RNA–Protein interactions for RNA: ENST00000534374.1

YIF1A-213, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-213ENST00000534374 DNAH12Q6ZR08 3092 aa27.43■■□□□ 1.98
YIF1A-213ENST00000534374 GJC2Q5T442 439 aaPredicted RBP27.43■■□□□ 1.98
YIF1A-213ENST00000534374 ANO1Q5XXA6 986 aa27.43■■□□□ 1.98
YIF1A-213ENST00000534374 CHMP4CQ96CF2 233 aa27.43■■□□□ 1.98
YIF1A-213ENST00000534374 AGBL1Q96MI9 1066 aa27.43■■□□□ 1.98
YIF1A-213ENST00000534374 ACAD9Q9H845 621 aa27.43■■□□□ 1.98
YIF1A-213ENST00000534374 KBTBD13C9JR72 458 aa27.42■■□□□ 1.98
YIF1A-213ENST00000534374 SNAI1O95863 264 aaPredicted RBP27.42■■□□□ 1.98
YIF1A-213ENST00000534374 RARBP10826 455 aa27.42■■□□□ 1.98
YIF1A-213ENST00000534374 CCDC178Q5BJE1 867 aa27.42■■□□□ 1.98
YIF1A-213ENST00000534374 AKR1A1P14550 325 aa27.41■■□□□ 1.98
YIF1A-213ENST00000534374 TAL1P17542 331 aaPredicted RBP27.41■■□□□ 1.98
YIF1A-213ENST00000534374 BMP8BP34820 402 aa27.41■■□□□ 1.98
YIF1A-213ENST00000534374 LRRC41Q15345 812 aa27.41■■□□□ 1.98
YIF1A-213ENST00000534374 CCDC96Q2M329 555 aa27.41■■□□□ 1.98
YIF1A-213ENST00000534374 DGKHQ86XP1 1220 aa27.41■■□□□ 1.98
YIF1A-213ENST00000534374 TRERF1Q96PN7 1200 aa27.41■■□□□ 1.98
YIF1A-213ENST00000534374 GDF15Q99988 308 aa27.41■■□□□ 1.98
YIF1A-213ENST00000534374 ZMYND8Q9ULU4 1186 aaPredicted RBP27.41■■□□□ 1.98
YIF1A-213ENST00000534374 MTMR7Q9Y216 660 aa27.41■■□□□ 1.98
YIF1A-213ENST00000534374 GSPT1P15170 499 aaKnown RBP27.4■■□□□ 1.98
YIF1A-213ENST00000534374 IMMTQ16891 758 aaKnown RBP27.4■■□□□ 1.98
YIF1A-213ENST00000534374 HOMER2Q9NSB8 354 aa27.4■■□□□ 1.98
YIF1A-213ENST00000534374 RNF146Q9NTX7 359 aa27.4■■□□□ 1.98
YIF1A-213ENST00000534374 PDHBP11177 359 aa27.39■■□□□ 1.98
YIF1A-213ENST00000534374 TTBK2Q6IQ55 1244 aa27.39■■□□□ 1.98
YIF1A-213ENST00000534374 RASGRP2Q7LDG7 609 aa27.39■■□□□ 1.98
YIF1A-213ENST00000534374 RANBP17Q9H2T7 1088 aaKnown RBP27.39■■□□□ 1.98
YIF1A-213ENST00000534374 ABHD16BQ9H3Z7 469 aa27.39■■□□□ 1.98
YIF1A-213ENST00000534374 XPNPEP3Q9NQH7 507 aa27.39■■□□□ 1.98
YIF1A-213ENST00000534374 FAM184BQ9ULE4 1060 aa27.39■■□□□ 1.98
YIF1A-213ENST00000534374 POTEB2H3BUK9 544 aa27.38■■□□□ 1.97
YIF1A-213ENST00000534374 ICAM1P05362 532 aa27.38■■□□□ 1.97
YIF1A-213ENST00000534374 SNHG28P0DPA3 235 aa27.38■■□□□ 1.97
YIF1A-213ENST00000534374 ALAS1P13196 640 aa27.38■■□□□ 1.97
YIF1A-213ENST00000534374 CCDC174Q6PII3 467 aa27.38■■□□□ 1.97
YIF1A-213ENST00000534374 IQCA1Q86XH1 822 aa27.38■■□□□ 1.97
YIF1A-213ENST00000534374 FAM133AQ8N9E0 248 aa27.38■■□□□ 1.97
YIF1A-213ENST00000534374 ANKS1AQ92625 1134 aa27.38■■□□□ 1.97
YIF1A-213ENST00000534374 FGD4Q96M96 766 aa27.38■■□□□ 1.97
YIF1A-213ENST00000534374 A1CFQ9NQ94 594 aaKnown RBP27.38■■□□□ 1.97
YIF1A-213ENST00000534374 NEDD4P46934 1319 aa27.38■■□□□ 1.97
YIF1A-213ENST00000534374 SYN1P17600 705 aa27.37■■□□□ 1.97
YIF1A-213ENST00000534374 ACVR2BQ13705 512 aa27.37■■□□□ 1.97
YIF1A-213ENST00000534374 SYDE2Q5VT97 1194 aa27.37■■□□□ 1.97
YIF1A-213ENST00000534374 SLC39A5Q6ZMH5 540 aa27.37■■□□□ 1.97
YIF1A-213ENST00000534374 RNF180Q86T96 592 aa27.37■■□□□ 1.97
YIF1A-213ENST00000534374 RUFY2Q8WXA3 655 aa27.37■■□□□ 1.97
YIF1A-213ENST00000534374 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.37■■□□□ 1.97
YIF1A-213ENST00000534374 PNMA2Q9UL42 364 aa27.37■■□□□ 1.97
YIF1A-213ENST00000534374 KDM4AO75164 1064 aa27.36■■□□□ 1.97
YIF1A-213ENST00000534374 SLC16A2P36021 539 aa27.36■■□□□ 1.97
YIF1A-213ENST00000534374 ATN1P54259 1190 aaPredicted RBP27.36■■□□□ 1.97
YIF1A-213ENST00000534374 SNAP25P60880 206 aa27.36■■□□□ 1.97
YIF1A-213ENST00000534374 ZNF543Q08ER8 600 aa27.36■■□□□ 1.97
YIF1A-213ENST00000534374 GPCPD1Q9NPB8 672 aa27.36■■□□□ 1.97
YIF1A-213ENST00000534374 CCPG1Q9ULG6 757 aa27.36■■□□□ 1.97
YIF1A-213ENST00000534374 RAD50Q92878 1312 aa27.36■■□□□ 1.97
YIF1A-213ENST00000534374 MYCNP04198 464 aaPredicted RBP27.35■■□□□ 1.97
YIF1A-213ENST00000534374 ADCYAP1R1P41586 468 aa27.35■■□□□ 1.97
YIF1A-213ENST00000534374 CNTN2Q02246 1040 aa27.35■■□□□ 1.97
YIF1A-213ENST00000534374 C1orf53Q5VUE5 145 aa27.35■■□□□ 1.97
YIF1A-213ENST00000534374 KRT23Q9C075 422 aa27.35■■□□□ 1.97
YIF1A-213ENST00000534374 IL25Q9H293 177 aa27.35■■□□□ 1.97
YIF1A-213ENST00000534374 CNNM2Q9H8M5 875 aa27.35■■□□□ 1.97
YIF1A-213ENST00000534374 ZSWIM5Q9P217 1185 aa27.35■■□□□ 1.97
YIF1A-213ENST00000534374 PHF24Q9UPV7 400 aa27.35■■□□□ 1.97
YIF1A-213ENST00000534374 DUSP11O75319 330 aaKnown RBP27.34■■□□□ 1.97
YIF1A-213ENST00000534374 CHMLP26374 656 aa27.34■■□□□ 1.97
YIF1A-213ENST00000534374 SNX17Q15036 470 aa27.34■■□□□ 1.97
YIF1A-213ENST00000534374 GPATCH4Q5T3I0 446 aaKnown RBP27.34■■□□□ 1.97
YIF1A-213ENST00000534374 ARMCX2Q7L311 632 aa27.34■■□□□ 1.97
YIF1A-213ENST00000534374 ZKSCAN3Q9BRR0 538 aa27.34■■□□□ 1.97
YIF1A-213ENST00000534374 TSEN34Q9BSV6 310 aaKnown RBP27.34■■□□□ 1.97
YIF1A-213ENST00000534374 ZHX1Q9UKY1 873 aaPredicted RBP27.34■■□□□ 1.97
YIF1A-213ENST00000534374 FRMPD2Q68DX3 1309 aaPredicted RBP27.34■■□□□ 1.97
YIF1A-213ENST00000534374 LAMA3Q16787 3333 aa27.33■■□□□ 1.97
YIF1A-213ENST00000534374 ASB14A6NK59 587 aa27.33■■□□□ 1.97
YIF1A-213ENST00000534374 B4E1Z4 1266 aa27.33■■□□□ 1.97
YIF1A-213ENST00000534374 PGK1P00558 417 aa27.33■■□□□ 1.97
YIF1A-213ENST00000534374 MAGEA10P43363 369 aaPredicted RBP27.33■■□□□ 1.97
YIF1A-213ENST00000534374 RTP1P59025 263 aa27.33■■□□□ 1.97
YIF1A-213ENST00000534374 MUM1L1Q5H9M0 696 aa27.33■■□□□ 1.97
YIF1A-213ENST00000534374 CCDC144CPQ8IYA2 1237 aa27.33■■□□□ 1.97
YIF1A-213ENST00000534374 ZSCAN10Q96SZ4 725 aaPredicted RBP27.33■■□□□ 1.97
YIF1A-213ENST00000534374 CYP39A1Q9NYL5 469 aa27.33■■□□□ 1.97
YIF1A-213ENST00000534374 SZT2Q5T011 3432 aa27.33■■□□□ 1.97
YIF1A-213ENST00000534374 MCM3APO60318 1980 aa27.33■■□□□ 1.97
YIF1A-213ENST00000534374 SOWAHBA6NEL2 793 aa27.32■■□□□ 1.96
YIF1A-213ENST00000534374 ADAMTS4O75173 837 aa27.32■■□□□ 1.96
YIF1A-213ENST00000534374 LAMA4Q16363 1823 aa27.32■■□□□ 1.96
YIF1A-213ENST00000534374 CCDC144BQ3MJ40 725 aa27.31■■□□□ 1.96
YIF1A-213ENST00000534374 PNMA1Q8ND90 353 aa27.31■■□□□ 1.96
YIF1A-213ENST00000534374 KLHDC9Q8NEP7 349 aa27.31■■□□□ 1.96
YIF1A-213ENST00000534374 KATNBL1Q9H079 304 aa27.31■■□□□ 1.96
YIF1A-213ENST00000534374 FERMT2Q96AC1 680 aa27.3■■□□□ 1.96
YIF1A-213ENST00000534374 KAT14Q9H8E8 782 aa27.3■■□□□ 1.96
YIF1A-213ENST00000534374 NSMFQ6X4W1 530 aa27.29■■□□□ 1.96
YIF1A-213ENST00000534374 ENAHQ8N8S7 591 aaPredicted RBP27.29■■□□□ 1.96
YIF1A-213ENST00000534374 PRKAG2Q9UGJ0 569 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms