RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 CHURC1Q8WUH1 139 aa16.6■□□□□ 0.25
SF3B2-215ENST00000534307 TMEM47Q9BQJ4 181 aa16.6■□□□□ 0.25
SF3B2-215ENST00000534307 TINF2Q9BSI4 451 aa16.6■□□□□ 0.25
SF3B2-215ENST00000534307 DSCC1Q9BVC3 393 aa16.6■□□□□ 0.25
SF3B2-215ENST00000534307 NRBP1Q9UHY1 535 aa16.6■□□□□ 0.25
SF3B2-215ENST00000534307 LTBP2Q14767 1821 aa16.6■□□□□ 0.25
SF3B2-215ENST00000534307 NEDD4P46934 1319 aa16.6■□□□□ 0.25
SF3B2-215ENST00000534307 TOP1P11387 765 aaKnown RBP16.59■□□□□ 0.25
SF3B2-215ENST00000534307 MFSD6Q6ZSS7 791 aa16.59■□□□□ 0.25
SF3B2-215ENST00000534307 CHST13Q8NET6 341 aa16.59■□□□□ 0.25
SF3B2-215ENST00000534307 DCAF4Q8WV16 495 aa16.59■□□□□ 0.25
SF3B2-215ENST00000534307 FGD4Q96M96 766 aa16.59■□□□□ 0.25
SF3B2-215ENST00000534307 RNF41Q9H4P4 317 aaPredicted RBP16.59■□□□□ 0.25
SF3B2-215ENST00000534307 TOMM22Q9NS69 142 aa16.59■□□□□ 0.25
SF3B2-215ENST00000534307 DNM1LO00429 736 aa16.58■□□□□ 0.24
SF3B2-215ENST00000534307 ZNF213O14771 459 aa16.58■□□□□ 0.24
SF3B2-215ENST00000534307 NT5C2P49902 561 aa16.58■□□□□ 0.24
SF3B2-215ENST00000534307 MAMDC4Q6UXC1 1216 aa16.58■□□□□ 0.24
SF3B2-215ENST00000534307 MSL3Q8N5Y2 521 aaKnown RBP16.58■□□□□ 0.24
SF3B2-215ENST00000534307 CHMP4CQ96CF2 233 aa16.58■□□□□ 0.24
SF3B2-215ENST00000534307 GUCD1Q96NT3 240 aa16.58■□□□□ 0.24
SF3B2-215ENST00000534307 FBXO40Q9UH90 709 aa16.58■□□□□ 0.24
SF3B2-215ENST00000534307 PRR12Q9ULL5 1215 aa16.58■□□□□ 0.24
SF3B2-215ENST00000534307 SMCHD1A6NHR9 2005 aa16.57■□□□□ 0.24
SF3B2-215ENST00000534307 SYNGAP1Q96PV0 1343 aa16.57■□□□□ 0.24
SF3B2-215ENST00000534307 ZNF865P0CJ78 1059 aaPredicted RBP16.57■□□□□ 0.24
SF3B2-215ENST00000534307 SNHG28P0DPA3 235 aa16.57■□□□□ 0.24
SF3B2-215ENST00000534307 TAL1P17542 331 aaPredicted RBP16.57■□□□□ 0.24
SF3B2-215ENST00000534307 LRRC26Q2I0M4 334 aa16.57■□□□□ 0.24
SF3B2-215ENST00000534307 BTNL9Q6UXG8 535 aa16.57■□□□□ 0.24
SF3B2-215ENST00000534307 ZNF467Q7Z7K2 595 aaPredicted RBP16.57■□□□□ 0.24
SF3B2-215ENST00000534307 ESR2Q92731 530 aa16.57■□□□□ 0.24
SF3B2-215ENST00000534307 DDX11Q96FC9 970 aa16.57■□□□□ 0.24
SF3B2-215ENST00000534307 AGBL1Q96MI9 1066 aa16.57■□□□□ 0.24
SF3B2-215ENST00000534307 TTC14Q96N46 770 aa16.57■□□□□ 0.24
SF3B2-215ENST00000534307 UBE2OQ9C0C9 1292 aaKnown RBP16.57■□□□□ 0.24
SF3B2-215ENST00000534307 CTDP1Q9Y5B0 961 aaPredicted RBP16.57■□□□□ 0.24
SF3B2-215ENST00000534307 RAD50Q92878 1312 aa16.56■□□□□ 0.24
SF3B2-215ENST00000534307 SNAI1O95863 264 aaPredicted RBP16.56■□□□□ 0.24
SF3B2-215ENST00000534307 PDHBP11177 359 aa16.56■□□□□ 0.24
SF3B2-215ENST00000534307 IKQ13123 557 aaPredicted RBP16.56■□□□□ 0.24
SF3B2-215ENST00000534307 ANO1Q5XXA6 986 aa16.56■□□□□ 0.24
SF3B2-215ENST00000534307 TTBK2Q6IQ55 1244 aa16.56■□□□□ 0.24
SF3B2-215ENST00000534307 RANBP17Q9H2T7 1088 aaKnown RBP16.56■□□□□ 0.24
SF3B2-215ENST00000534307 ISY1Q9ULR0 285 aaKnown RBP16.56■□□□□ 0.24
SF3B2-215ENST00000534307 CHMLP26374 656 aa16.55■□□□□ 0.24
SF3B2-215ENST00000534307 SLC4A3P48751 1232 aa16.55■□□□□ 0.24
SF3B2-215ENST00000534307 SNAP25P60880 206 aa16.55■□□□□ 0.24
SF3B2-215ENST00000534307 CCDC96Q2M329 555 aa16.55■□□□□ 0.24
SF3B2-215ENST00000534307 TKFCQ3LXA3 575 aa16.55■□□□□ 0.24
SF3B2-215ENST00000534307 DGKHQ86XP1 1220 aa16.55■□□□□ 0.24
SF3B2-215ENST00000534307 ANKRD35Q8N283 1001 aa16.55■□□□□ 0.24
SF3B2-215ENST00000534307 FAM133AQ8N9E0 248 aa16.55■□□□□ 0.24
SF3B2-215ENST00000534307 ARRDC4Q8NCT1 418 aa16.55■□□□□ 0.24
SF3B2-215ENST00000534307 ACAD9Q9H845 621 aa16.55■□□□□ 0.24
SF3B2-215ENST00000534307 HOMER2Q9NSB8 354 aa16.55■□□□□ 0.24
SF3B2-215ENST00000534307 MTMR7Q9Y216 660 aa16.55■□□□□ 0.24
SF3B2-215ENST00000534307 MCM3APO60318 1980 aa16.55■□□□□ 0.24
SF3B2-215ENST00000534307 LCTP09848 1927 aa16.55■□□□□ 0.24
SF3B2-215ENST00000534307 KDM4AO75164 1064 aa16.54■□□□□ 0.24
SF3B2-215ENST00000534307 SLC16A2P36021 539 aa16.54■□□□□ 0.24
SF3B2-215ENST00000534307 CNTN2Q02246 1040 aa16.54■□□□□ 0.24
SF3B2-215ENST00000534307 ZNF543Q08ER8 600 aa16.54■□□□□ 0.24
SF3B2-215ENST00000534307 IMMTQ16891 758 aaKnown RBP16.54■□□□□ 0.24
SF3B2-215ENST00000534307 GJC2Q5T442 439 aaPredicted RBP16.54■□□□□ 0.24
SF3B2-215ENST00000534307 ANKS1AQ92625 1134 aa16.54■□□□□ 0.24
SF3B2-215ENST00000534307 SENP6Q9GZR1 1112 aaPredicted RBP16.54■□□□□ 0.24
SF3B2-215ENST00000534307 A1CFQ9NQ94 594 aaKnown RBP16.54■□□□□ 0.24
SF3B2-215ENST00000534307 RNF146Q9NTX7 359 aa16.54■□□□□ 0.24
SF3B2-215ENST00000534307 CTNNA3Q9UI47 895 aa16.54■□□□□ 0.24
SF3B2-215ENST00000534307 ASTN1O14525 1302 aa16.53■□□□□ 0.24
SF3B2-215ENST00000534307 FRMPD2Q68DX3 1309 aaPredicted RBP16.53■□□□□ 0.24
SF3B2-215ENST00000534307 POTEB2H3BUK9 544 aa16.53■□□□□ 0.24
SF3B2-215ENST00000534307 ICAM1P05362 532 aa16.53■□□□□ 0.24
SF3B2-215ENST00000534307 LRRC41Q15345 812 aa16.53■□□□□ 0.24
SF3B2-215ENST00000534307 SYDE2Q5VT97 1194 aa16.53■□□□□ 0.24
SF3B2-215ENST00000534307 CCDC174Q6PII3 467 aa16.53■□□□□ 0.24
SF3B2-215ENST00000534307 TRERF1Q96PN7 1200 aa16.53■□□□□ 0.24
SF3B2-215ENST00000534307 ZKSCAN3Q9BRR0 538 aa16.53■□□□□ 0.24
SF3B2-215ENST00000534307 CNPY2Q9Y2B0 182 aa16.53■□□□□ 0.24
SF3B2-215ENST00000534307 LRRC37A2A6NM11 1700 aa16.53■□□□□ 0.24
SF3B2-215ENST00000534307 B4E1Z4 1266 aa16.52■□□□□ 0.24
SF3B2-215ENST00000534307 RARBP10826 455 aa16.52■□□□□ 0.24
SF3B2-215ENST00000534307 ALAS1P13196 640 aa16.52■□□□□ 0.24
SF3B2-215ENST00000534307 AKR1A1P14550 325 aa16.52■□□□□ 0.24
SF3B2-215ENST00000534307 SNX17Q15036 470 aa16.52■□□□□ 0.24
SF3B2-215ENST00000534307 MUM1L1Q5H9M0 696 aa16.52■□□□□ 0.24
SF3B2-215ENST00000534307 FAM109BQ6ICB4 259 aaPredicted RBP16.52■□□□□ 0.24
SF3B2-215ENST00000534307 LENG1Q96BZ8 264 aaPredicted RBP16.52■□□□□ 0.24
SF3B2-215ENST00000534307 KATNBL1Q9H079 304 aa16.52■□□□□ 0.24
SF3B2-215ENST00000534307 GPCPD1Q9NPB8 672 aa16.52■□□□□ 0.24
SF3B2-215ENST00000534307 XPNPEP3Q9NQH7 507 aa16.52■□□□□ 0.24
SF3B2-215ENST00000534307 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.52■□□□□ 0.24
SF3B2-215ENST00000534307 ZSWIM5Q9P217 1185 aa16.52■□□□□ 0.24
SF3B2-215ENST00000534307 SOWAHBA6NEL2 793 aa16.51■□□□□ 0.23
SF3B2-215ENST00000534307 KBTBD13C9JR72 458 aa16.51■□□□□ 0.23
SF3B2-215ENST00000534307 SGSM2O43147 1006 aa16.51■□□□□ 0.23
SF3B2-215ENST00000534307 ADAMTS4O75173 837 aa16.51■□□□□ 0.23
SF3B2-215ENST00000534307 ARMCX2Q7L311 632 aa16.51■□□□□ 0.23
SF3B2-215ENST00000534307 IQCA1Q86XH1 822 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms