RNA–Protein interactions for RNA: ENST00000534045.5

LRRK1-210, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 3

Gene LRRK1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-210ENST00000534045 ZMYND8Q9ULU4 1186 aaPredicted RBP22.32■■□□□ 1.16
LRRK1-210ENST00000534045 PFASO15067 1338 aa22.31■■□□□ 1.16
LRRK1-210ENST00000534045 POTEB2H3BUK9 544 aa22.31■■□□□ 1.16
LRRK1-210ENST00000534045 NOVP48745 357 aa22.31■■□□□ 1.16
LRRK1-210ENST00000534045 ZKSCAN3Q9BRR0 538 aa22.31■■□□□ 1.16
LRRK1-210ENST00000534045 RNF146Q9NTX7 359 aa22.31■■□□□ 1.16
LRRK1-210ENST00000534045 ALPK3Q96L96 1907 aa22.31■■□□□ 1.16
LRRK1-210ENST00000534045 AKR1A1P14550 325 aa22.3■■□□□ 1.16
LRRK1-210ENST00000534045 SLC16A2P36021 539 aa22.3■■□□□ 1.16
LRRK1-210ENST00000534045 ATN1P54259 1190 aaPredicted RBP22.3■■□□□ 1.16
LRRK1-210ENST00000534045 SNAP25P60880 206 aa22.3■■□□□ 1.16
LRRK1-210ENST00000534045 KRT23Q9C075 422 aa22.3■■□□□ 1.16
LRRK1-210ENST00000534045 XPNPEP3Q9NQH7 507 aa22.3■■□□□ 1.16
LRRK1-210ENST00000534045 RBM27Q9P2N5 1060 aaKnown RBP22.3■■□□□ 1.16
LRRK1-210ENST00000534045 FAM184BQ9ULE4 1060 aa22.3■■□□□ 1.16
LRRK1-210ENST00000534045 CCPG1Q9ULG6 757 aa22.3■■□□□ 1.16
LRRK1-210ENST00000534045 FRMPD2Q68DX3 1309 aaPredicted RBP22.3■■□□□ 1.16
LRRK1-210ENST00000534045 DNAJC25-GNG10A0A024R161 153 aa22.29■■□□□ 1.16
LRRK1-210ENST00000534045 KDM4AO75164 1064 aa22.29■■□□□ 1.16
LRRK1-210ENST00000534045 SYDE2Q5VT97 1194 aa22.29■■□□□ 1.16
LRRK1-210ENST00000534045 ZNF467Q7Z7K2 595 aaPredicted RBP22.29■■□□□ 1.16
LRRK1-210ENST00000534045 RNF180Q86T96 592 aa22.29■■□□□ 1.16
LRRK1-210ENST00000534045 DGKHQ86XP1 1220 aa22.29■■□□□ 1.16
LRRK1-210ENST00000534045 CNNM2Q9H8M5 875 aa22.29■■□□□ 1.16
LRRK1-210ENST00000534045 ZHX1Q9UKY1 873 aaPredicted RBP22.29■■□□□ 1.16
LRRK1-210ENST00000534045 SYNGAP1Q96PV0 1343 aa22.29■■□□□ 1.16
LRRK1-210ENST00000534045 B4E1Z4 1266 aa22.28■■□□□ 1.16
LRRK1-210ENST00000534045 GSPT1P15170 499 aaKnown RBP22.28■■□□□ 1.16
LRRK1-210ENST00000534045 SYN1P17600 705 aa22.28■■□□□ 1.16
LRRK1-210ENST00000534045 LRRC26Q2I0M4 334 aa22.28■■□□□ 1.16
LRRK1-210ENST00000534045 TTBK2Q6IQ55 1244 aa22.28■■□□□ 1.16
LRRK1-210ENST00000534045 MAMDC4Q6UXC1 1216 aa22.28■■□□□ 1.16
LRRK1-210ENST00000534045 KAT14Q9H8E8 782 aa22.28■■□□□ 1.16
LRRK1-210ENST00000534045 PRKAG2Q9UGJ0 569 aa22.28■■□□□ 1.16
LRRK1-210ENST00000534045 PNMA2Q9UL42 364 aa22.28■■□□□ 1.16
LRRK1-210ENST00000534045 NEDD4P46934 1319 aa22.28■■□□□ 1.16
LRRK1-210ENST00000534045 PDHBP11177 359 aa22.27■■□□□ 1.16
LRRK1-210ENST00000534045 TAL1P17542 331 aaPredicted RBP22.27■■□□□ 1.16
LRRK1-210ENST00000534045 TRDNQ13061 729 aa22.27■■□□□ 1.16
LRRK1-210ENST00000534045 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.27■■□□□ 1.16
LRRK1-210ENST00000534045 RASGRP2Q7LDG7 609 aa22.27■■□□□ 1.16
LRRK1-210ENST00000534045 UBAC1Q9BSL1 405 aa22.27■■□□□ 1.16
LRRK1-210ENST00000534045 ABHD16BQ9H3Z7 469 aa22.27■■□□□ 1.16
LRRK1-210ENST00000534045 ZNF536O15090 1300 aa22.27■■□□□ 1.16
LRRK1-210ENST00000534045 SNAI1O95863 264 aaPredicted RBP22.26■■□□□ 1.15
LRRK1-210ENST00000534045 ICAM1P05362 532 aa22.26■■□□□ 1.15
LRRK1-210ENST00000534045 ZNF865P0CJ78 1059 aaPredicted RBP22.26■■□□□ 1.15
LRRK1-210ENST00000534045 ADCYAP1R1P41586 468 aa22.26■■□□□ 1.15
LRRK1-210ENST00000534045 ACVR2BQ13705 512 aa22.26■■□□□ 1.15
LRRK1-210ENST00000534045 LRRC41Q15345 812 aa22.26■■□□□ 1.15
LRRK1-210ENST00000534045 BTNL9Q6UXG8 535 aa22.26■■□□□ 1.15
LRRK1-210ENST00000534045 NSMFQ6X4W1 530 aa22.26■■□□□ 1.15
LRRK1-210ENST00000534045 ZSCAN10Q96SZ4 725 aaPredicted RBP22.26■■□□□ 1.15
LRRK1-210ENST00000534045 SPC25Q9HBM1 224 aa22.26■■□□□ 1.15
LRRK1-210ENST00000534045 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.26■■□□□ 1.15
LRRK1-210ENST00000534045 ZSWIM5Q9P217 1185 aa22.26■■□□□ 1.15
LRRK1-210ENST00000534045 RAD50Q92878 1312 aa22.26■■□□□ 1.15
LRRK1-210ENST00000534045 ASB14A6NK59 587 aa22.25■■□□□ 1.15
LRRK1-210ENST00000534045 PGK1P00558 417 aa22.25■■□□□ 1.15
LRRK1-210ENST00000534045 CHMLP26374 656 aa22.25■■□□□ 1.15
LRRK1-210ENST00000534045 ZNF543Q08ER8 600 aa22.25■■□□□ 1.15
LRRK1-210ENST00000534045 GPATCH4Q5T3I0 446 aaKnown RBP22.25■■□□□ 1.15
LRRK1-210ENST00000534045 FERMT2Q96AC1 680 aa22.25■■□□□ 1.15
LRRK1-210ENST00000534045 RANBP17Q9H2T7 1088 aaKnown RBP22.25■■□□□ 1.15
LRRK1-210ENST00000534045 A1CFQ9NQ94 594 aaKnown RBP22.25■■□□□ 1.15
LRRK1-210ENST00000534045 CNTN2Q02246 1040 aa22.24■■□□□ 1.15
LRRK1-210ENST00000534045 SLC39A5Q6ZMH5 540 aa22.24■■□□□ 1.15
LRRK1-210ENST00000534045 NOL8Q76FK4 1167 aaKnown RBP22.24■■□□□ 1.15
LRRK1-210ENST00000534045 ARMCX2Q7L311 632 aa22.24■■□□□ 1.15
LRRK1-210ENST00000534045 CCDC144CPQ8IYA2 1237 aa22.24■■□□□ 1.15
LRRK1-210ENST00000534045 PNMA1Q8ND90 353 aa22.24■■□□□ 1.15
LRRK1-210ENST00000534045 LBHD1Q9BQE6 289 aaPredicted RBP22.24■■□□□ 1.15
LRRK1-210ENST00000534045 ATP11BQ9Y2G3 1177 aa22.24■■□□□ 1.15
LRRK1-210ENST00000534045 U3KPZ7 1027 aaPredicted RBP22.24■■□□□ 1.15
LRRK1-210ENST00000534045 MUM1L1Q5H9M0 696 aa22.23■■□□□ 1.15
LRRK1-210ENST00000534045 A0A1W2PPC1 479 aa22.22■■□□□ 1.15
LRRK1-210ENST00000534045 DHX16O60231 1041 aaKnown RBP22.22■■□□□ 1.15
LRRK1-210ENST00000534045 GOLGA8HP0CJ92 632 aa22.22■■□□□ 1.15
LRRK1-210ENST00000534045 FXR1P51114 621 aaKnown RBP eCLIP22.22■■□□□ 1.15
LRRK1-210ENST00000534045 RTP1P59025 263 aa22.22■■□□□ 1.15
LRRK1-210ENST00000534045 KIAA1211Q6ZU35 1233 aa22.22■■□□□ 1.15
LRRK1-210ENST00000534045 FAM133AQ8N9E0 248 aa22.22■■□□□ 1.15
LRRK1-210ENST00000534045 PTPDC1A2A3K4 754 aa22.21■■□□□ 1.15
LRRK1-210ENST00000534045 DUSP11O75319 330 aaKnown RBP22.21■■□□□ 1.15
LRRK1-210ENST00000534045 SNHG28P0DPA3 235 aa22.21■■□□□ 1.15
LRRK1-210ENST00000534045 CCDC144BQ3MJ40 725 aa22.21■■□□□ 1.15
LRRK1-210ENST00000534045 IFIT1BQ5T764 474 aaKnown RBP22.21■■□□□ 1.15
LRRK1-210ENST00000534045 ANKS1AQ92625 1134 aa22.21■■□□□ 1.15
LRRK1-210ENST00000534045 VTI1AQ96AJ9 217 aa22.21■■□□□ 1.15
LRRK1-210ENST00000534045 UBE2OQ9C0C9 1292 aaKnown RBP22.21■■□□□ 1.15
LRRK1-210ENST00000534045 CYP39A1Q9NYL5 469 aa22.21■■□□□ 1.15
LRRK1-210ENST00000534045 ADD3Q9UEY8 706 aaKnown RBP22.21■■□□□ 1.15
LRRK1-210ENST00000534045 TNKSO95271 1327 aa22.21■■□□□ 1.15
LRRK1-210ENST00000534045 MCM3APO60318 1980 aa22.21■■□□□ 1.15
LRRK1-210ENST00000534045 ERICH2A1L162 156 aa22.2■■□□□ 1.14
LRRK1-210ENST00000534045 BMP8BP34820 402 aa22.2■■□□□ 1.14
LRRK1-210ENST00000534045 MAGEA10P43363 369 aaPredicted RBP22.2■■□□□ 1.14
LRRK1-210ENST00000534045 BAATQ14032 418 aaPredicted RBP22.2■■□□□ 1.14
LRRK1-210ENST00000534045 RALYLQ86SE5 291 aaKnown RBP22.2■■□□□ 1.14
LRRK1-210ENST00000534045 NUP133Q8WUM0 1156 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms