicted RBP9.61□□□□□ -0.87
CHFR-211ENST00000535897 ARMCX2Q7L311 632 aa9.61□□□□□ -0.87
CHFR-211ENST00000535897 FAM126BQ8IXS8 530 aa9.61□□□□□ -0.87
CHFR-211ENST00000535897 CCDC144CPQ8IYA2 1237 aa9.61□□□□□ -0.87
CHFR-211ENST00000535897 ADAMTS19Q8TE59 1207 aa9.61□□□□□ -0.87
CHFR-211ENST00000535897 ASB2Q96Q27 587 aa9.61□□□□□ -0.87
CHFR-211ENST00000535897 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.61□□□□□ -0.87
CHFR-211ENST00000535897 PUS7LQ9H0K6 701 aaKnown RBP9.61□□□□□ -0.87
CHFR-211ENST00000535897 TSPYL2Q9H2G4 693 aaPredicted RBP9.61□□□□□ -0.87
CHFR-211ENST00000535897 CLIP2Q9UDT6 1046 aa9.61□□□□□ -0.87
CHFR-211ENST00000535897 FBXO40Q9UH90 709 aa9.61□□□□□ -0.87
CHFR-211ENST00000535897 GBF1Q92538 1859 aa9.6□□□□□ -0.87
CHFR-211ENST00000535897 PRDM1O75626 825 aa9.6□□□□□ -0.87
CHFR-211ENST00000535897 FGBP02675 491 aa9.6□□□□□ -0.87
CHFR-211ENST00000535897 APPP05067 770 aa9.6□□□□□ -0.87
CHFR-211ENST00000535897 RASA1P20936 1047 aa9.6□□□□□ -0.87
CHFR-211ENST00000535897 TDO2P48775 406 aa9.6□□□□□ -0.87
CHFR-211ENST00000535897 MRPS5P82675 430 aaKnown RBP9.6□□□□□ -0.87
CHFR-211ENST00000535897 TNFAIP2Q03169 654 aa9.6□□□□□ -0.87
CHFR-211ENST00000535897 AKNAD1Q5T1N1 836 aa9.6□□□□□ -0.87
CHFR-211ENST00000535897 CXCL17Q6UXB2 119 aa9.6□□□□□ -0.87
CHFR-211ENST00000535897 OTOP2Q7RTS6 562 aa9.6□□□□□ -0.87
CHFR-211ENST00000535897 ZNF444Q8N0Y2 327 aaPredicted RBP9.6□□□□□ -0.87
CHFR-211ENST00000535897 LRRC47Q8N1G4 583 aaKnown RBP9.6□□□□□ -0.87
CHFR-211ENST00000535897 MICALL1Q8N3F8 863 aa9.6□□□□□ -0.87
CHFR-211ENST00000535897 CHST13Q8NET6 341 aa9.6□□□□□ -0.87
CHFR-211ENST00000535897 UHRF1Q96T88 793 aaPredicted RBP9.6□□□□□ -0.87
CHFR-211ENST00000535897 AP5M1Q9H0R1 490 aa9.6□□□□□ -0.87
CHFR-211ENST00000535897 UPF3AQ9H1J1 476 aaKnown RBP9.6□□□□□ -0.87
CHFR-211ENST00000535897 NKX2-4Q9H2Z4 354 aa9.6□□□□□ -0.87
CHFR-211ENST00000535897 HIPK3Q9H422 1215 aa9.6□□□□□ -0.87
CHFR-211ENST00000535897 SLC38A10Q9HBR0 1119 aa9.6□□□□□ -0.87
CHFR-211ENST00000535897 ZNF287Q9HBT7 754 aa9.6□□□□□ -0.87
CHFR-211ENST00000535897 IL23AQ9NPF7 189 aa9.6□□□□□ -0.87
CHFR-211ENST00000535897 NYAP2Q9P242 653 aa9.6□□□□□ -0.87
CHFR-211ENST00000535897 FEM1BQ9UK73 627 aa9.6□□□□□ -0.87
CHFR-211ENST00000535897 ZBBXA8MT70 800 aa9.59□□□□□ -0.87
CHFR-211ENST00000535897 ATP2A1O14983 1001 aa9.59□□□□□ -0.87
CHFR-211ENST00000535897 CCL23P55773 120 aa9.59□□□□□ -0.87
CHFR-211ENST00000535897 CNTN2Q02246 1040 aa9.59□□□□□ -0.87
CHFR-211ENST00000535897 SBK1Q52WX2 424 aa9.59□□□□□ -0.87
CHFR-211ENST00000535897 RASIP1Q5U651 963 aa9.59□□□□□ -0.87
CHFR-211ENST00000535897 PPP2R2DQ66LE6 453 aa9.59□□□□□ -0.87
CHFR-211ENST00000535897 SIRT2Q8IXJ6 389 aa9.59□□□□□ -0.87
CHFR-211ENST00000535897 CHMP4CQ96CF2 233 aa9.59□□□□□ -0.87
CHFR-211ENST00000535897 STRBPQ96SI9 672 aaKnown RBP9.59□□□□□ -0.87
CHFR-211ENST00000535897 ACAD9Q9H845 621 aa9.59□□□□□ -0.87
CHFR-211ENST00000535897 CXXC1Q9P0U4 656 aaPredicted RBP9.59□□□□□ -0.87
CHFR-211ENST00000535897 RAPGEFL1Q9UHV5 662 aa9.59□□□□□ -0.87
CHFR-211ENST00000535897 DDX19BQ9UMR2 479 aa9.59□□□□□ -0.87
CHFR-211ENST00000535897 COG6Q9Y2V7 657 aa9.59□□□□□ -0.87
CHFR-211ENST00000535897 UMODL1Q5DID0 1318 aa9.58□□□□□ -0.88
CHFR-211ENST00000535897 CHD7Q9P2D1 2997 aa9.58□□□□□ -0.88
CHFR-211ENST00000535897 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.58□□□□□ -0.88
CHFR-211ENST00000535897 GSG1L2A8MUP6 293 aa9.58□□□□□ -0.88
CHFR-211ENST00000535897 ZEB2O60315 1214 aa9.58□□□□□ -0.88
CHFR-211ENST00000535897 CABYRO75952 493 aa9.58□□□□□ -0.88
CHFR-211ENST00000535897 TTLL1O95922 423 aa9.58□□□□□ -0.88
CHFR-211ENST00000535897 BMP3P12645 472 aa9.58□□□□□ -0.88
CHFR-211ENST00000535897 OAZ1P54368 228 aa9.58□□□□□ -0.88
CHFR-211ENST00000535897 ITGA7Q13683 1181 aa9.58□□□□□ -0.88
CHFR-211ENST00000535897 ADGRE1Q14246 886 aa9.58□□□□□ -0.88
CHFR-211ENST00000535897 SKIV2LQ15477 1246 aaKnown RBP9.58□□□□□ -0.88
CHFR-211ENST00000535897 FSCN1Q16658 493 aaKnown RBP9.58□□□□□ -0.88
CHFR-211ENST00000535897 SLFN13Q68D06 897 aa9.58□□□□□ -0.88
CHFR-211ENST00000535897 TLK2Q86UE8 772 aa9.58□□□□□ -0.88
CHFR-211ENST00000535897 HERVK_113Q902F9 699 aa9.58□□□□□ -0.88
CHFR-211ENST00000535897 CEP95Q96GE4 821 aa9.58□□□□□ -0.88
CHFR-211ENST00000535897 FGD4Q96M96 766 aa9.58□□□□□ -0.88
CHFR-211ENST00000535897 LRRCC1Q9C099 1032 aa9.58□□□□□ -0.88
CHFR-211ENST00000535897 TRPV6Q9H1D0 765 aa9.58□□□□□ -0.88
CHFR-211ENST00000535897 RNF146Q9NTX7 359 aa9.58□□□□□ -0.88
CHFR-211ENST00000535897 SLC4A7Q9Y6M7 1214 aa9.58□□□□□ -0.88
CHFR-211ENST00000535897 TRANK1O15050 2925 aa9.58□□□□□ -0.88
CHFR-211ENST00000535897 ASB14A6NK59 587 aa9.57□□□□□ -0.88
CHFR-211ENST00000535897 TMEM232C9JQI7 657 aa9.57□□□□□ -0.88
CHFR-211ENST00000535897 DYNC1LI2O43237 492 aaPredicted RBP9.57□□□□□ -0.88
CHFR-211ENST00000535897 SMARCA5O60264 1052 aaPredicted RBP9.57□□□□□ -0.88
CHFR-211ENST00000535897 CD4P01730 458 aa9.57□□□□□ -0.88
CHFR-211ENST00000535897 TSPY3P0CV98 308 aa9.57□□□□□ -0.88
CHFR-211ENST00000535897 TSPY8P0CW00 308 aa9.57□□□□□ -0.88
CHFR-211ENST00000535897 ALAS1P13196 640 aa9.57□□□□□ -0.88
CHFR-211ENST00000535897 STAT2P52630 851 aa9.57□□□□□ -0.88
CHFR-211ENST00000535897 RABGGTBP53611 331 aa9.57□□□□□ -0.88
CHFR-211ENST00000535897 GIMAP6Q6P9H5 292 aa9.57□□□□□ -0.88
CHFR-211ENST00000535897 EEPD1Q7L9B9 569 aa9.57□□□□□ -0.88
CHFR-211ENST00000535897 GMCL1P1Q8NEA9 526 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms