RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 FAM83BQ5T0W9 1011 aa11.99□□□□□ -0.49
CLSTN3-203ENST00000534830 ALYREFQ86V81 257 aaKnown RBP11.99□□□□□ -0.49
CLSTN3-203ENST00000534830 NCAPG2Q86XI2 1143 aa11.99□□□□□ -0.49
CLSTN3-203ENST00000534830 TICAM2Q86XR7 235 aa11.99□□□□□ -0.49
CLSTN3-203ENST00000534830 ZNF444Q8N0Y2 327 aaPredicted RBP11.99□□□□□ -0.49
CLSTN3-203ENST00000534830 EVI5LQ96CN4 794 aa11.99□□□□□ -0.49
CLSTN3-203ENST00000534830 CEP95Q96GE4 821 aa11.99□□□□□ -0.49
CLSTN3-203ENST00000534830 ZNF287Q9HBT7 754 aa11.99□□□□□ -0.49
CLSTN3-203ENST00000534830 XIRP2A4UGR9 3374 aa11.98□□□□□ -0.49
CLSTN3-203ENST00000534830 PRDM1O75626 825 aa11.98□□□□□ -0.49
CLSTN3-203ENST00000534830 NDUFB10O96000 172 aa11.98□□□□□ -0.49
CLSTN3-203ENST00000534830 APPP05067 770 aa11.98□□□□□ -0.49
CLSTN3-203ENST00000534830 ACRP10323 421 aa11.98□□□□□ -0.49
CLSTN3-203ENST00000534830 STAT3P40763 770 aa11.98□□□□□ -0.49
CLSTN3-203ENST00000534830 KCNQ1P51787 676 aa11.98□□□□□ -0.49
CLSTN3-203ENST00000534830 PPARAQ07869 468 aa11.98□□□□□ -0.49
CLSTN3-203ENST00000534830 RAB30Q15771 203 aa11.98□□□□□ -0.49
CLSTN3-203ENST00000534830 MFSD5Q6N075 450 aa11.98□□□□□ -0.49
CLSTN3-203ENST00000534830 ANKRD33Q7Z3H0 272 aa11.98□□□□□ -0.49
CLSTN3-203ENST00000534830 SMC5Q8IY18 1101 aa11.98□□□□□ -0.49
CLSTN3-203ENST00000534830 GMCL1P1Q8NEA9 526 aa11.98□□□□□ -0.49
CLSTN3-203ENST00000534830 NEDD1Q8NHV4 660 aa11.98□□□□□ -0.49
CLSTN3-203ENST00000534830 MAML3Q96JK9 1138 aa11.98□□□□□ -0.49
CLSTN3-203ENST00000534830 TOX2Q96NM4 488 aa11.98□□□□□ -0.49
CLSTN3-203ENST00000534830 NACAP1Q9BZK3 213 aa11.98□□□□□ -0.49
CLSTN3-203ENST00000534830 NKX2-4Q9H2Z4 354 aa11.98□□□□□ -0.49
CLSTN3-203ENST00000534830 SLC28A3Q9HAS3 691 aa11.98□□□□□ -0.49
CLSTN3-203ENST00000534830 STARD7Q9NQZ5 370 aa11.98□□□□□ -0.49
CLSTN3-203ENST00000534830 CLIP2Q9UDT6 1046 aa11.98□□□□□ -0.49
CLSTN3-203ENST00000534830 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.98□□□□□ -0.49
CLSTN3-203ENST00000534830 PIEZO1Q92508 2521 aa11.98□□□□□ -0.49
CLSTN3-203ENST00000534830 MUC6Q6W4X9 2439 aa11.97□□□□□ -0.49
CLSTN3-203ENST00000534830 ATP2A1O14983 1001 aa11.97□□□□□ -0.49
CLSTN3-203ENST00000534830 TTLL1O95922 423 aa11.97□□□□□ -0.49
CLSTN3-203ENST00000534830 FGRP09769 529 aa11.97□□□□□ -0.49
CLSTN3-203ENST00000534830 FCER1AP12319 257 aa11.97□□□□□ -0.49
CLSTN3-203ENST00000534830 CSF2RAP15509 400 aa11.97□□□□□ -0.49
CLSTN3-203ENST00000534830 NOVP48745 357 aa11.97□□□□□ -0.49
CLSTN3-203ENST00000534830 PDE4BQ07343 736 aa11.97□□□□□ -0.49
CLSTN3-203ENST00000534830 ALX1Q15699 326 aa11.97□□□□□ -0.49
CLSTN3-203ENST00000534830 ZNF792Q3KQV3 632 aa11.97□□□□□ -0.49
CLSTN3-203ENST00000534830 ZNF365Q70YC5 407 aa11.97□□□□□ -0.49
CLSTN3-203ENST00000534830 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.97□□□□□ -0.49
CLSTN3-203ENST00000534830 C16orf59Q7L2K0 433 aa11.97□□□□□ -0.49
CLSTN3-203ENST00000534830 PRPF38AQ8NAV1 312 aaKnown RBP11.97□□□□□ -0.49
CLSTN3-203ENST00000534830 NUP133Q8WUM0 1156 aa11.97□□□□□ -0.49
CLSTN3-203ENST00000534830 NUP88Q99567 741 aaPredicted RBP11.97□□□□□ -0.49
CLSTN3-203ENST00000534830 SLF1Q9BQI6 1058 aa11.97□□□□□ -0.49
CLSTN3-203ENST00000534830 NAPBQ9H115 298 aa11.97□□□□□ -0.49
CLSTN3-203ENST00000534830 HELLSQ9NRZ9 838 aa11.97□□□□□ -0.49
CLSTN3-203ENST00000534830 ANAPC4Q9UJX5 808 aa11.97□□□□□ -0.49
CLSTN3-203ENST00000534830 DIS3Q9Y2L1 958 aaKnown RBP11.97□□□□□ -0.49
CLSTN3-203ENST00000534830 CHD9Q3L8U1 2897 aa11.97□□□□□ -0.49
CLSTN3-203ENST00000534830 REV3LO60673 3130 aa11.96□□□□□ -0.49
CLSTN3-203ENST00000534830 GBF1Q92538 1859 aa11.96□□□□□ -0.49
CLSTN3-203ENST00000534830 COPB2P35606 906 aa11.96□□□□□ -0.49
CLSTN3-203ENST00000534830 ACLYP53396 1101 aa11.96□□□□□ -0.49
CLSTN3-203ENST00000534830 RASIP1Q5U651 963 aa11.96□□□□□ -0.49
CLSTN3-203ENST00000534830 VPS53Q5VIR6 699 aa11.96□□□□□ -0.49
CLSTN3-203ENST00000534830 PSRC1Q6PGN9 363 aaPredicted RBP11.96□□□□□ -0.49
CLSTN3-203ENST00000534830 TMEM199Q8N511 208 aa11.96□□□□□ -0.49
CLSTN3-203ENST00000534830 LENG1Q96BZ8 264 aaPredicted RBP11.96□□□□□ -0.49
CLSTN3-203ENST00000534830 SNX27Q96L92 541 aa11.96□□□□□ -0.49
CLSTN3-203ENST00000534830 MMP19Q99542 508 aa11.96□□□□□ -0.49
CLSTN3-203ENST00000534830 TBX21Q9UL17 535 aa11.96□□□□□ -0.49
CLSTN3-203ENST00000534830 RIPK3Q9Y572 518 aa11.96□□□□□ -0.49
CLSTN3-203ENST00000534830 CHD7Q9P2D1 2997 aa11.95□□□□□ -0.5
CLSTN3-203ENST00000534830 DNAJC25-GNG10A0A024R161 153 aa11.95□□□□□ -0.5
CLSTN3-203ENST00000534830 FAM86C2PA6NEL3 165 aa11.95□□□□□ -0.5
CLSTN3-203ENST00000534830 IGHDP01880 384 aa11.95□□□□□ -0.5
CLSTN3-203ENST00000534830 TAL1P17542 331 aaPredicted RBP11.95□□□□□ -0.5
CLSTN3-203ENST00000534830 TFAP4Q01664 338 aa11.95□□□□□ -0.5
CLSTN3-203ENST00000534830 SAMD1Q6SPF0 538 aaPredicted RBP11.95□□□□□ -0.5
CLSTN3-203ENST00000534830 VTI1AQ96AJ9 217 aa11.95□□□□□ -0.5
CLSTN3-203ENST00000534830 TSEN34Q9BSV6 310 aaKnown RBP11.95□□□□□ -0.5
CLSTN3-203ENST00000534830 PPP1R12CQ9BZL4 782 aa11.95□□□□□ -0.5
CLSTN3-203ENST00000534830 MTIF3Q9H2K0 278 aaKnown RBP11.95□□□□□ -0.5
CLSTN3-203ENST00000534830 OSBPL3Q9H4L5 887 aa11.95□□□□□ -0.5
CLSTN3-203ENST00000534830 SLC38A10Q9HBR0 1119 aa11.95□□□□□ -0.5
CLSTN3-203ENST00000534830 INCENPQ9NQS7 918 aa11.95□□□□□ -0.5
CLSTN3-203ENST00000534830 IL17RBQ9NRM6 502 aa11.95□□□□□ -0.5
CLSTN3-203ENST00000534830 NRBP1Q9UHY1 535 aa11.95□□□□□ -0.5
CLSTN3-203ENST00000534830 FEM1BQ9UK73 627 aa11.95□□□□□ -0.5
CLSTN3-203ENST00000534830 MCM3APO60318 1980 aa11.95□□□□□ -0.5
CLSTN3-203ENST00000534830 MROH7Q68CQ1 1323 aa11.94□□□□□ -0.5
CLSTN3-203ENST00000534830 A0A0D9SFI3 127 aa11.94□□□□□ -0.5
CLSTN3-203ENST00000534830 RAD21O60216 631 aa11.94□□□□□ -0.5
CLSTN3-203ENST00000534830 PLA2G6O60733 806 aa11.94□□□□□ -0.5
CLSTN3-203ENST00000534830 PGK2P07205 417 aa11.94□□□□□ -0.5
CLSTN3-203ENST00000534830 SLC3A2P08195 630 aaKnown RBP11.94□□□□□ -0.5
CLSTN3-203ENST00000534830 TSPY3P0CV98 308 aa11.94□□□□□ -0.5
CLSTN3-203ENST00000534830 TSPY8P0CW00 308 aa11.94□□□□□ -0.5
CLSTN3-203ENST00000534830 AKR1A1P14550 325 aa11.94□□□□□ -0.5
CLSTN3-203ENST00000534830 CTDSPL2Q05D32 466 aa11.94□□□□□ -0.5
CLSTN3-203ENST00000534830 MCMDC2Q4G0Z9 681 aa11.94□□□□□ -0.5
CLSTN3-203ENST00000534830 PPP2R2DQ66LE6 453 aa11.94□□□□□ -0.5
CLSTN3-203ENST00000534830 SLFN13Q68D06 897 aa11.94□□□□□ -0.5
CLSTN3-203ENST00000534830 PLEKHM2Q8IWE5 1019 aa11.94□□□□□ -0.5
CLSTN3-203ENST00000534830 LRRC47Q8N1G4 583 aaKnown RBP11.94□□□□□ -0.5
CLSTN3-203ENST00000534830 FAM227BQ96M60 508 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms