RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 DIS3LQ8TF46 1054 aaKnown RBP10.46□□□□□ -0.73
CHD4-204ENST00000535810 GMCL1Q96IK5 515 aa10.46□□□□□ -0.73
CHD4-204ENST00000535810 TOMM22Q9NS69 142 aa10.46□□□□□ -0.73
CHD4-204ENST00000535810 FEM1BQ9UK73 627 aa10.46□□□□□ -0.73
CHD4-204ENST00000535810 OGDHLQ9ULD0 1010 aa10.46□□□□□ -0.73
CHD4-204ENST00000535810 NEDD4P46934 1319 aa10.45□□□□□ -0.74
CHD4-204ENST00000535810 SOX1O00570 391 aaPredicted RBP10.45□□□□□ -0.74
CHD4-204ENST00000535810 ATP2A1O14983 1001 aa10.45□□□□□ -0.74
CHD4-204ENST00000535810 PCP11498 1178 aaKnown RBP10.45□□□□□ -0.74
CHD4-204ENST00000535810 FCER1AP12319 257 aa10.45□□□□□ -0.74
CHD4-204ENST00000535810 BMP3P12645 472 aa10.45□□□□□ -0.74
CHD4-204ENST00000535810 COPB2P35606 906 aa10.45□□□□□ -0.74
CHD4-204ENST00000535810 SLC1A4P43007 532 aa10.45□□□□□ -0.74
CHD4-204ENST00000535810 RRP12Q5JTH9 1297 aaKnown RBP10.45□□□□□ -0.74
CHD4-204ENST00000535810 AKNAD1Q5T1N1 836 aa10.45□□□□□ -0.74
CHD4-204ENST00000535810 LHX8Q68G74 356 aa10.45□□□□□ -0.74
CHD4-204ENST00000535810 SNRNP48Q6IEG0 339 aaKnown RBP10.45□□□□□ -0.74
CHD4-204ENST00000535810 RASGRP2Q7LDG7 609 aa10.45□□□□□ -0.74
CHD4-204ENST00000535810 TRPV1Q8NER1 839 aa10.45□□□□□ -0.74
CHD4-204ENST00000535810 KCNV2Q8TDN2 545 aa10.45□□□□□ -0.74
CHD4-204ENST00000535810 STAG1Q8WVM7 1258 aa10.45□□□□□ -0.74
CHD4-204ENST00000535810 KIFC2Q96AC6 838 aa10.45□□□□□ -0.74
CHD4-204ENST00000535810 PAWRQ96IZ0 340 aaKnown RBP10.45□□□□□ -0.74
CHD4-204ENST00000535810 DCBLD2Q96PD2 775 aa10.45□□□□□ -0.74
CHD4-204ENST00000535810 MMP19Q99542 508 aa10.45□□□□□ -0.74
CHD4-204ENST00000535810 LARP6Q9BRS8 491 aaKnown RBP10.45□□□□□ -0.74
CHD4-204ENST00000535810 COL25A1Q9BXS0 654 aaPredicted RBP10.45□□□□□ -0.74
CHD4-204ENST00000535810 IL25Q9H293 177 aa10.45□□□□□ -0.74
CHD4-204ENST00000535810 SLC38A10Q9HBR0 1119 aa10.45□□□□□ -0.74
CHD4-204ENST00000535810 STXBP5LQ9Y2K9 1186 aa10.45□□□□□ -0.74
CHD4-204ENST00000535810 RIPK3Q9Y572 518 aa10.45□□□□□ -0.74
CHD4-204ENST00000535810 SPTBN5Q9NRC6 3674 aaKnown RBP10.45□□□□□ -0.74
CHD4-204ENST00000535810 LAMA4Q16363 1823 aa10.44□□□□□ -0.74
CHD4-204ENST00000535810 TMEM232C9JQI7 657 aa10.44□□□□□ -0.74
CHD4-204ENST00000535810 ZBED4O75132 1171 aa10.44□□□□□ -0.74
CHD4-204ENST00000535810 PGK2P07205 417 aa10.44□□□□□ -0.74
CHD4-204ENST00000535810 CYBAP13498 195 aa10.44□□□□□ -0.74
CHD4-204ENST00000535810 MCCP23508 829 aa10.44□□□□□ -0.74
CHD4-204ENST00000535810 STAT2P52630 851 aa10.44□□□□□ -0.74
CHD4-204ENST00000535810 KCTD2Q14681 263 aa10.44□□□□□ -0.74
CHD4-204ENST00000535810 MFSD6Q6ZSS7 791 aa10.44□□□□□ -0.74
CHD4-204ENST00000535810 NECAB2Q7Z6G3 386 aa10.44□□□□□ -0.74
CHD4-204ENST00000535810 PDCD7Q8N8D1 485 aaKnown RBP10.44□□□□□ -0.74
CHD4-204ENST00000535810 CHMP4CQ96CF2 233 aa10.44□□□□□ -0.74
CHD4-204ENST00000535810 LRCH3Q96II8 777 aa10.44□□□□□ -0.74
CHD4-204ENST00000535810 MAML3Q96JK9 1138 aa10.44□□□□□ -0.74
CHD4-204ENST00000535810 DSCC1Q9BVC3 393 aa10.44□□□□□ -0.74
CHD4-204ENST00000535810 RNF41Q9H4P4 317 aaPredicted RBP10.44□□□□□ -0.74
CHD4-204ENST00000535810 TCP11L1Q9NUJ3 509 aa10.44□□□□□ -0.74
CHD4-204ENST00000535810 SLC5A4Q9NY91 659 aa10.44□□□□□ -0.74
CHD4-204ENST00000535810 ISY1Q9ULR0 285 aaKnown RBP10.44□□□□□ -0.74
CHD4-204ENST00000535810 RAD50Q92878 1312 aa10.43□□□□□ -0.74
CHD4-204ENST00000535810 ZNF213O14771 459 aa10.43□□□□□ -0.74
CHD4-204ENST00000535810 OAZ1P54368 228 aa10.43□□□□□ -0.74
CHD4-204ENST00000535810 IRX5P78411 483 aaPredicted RBP10.43□□□□□ -0.74
CHD4-204ENST00000535810 ZNF792Q3KQV3 632 aa10.43□□□□□ -0.74
CHD4-204ENST00000535810 KCTD1Q719H9 257 aa10.43□□□□□ -0.74
CHD4-204ENST00000535810 FAM160B2Q86V87 743 aa10.43□□□□□ -0.74
CHD4-204ENST00000535810 CPXCR1Q8N123 301 aa10.43□□□□□ -0.74
CHD4-204ENST00000535810 TMEM47Q9BQJ4 181 aa10.43□□□□□ -0.74
CHD4-204ENST00000535810 RAVER2Q9HCJ3 691 aaKnown RBP10.43□□□□□ -0.74
CHD4-204ENST00000535810 DDX20Q9UHI6 824 aaKnown RBP10.43□□□□□ -0.74
CHD4-204ENST00000535810 FRMPD3Q5JV73 1810 aa10.42□□□□□ -0.74
CHD4-204ENST00000535810 PFASO15067 1338 aa10.42□□□□□ -0.74
CHD4-204ENST00000535810 ZNF536O15090 1300 aa10.42□□□□□ -0.74
CHD4-204ENST00000535810 MSCO60682 206 aa10.42□□□□□ -0.74
CHD4-204ENST00000535810 PLA2G6O60733 806 aa10.42□□□□□ -0.74
CHD4-204ENST00000535810 FDX1P10109 184 aa10.42□□□□□ -0.74
CHD4-204ENST00000535810 TOP1P11387 765 aaKnown RBP10.42□□□□□ -0.74
CHD4-204ENST00000535810 COL6A1P12109 1028 aa10.42□□□□□ -0.74
CHD4-204ENST00000535810 CNGA1P29973 690 aa10.42□□□□□ -0.74
CHD4-204ENST00000535810 IKQ13123 557 aaPredicted RBP10.42□□□□□ -0.74
CHD4-204ENST00000535810 RCSD1Q6JBY9 416 aa10.42□□□□□ -0.74
CHD4-204ENST00000535810 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.42□□□□□ -0.74
CHD4-204ENST00000535810 CHURC1Q8WUH1 139 aa10.42□□□□□ -0.74
CHD4-204ENST00000535810 DCAF4Q8WV16 495 aa10.42□□□□□ -0.74
CHD4-204ENST00000535810 ESR2Q92731 530 aa10.42□□□□□ -0.74
CHD4-204ENST00000535810 C11orf49Q9H6J7 331 aa10.42□□□□□ -0.74
CHD4-204ENST00000535810 MTMR7Q9Y216 660 aa10.42□□□□□ -0.74
CHD4-204ENST00000535810 DIS3Q9Y2L1 958 aaKnown RBP10.42□□□□□ -0.74
CHD4-204ENST00000535810 CTDP1Q9Y5B0 961 aaPredicted RBP10.42□□□□□ -0.74
CHD4-204ENST00000535810 ALPK3Q96L96 1907 aa10.41□□□□□ -0.74
CHD4-204ENST00000535810 ZNFX1Q9P2E3 1918 aaKnown RBP10.41□□□□□ -0.74
CHD4-204ENST00000535810 DNAJC25-GNG10A0A024R161 153 aa10.41□□□□□ -0.74
CHD4-204ENST00000535810 SEPT4O43236 478 aa10.41□□□□□ -0.74
CHD4-204ENST00000535810 EVI5O60447 810 aa10.41□□□□□ -0.74
CHD4-204ENST00000535810 CHMLP26374 656 aa10.41□□□□□ -0.74
CHD4-204ENST00000535810 SLC4A3P48751 1232 aa10.41□□□□□ -0.74
CHD4-204ENST00000535810 NT5C2P49902 561 aa10.41□□□□□ -0.74
CHD4-204ENST00000535810 IMMTQ16891 758 aaKnown RBP10.41□□□□□ -0.74
CHD4-204ENST00000535810 CCDC96Q2M329 555 aa10.41□□□□□ -0.74
CHD4-204ENST00000535810 PRAMEF19Q5SWL8 479 aa10.41□□□□□ -0.74
CHD4-204ENST00000535810 DEFB123Q8N688 67 aa10.41□□□□□ -0.74
CHD4-204ENST00000535810 CHST13Q8NET6 341 aa10.41□□□□□ -0.74
CHD4-204ENST00000535810 TINF2Q9BSI4 451 aa10.41□□□□□ -0.74
CHD4-204ENST00000535810 OCEL1Q9H607 264 aa10.41□□□□□ -0.74
CHD4-204ENST00000535810 HOMER2Q9NSB8 354 aa10.41□□□□□ -0.74
CHD4-204ENST00000535810 FBXO40Q9UH90 709 aa10.41□□□□□ -0.74
CHD4-204ENST00000535810 NRBP1Q9UHY1 535 aa10.41□□□□□ -0.74
CHD4-204ENST00000535810 CTNNA3Q9UI47 895 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms