RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 ZNF543Q08ER8 600 aa18.12■□□□□ 0.49
UBXN1-217ENST00000534176 PWP2Q15269 919 aaKnown RBP18.12■□□□□ 0.49
UBXN1-217ENST00000534176 SYDE2Q5VT97 1194 aa18.12■□□□□ 0.49
UBXN1-217ENST00000534176 MAMDC4Q6UXC1 1216 aa18.12■□□□□ 0.49
UBXN1-217ENST00000534176 RALYLQ86SE5 291 aaKnown RBP18.12■□□□□ 0.49
UBXN1-217ENST00000534176 PNMA1Q8ND90 353 aa18.12■□□□□ 0.49
UBXN1-217ENST00000534176 PAWRQ96IZ0 340 aaKnown RBP18.12■□□□□ 0.49
UBXN1-217ENST00000534176 RANBP17Q9H2T7 1088 aaKnown RBP18.12■□□□□ 0.49
UBXN1-217ENST00000534176 C11orf49Q9H6J7 331 aa18.12■□□□□ 0.49
UBXN1-217ENST00000534176 ZSWIM5Q9P217 1185 aa18.12■□□□□ 0.49
UBXN1-217ENST00000534176 B4E1Z4 1266 aa18.11■□□□□ 0.49
UBXN1-217ENST00000534176 ASPRV1Q53RT3 343 aa18.11■□□□□ 0.49
UBXN1-217ENST00000534176 NCOA7Q8NI08 942 aa18.11■□□□□ 0.49
UBXN1-217ENST00000534176 MAP4K1Q92918 833 aa18.11■□□□□ 0.49
UBXN1-217ENST00000534176 MTA3Q9BTC8 594 aa18.11■□□□□ 0.49
UBXN1-217ENST00000534176 MKI67P46013 3256 aaKnown RBP18.1■□□□□ 0.49
UBXN1-217ENST00000534176 ZNFX1Q9P2E3 1918 aaKnown RBP18.1■□□□□ 0.49
UBXN1-217ENST00000534176 TNKSO95271 1327 aa18.1■□□□□ 0.49
UBXN1-217ENST00000534176 WDR19Q8NEZ3 1342 aa18.1■□□□□ 0.49
UBXN1-217ENST00000534176 DNM1LO00429 736 aa18.1■□□□□ 0.49
UBXN1-217ENST00000534176 EVI5O60447 810 aa18.1■□□□□ 0.49
UBXN1-217ENST00000534176 IFIT1BQ5T764 474 aaKnown RBP18.1■□□□□ 0.49
UBXN1-217ENST00000534176 ERICH6BQ5W0A0 696 aa18.1■□□□□ 0.49
UBXN1-217ENST00000534176 TRERF1Q96PN7 1200 aa18.1■□□□□ 0.49
UBXN1-217ENST00000534176 RNF146Q9NTX7 359 aa18.1■□□□□ 0.49
UBXN1-217ENST00000534176 CCPG1Q9ULG6 757 aa18.1■□□□□ 0.49
UBXN1-217ENST00000534176 RIPK3Q9Y572 518 aa18.1■□□□□ 0.49
UBXN1-217ENST00000534176 ZNF536O15090 1300 aa18.09■□□□□ 0.49
UBXN1-217ENST00000534176 ASB14A6NK59 587 aa18.09■□□□□ 0.49
UBXN1-217ENST00000534176 PGK2P07205 417 aa18.09■□□□□ 0.49
UBXN1-217ENST00000534176 RARBP10826 455 aa18.09■□□□□ 0.49
UBXN1-217ENST00000534176 AKR1A1P14550 325 aa18.09■□□□□ 0.49
UBXN1-217ENST00000534176 SLC4A3P48751 1232 aa18.09■□□□□ 0.49
UBXN1-217ENST00000534176 TRAF1Q13077 416 aa18.09■□□□□ 0.49
UBXN1-217ENST00000534176 ENAHQ8N8S7 591 aaPredicted RBP18.09■□□□□ 0.49
UBXN1-217ENST00000534176 MPHOSPH6Q99547 160 aaKnown RBP18.09■□□□□ 0.49
UBXN1-217ENST00000534176 ABHD16BQ9H3Z7 469 aa18.09■□□□□ 0.49
UBXN1-217ENST00000534176 MTMR7Q9Y216 660 aa18.09■□□□□ 0.49
UBXN1-217ENST00000534176 PLXNA1Q9UIW2 1896 aa18.08■□□□□ 0.49
UBXN1-217ENST00000534176 KBTBD13C9JR72 458 aa18.08■□□□□ 0.48
UBXN1-217ENST00000534176 POTEB2H3BUK9 544 aa18.08■□□□□ 0.48
UBXN1-217ENST00000534176 CYP21A2P08686 494 aa18.08■□□□□ 0.48
UBXN1-217ENST00000534176 ALAS1P13196 640 aa18.08■□□□□ 0.48
UBXN1-217ENST00000534176 RNF20Q5VTR2 975 aa18.08■□□□□ 0.48
UBXN1-217ENST00000534176 IL25Q9H293 177 aa18.08■□□□□ 0.48
UBXN1-217ENST00000534176 ADD3Q9UEY8 706 aaKnown RBP18.08■□□□□ 0.48
UBXN1-217ENST00000534176 B4DLN1 442 aa18.07■□□□□ 0.48
UBXN1-217ENST00000534176 PARP1P09874 1014 aaKnown RBP18.07■□□□□ 0.48
UBXN1-217ENST00000534176 COL6A1P12109 1028 aa18.07■□□□□ 0.48
UBXN1-217ENST00000534176 MRPL12P52815 198 aaKnown RBP18.07■□□□□ 0.48
UBXN1-217ENST00000534176 CCDC174Q6PII3 467 aa18.07■□□□□ 0.48
UBXN1-217ENST00000534176 RNF180Q86T96 592 aa18.07■□□□□ 0.48
UBXN1-217ENST00000534176 AGBL1Q96MI9 1066 aa18.07■□□□□ 0.48
UBXN1-217ENST00000534176 ZKSCAN3Q9BRR0 538 aa18.07■□□□□ 0.48
UBXN1-217ENST00000534176 ESYT1Q9BSJ8 1104 aa18.07■□□□□ 0.48
UBXN1-217ENST00000534176 GPCPD1Q9NPB8 672 aa18.07■□□□□ 0.48
UBXN1-217ENST00000534176 HOMER2Q9NSB8 354 aa18.07■□□□□ 0.48
UBXN1-217ENST00000534176 FAM184BQ9ULE4 1060 aa18.07■□□□□ 0.48
UBXN1-217ENST00000534176 FRMPD2Q68DX3 1309 aaPredicted RBP18.06■□□□□ 0.48
UBXN1-217ENST00000534176 PTH1RQ03431 593 aa18.06■□□□□ 0.48
UBXN1-217ENST00000534176 TMTC2Q8N394 836 aa18.06■□□□□ 0.48
UBXN1-217ENST00000534176 FAM133AQ8N9E0 248 aa18.06■□□□□ 0.48
UBXN1-217ENST00000534176 TRPV1Q8NER1 839 aa18.06■□□□□ 0.48
UBXN1-217ENST00000534176 SPC25Q9HBM1 224 aa18.06■□□□□ 0.48
UBXN1-217ENST00000534176 A1CFQ9NQ94 594 aaKnown RBP18.06■□□□□ 0.48
UBXN1-217ENST00000534176 E7EWF7 191 aa18.05■□□□□ 0.48
UBXN1-217ENST00000534176 CENPBP07199 599 aaPredicted RBP18.05■□□□□ 0.48
UBXN1-217ENST00000534176 MNX1P50219 401 aaPredicted RBP18.05■□□□□ 0.48
UBXN1-217ENST00000534176 RGS22Q8NE09 1264 aa18.05■□□□□ 0.48
UBXN1-217ENST00000534176 CYP39A1Q9NYL5 469 aa18.05■□□□□ 0.48
UBXN1-217ENST00000534176 RBM8AQ9Y5S9 174 aaKnown RBP18.05■□□□□ 0.48
UBXN1-217ENST00000534176 FRMPD3Q5JV73 1810 aa18.05■□□□□ 0.48
UBXN1-217ENST00000534176 IFIT3O14879 490 aaKnown RBP18.04■□□□□ 0.48
UBXN1-217ENST00000534176 CDC45O75419 566 aa18.04■□□□□ 0.48
UBXN1-217ENST00000534176 SLC16A2P36021 539 aa18.04■□□□□ 0.48
UBXN1-217ENST00000534176 SEC23AQ15436 765 aa18.04■□□□□ 0.48
UBXN1-217ENST00000534176 TTBK2Q6IQ55 1244 aa18.04■□□□□ 0.48
UBXN1-217ENST00000534176 DIS3LQ8TF46 1054 aaKnown RBP18.04■□□□□ 0.48
UBXN1-217ENST00000534176 MAP3K14Q99558 947 aa18.04■□□□□ 0.48
UBXN1-217ENST00000534176 XPNPEP3Q9NQH7 507 aa18.04■□□□□ 0.48
UBXN1-217ENST00000534176 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.04■□□□□ 0.48
UBXN1-217ENST00000534176 ZNF865P0CJ78 1059 aaPredicted RBP18.03■□□□□ 0.48
UBXN1-217ENST00000534176 ACVR2BQ13705 512 aa18.03■□□□□ 0.48
UBXN1-217ENST00000534176 WTAPQ15007 396 aa18.03■□□□□ 0.48
UBXN1-217ENST00000534176 ARMCX2Q7L311 632 aa18.03■□□□□ 0.48
UBXN1-217ENST00000534176 MCF2L2Q86YR7 1114 aa18.03■□□□□ 0.48
UBXN1-217ENST00000534176 SAMD3Q8N6K7 520 aa18.03■□□□□ 0.48
UBXN1-217ENST00000534176 DNERQ8NFT8 737 aa18.03■□□□□ 0.48
UBXN1-217ENST00000534176 TSEN34Q9BSV6 310 aaKnown RBP18.03■□□□□ 0.48
UBXN1-217ENST00000534176 ANO2Q9NQ90 1003 aa18.03■□□□□ 0.48
UBXN1-217ENST00000534176 ABCB11O95342 1321 aa18.02■□□□□ 0.48
UBXN1-217ENST00000534176 A0A1W2PPC1 479 aa18.02■□□□□ 0.48
UBXN1-217ENST00000534176 H0YGN5 161 aa18.02■□□□□ 0.48
UBXN1-217ENST00000534176 DUSP11O75319 330 aaKnown RBP18.02■□□□□ 0.48
UBXN1-217ENST00000534176 SNAI1O95863 264 aaPredicted RBP18.02■□□□□ 0.48
UBXN1-217ENST00000534176 MCM5P33992 734 aa18.02■□□□□ 0.48
UBXN1-217ENST00000534176 C1orf53Q5VUE5 145 aa18.02■□□□□ 0.48
UBXN1-217ENST00000534176 NSMFQ6X4W1 530 aa18.02■□□□□ 0.48
UBXN1-217ENST00000534176 CATIPQ7Z7H3 387 aa18.02■□□□□ 0.48
UBXN1-217ENST00000534176 TMEM87BQ96K49 555 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms