RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 ANO1Q5XXA6 986 aa15.8■□□□□ 0.12
CAPN1-228ENST00000534373 BTNL9Q6UXG8 535 aa15.8■□□□□ 0.12
CAPN1-228ENST00000534373 SLC39A5Q6ZMH5 540 aa15.8■□□□□ 0.12
CAPN1-228ENST00000534373 KCTD1Q719H9 257 aa15.8■□□□□ 0.12
CAPN1-228ENST00000534373 ABHD16BQ9H3Z7 469 aa15.8■□□□□ 0.12
CAPN1-228ENST00000534373 DIAPH3Q9NSV4 1193 aa15.8■□□□□ 0.12
CAPN1-228ENST00000534373 PRR12Q9ULL5 1215 aa15.8■□□□□ 0.12
CAPN1-228ENST00000534373 PLXNA1Q9UIW2 1896 aa15.8■□□□□ 0.12
CAPN1-228ENST00000534373 TAL1P17542 331 aaPredicted RBP15.79■□□□□ 0.12
CAPN1-228ENST00000534373 ATN1P54259 1190 aaPredicted RBP15.79■□□□□ 0.12
CAPN1-228ENST00000534373 SNX17Q15036 470 aa15.79■□□□□ 0.12
CAPN1-228ENST00000534373 CCDC178Q5BJE1 867 aa15.79■□□□□ 0.12
CAPN1-228ENST00000534373 CWC27Q6UX04 472 aaKnown RBP15.79■□□□□ 0.12
CAPN1-228ENST00000534373 ESR2Q92731 530 aa15.79■□□□□ 0.12
CAPN1-228ENST00000534373 TMEM47Q9BQJ4 181 aa15.79■□□□□ 0.12
CAPN1-228ENST00000534373 TSEN34Q9BSV6 310 aaKnown RBP15.79■□□□□ 0.12
CAPN1-228ENST00000534373 PNMA2Q9UL42 364 aa15.79■□□□□ 0.12
CAPN1-228ENST00000534373 PHF24Q9UPV7 400 aa15.79■□□□□ 0.12
CAPN1-228ENST00000534373 SMCHD1A6NHR9 2005 aa15.78■□□□□ 0.12
CAPN1-228ENST00000534373 POTEB2H3BUK9 544 aa15.78■□□□□ 0.12
CAPN1-228ENST00000534373 DUSP11O75319 330 aaKnown RBP15.78■□□□□ 0.12
CAPN1-228ENST00000534373 ADCYAP1R1P41586 468 aa15.78■□□□□ 0.12
CAPN1-228ENST00000534373 RTP1P59025 263 aa15.78■□□□□ 0.12
CAPN1-228ENST00000534373 HAND2P61296 217 aa15.78■□□□□ 0.12
CAPN1-228ENST00000534373 ACVR2BQ13705 512 aa15.78■□□□□ 0.12
CAPN1-228ENST00000534373 FAM133AQ8N9E0 248 aa15.78■□□□□ 0.12
CAPN1-228ENST00000534373 AGBL1Q96MI9 1066 aa15.78■□□□□ 0.12
CAPN1-228ENST00000534373 TRERF1Q96PN7 1200 aa15.78■□□□□ 0.12
CAPN1-228ENST00000534373 DSCC1Q9BVC3 393 aa15.78■□□□□ 0.12
CAPN1-228ENST00000534373 RNF146Q9NTX7 359 aa15.78■□□□□ 0.12
CAPN1-228ENST00000534373 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.78■□□□□ 0.12
CAPN1-228ENST00000534373 PRKAG2Q9UGJ0 569 aa15.78■□□□□ 0.12
CAPN1-228ENST00000534373 CTNNA3Q9UI47 895 aa15.78■□□□□ 0.12
CAPN1-228ENST00000534373 DNAH12Q6ZR08 3092 aa15.78■□□□□ 0.12
CAPN1-228ENST00000534373 SZT2Q5T011 3432 aa15.78■□□□□ 0.12
CAPN1-228ENST00000534373 MYCNP04198 464 aaPredicted RBP15.77■□□□□ 0.12
CAPN1-228ENST00000534373 ICAM1P05362 532 aa15.77■□□□□ 0.12
CAPN1-228ENST00000534373 LRIT3Q3SXY7 679 aa15.77■□□□□ 0.12
CAPN1-228ENST00000534373 GPR153Q6NV75 609 aa15.77■□□□□ 0.12
CAPN1-228ENST00000534373 DGKHQ86XP1 1220 aa15.77■□□□□ 0.12
CAPN1-228ENST00000534373 TDHQ8IZJ6 230 aa15.77■□□□□ 0.12
CAPN1-228ENST00000534373 FGD4Q96M96 766 aa15.77■□□□□ 0.12
CAPN1-228ENST00000534373 LBHD1Q9BQE6 289 aaPredicted RBP15.77■□□□□ 0.12
CAPN1-228ENST00000534373 UBE2OQ9C0C9 1292 aaKnown RBP15.77■□□□□ 0.12
CAPN1-228ENST00000534373 RANBP17Q9H2T7 1088 aaKnown RBP15.77■□□□□ 0.12
CAPN1-228ENST00000534373 A1CFQ9NQ94 594 aaKnown RBP15.77■□□□□ 0.12
CAPN1-228ENST00000534373 HOMER2Q9NSB8 354 aa15.77■□□□□ 0.12
CAPN1-228ENST00000534373 LAMA3Q16787 3333 aa15.76■□□□□ 0.11
CAPN1-228ENST00000534373 MOXD2PA6NHM9 499 aa15.76■□□□□ 0.11
CAPN1-228ENST00000534373 ASB14A6NK59 587 aa15.76■□□□□ 0.11
CAPN1-228ENST00000534373 ADAMTS4O75173 837 aa15.76■□□□□ 0.11
CAPN1-228ENST00000534373 PGK1P00558 417 aa15.76■□□□□ 0.11
CAPN1-228ENST00000534373 SNHG28P0DPA3 235 aa15.76■□□□□ 0.11
CAPN1-228ENST00000534373 PDHBP11177 359 aa15.76■□□□□ 0.11
CAPN1-228ENST00000534373 ALAS1P13196 640 aa15.76■□□□□ 0.11
CAPN1-228ENST00000534373 CCDC96Q2M329 555 aa15.76■□□□□ 0.11
CAPN1-228ENST00000534373 ARMCX2Q7L311 632 aa15.76■□□□□ 0.11
CAPN1-228ENST00000534373 IQCA1Q86XH1 822 aa15.76■□□□□ 0.11
CAPN1-228ENST00000534373 TBC1D10CQ8IV04 446 aa15.76■□□□□ 0.11
CAPN1-228ENST00000534373 KLHDC9Q8NEP7 349 aa15.76■□□□□ 0.11
CAPN1-228ENST00000534373 ZHX1Q9UKY1 873 aaPredicted RBP15.76■□□□□ 0.11
CAPN1-228ENST00000534373 CNTN2Q02246 1040 aa15.75■□□□□ 0.11
CAPN1-228ENST00000534373 IMMTQ16891 758 aaKnown RBP15.75■□□□□ 0.11
CAPN1-228ENST00000534373 GPATCH4Q5T3I0 446 aaKnown RBP15.75■□□□□ 0.11
CAPN1-228ENST00000534373 SYDE2Q5VT97 1194 aa15.75■□□□□ 0.11
CAPN1-228ENST00000534373 CCDC174Q6PII3 467 aa15.75■□□□□ 0.11
CAPN1-228ENST00000534373 CCDC144CPQ8IYA2 1237 aa15.75■□□□□ 0.11
CAPN1-228ENST00000534373 NUP133Q8WUM0 1156 aa15.75■□□□□ 0.11
CAPN1-228ENST00000534373 ANKS1AQ92625 1134 aa15.75■□□□□ 0.11
CAPN1-228ENST00000534373 FERMT2Q96AC1 680 aa15.75■□□□□ 0.11
CAPN1-228ENST00000534373 CHMP4CQ96CF2 233 aa15.75■□□□□ 0.11
CAPN1-228ENST00000534373 SPC25Q9HBM1 224 aa15.75■□□□□ 0.11
CAPN1-228ENST00000534373 CCPG1Q9ULG6 757 aa15.75■□□□□ 0.11
CAPN1-228ENST00000534373 MTMR7Q9Y216 660 aa15.75■□□□□ 0.11
CAPN1-228ENST00000534373 ATP11BQ9Y2G3 1177 aa15.75■□□□□ 0.11
CAPN1-228ENST00000534373 LOC102724159A0A0B4J2E5 919 aa15.74■□□□□ 0.11
CAPN1-228ENST00000534373 CST5P28325 142 aaPredicted RBP15.74■□□□□ 0.11
CAPN1-228ENST00000534373 NKX3-2P78367 333 aa15.74■□□□□ 0.11
CAPN1-228ENST00000534373 ZNF543Q08ER8 600 aa15.74■□□□□ 0.11
CAPN1-228ENST00000534373 PWP2Q15269 919 aaKnown RBP15.74■□□□□ 0.11
CAPN1-228ENST00000534373 CCDC144BQ3MJ40 725 aa15.74■□□□□ 0.11
CAPN1-228ENST00000534373 TTBK2Q6IQ55 1244 aa15.74■□□□□ 0.11
CAPN1-228ENST00000534373 PCSK9Q8NBP7 692 aaKnown RBP15.74■□□□□ 0.11
CAPN1-228ENST00000534373 KATNBL1Q9H079 304 aa15.74■□□□□ 0.11
CAPN1-228ENST00000534373 CYP39A1Q9NYL5 469 aa15.74■□□□□ 0.11
CAPN1-228ENST00000534373 SYNRGQ9UMZ2 1314 aa15.73■□□□□ 0.11
CAPN1-228ENST00000534373 A0A1W2PQ45 241 aaPredicted RBP15.73■□□□□ 0.11
CAPN1-228ENST00000534373 A0A1W2PQY0 241 aa15.73■□□□□ 0.11
CAPN1-228ENST00000534373 SOWAHBA6NEL2 793 aa15.73■□□□□ 0.11
CAPN1-228ENST00000534373 PDE4AP27815 886 aa15.73■□□□□ 0.11
CAPN1-228ENST00000534373 SLC16A2P36021 539 aa15.73■□□□□ 0.11
CAPN1-228ENST00000534373 ACLYP53396 1101 aa15.73■□□□□ 0.11
CAPN1-228ENST00000534373 GJA9P57773 515 aa15.73■□□□□ 0.11
CAPN1-228ENST00000534373 MDM2Q00987 491 aaPredicted RBP15.73■□□□□ 0.11
CAPN1-228ENST00000534373 TRIM60Q495X7 471 aa15.73■□□□□ 0.11
CAPN1-228ENST00000534373 MUM1L1Q5H9M0 696 aa15.73■□□□□ 0.11
CAPN1-228ENST00000534373 TTC22Q5TAA0 569 aa15.73■□□□□ 0.11
CAPN1-228ENST00000534373 CCSAPQ6IQ19 270 aaPredicted RBP15.73■□□□□ 0.11
CAPN1-228ENST00000534373 RASGRP2Q7LDG7 609 aa15.73■□□□□ 0.11
CAPN1-228ENST00000534373 RUFY2Q8WXA3 655 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms