RNA–Protein interactions for RNA: ENST00000533905.1

CLP1-206, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 4

Gene CLP1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-206ENST00000533905 C1orf53Q5VUE5 145 aa12.23□□□□□ -0.45
CLP1-206ENST00000533905 SLFN13Q68D06 897 aa12.23□□□□□ -0.45
CLP1-206ENST00000533905 TTBK2Q6IQ55 1244 aa12.23□□□□□ -0.45
CLP1-206ENST00000533905 ZSCAN25Q6NSZ9 544 aa12.23□□□□□ -0.45
CLP1-206ENST00000533905 GIMAP6Q6P9H5 292 aa12.23□□□□□ -0.45
CLP1-206ENST00000533905 MAMDC4Q6UXC1 1216 aa12.23□□□□□ -0.45
CLP1-206ENST00000533905 ARMCX2Q7L311 632 aa12.23□□□□□ -0.45
CLP1-206ENST00000533905 ZNF589Q86UQ0 364 aaPredicted RBP12.23□□□□□ -0.45
CLP1-206ENST00000533905 CCDC144CPQ8IYA2 1237 aa12.23□□□□□ -0.45
CLP1-206ENST00000533905 NEDD1Q8NHV4 660 aa12.23□□□□□ -0.45
CLP1-206ENST00000533905 MKL1Q969V6 931 aa12.23□□□□□ -0.45
CLP1-206ENST00000533905 VWCEQ96DN2 955 aa12.23□□□□□ -0.45
CLP1-206ENST00000533905 FAM227BQ96M60 508 aa12.23□□□□□ -0.45
CLP1-206ENST00000533905 SEMA6BQ9H3T3 888 aa12.23□□□□□ -0.45
CLP1-206ENST00000533905 A1CFQ9NQ94 594 aaKnown RBP12.23□□□□□ -0.45
CLP1-206ENST00000533905 TBX21Q9UL17 535 aa12.23□□□□□ -0.45
CLP1-206ENST00000533905 MTMR7Q9Y216 660 aa12.23□□□□□ -0.45
CLP1-206ENST00000533905 GRIN2DO15399 1336 aa12.22□□□□□ -0.45
CLP1-206ENST00000533905 TMEM232C9JQI7 657 aa12.22□□□□□ -0.45
CLP1-206ENST00000533905 ATP2A1O14983 1001 aa12.22□□□□□ -0.45
CLP1-206ENST00000533905 KIAA0355O15063 1070 aa12.22□□□□□ -0.45
CLP1-206ENST00000533905 MCCP23508 829 aa12.22□□□□□ -0.45
CLP1-206ENST00000533905 PBX2P40425 430 aa12.22□□□□□ -0.45
CLP1-206ENST00000533905 ACVR2BQ13705 512 aa12.22□□□□□ -0.45
CLP1-206ENST00000533905 CCDC144BQ3MJ40 725 aa12.22□□□□□ -0.45
CLP1-206ENST00000533905 CCDC174Q6PII3 467 aa12.22□□□□□ -0.45
CLP1-206ENST00000533905 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.22□□□□□ -0.45
CLP1-206ENST00000533905 PRPF38AQ8NAV1 312 aaKnown RBP12.22□□□□□ -0.45
CLP1-206ENST00000533905 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.22□□□□□ -0.45
CLP1-206ENST00000533905 FSD1Q9BTV5 496 aa12.22□□□□□ -0.45
CLP1-206ENST00000533905 PRDM6Q9NQX0 595 aa12.22□□□□□ -0.45
CLP1-206ENST00000533905 DIS3Q9Y2L1 958 aaKnown RBP12.22□□□□□ -0.45
CLP1-206ENST00000533905 SYNGAP1Q96PV0 1343 aa12.21□□□□□ -0.45
CLP1-206ENST00000533905 ASGR1P07306 291 aa12.21□□□□□ -0.45
CLP1-206ENST00000533905 ACRP10323 421 aa12.21□□□□□ -0.45
CLP1-206ENST00000533905 BMP3P12645 472 aa12.21□□□□□ -0.45
CLP1-206ENST00000533905 SLC16A2P36021 539 aa12.21□□□□□ -0.45
CLP1-206ENST00000533905 IRX6P78412 446 aaPredicted RBP12.21□□□□□ -0.45
CLP1-206ENST00000533905 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.21□□□□□ -0.45
CLP1-206ENST00000533905 FBXO16Q8IX29 292 aaPredicted RBP12.21□□□□□ -0.45
CLP1-206ENST00000533905 AMOTL1Q8IY63 956 aa12.21□□□□□ -0.45
CLP1-206ENST00000533905 FAM133AQ8N9E0 248 aa12.21□□□□□ -0.45
CLP1-206ENST00000533905 GMCL1P1Q8NEA9 526 aa12.21□□□□□ -0.45
CLP1-206ENST00000533905 UPF3AQ9H1J1 476 aaKnown RBP12.21□□□□□ -0.45
CLP1-206ENST00000533905 TTLL1O95922 423 aa12.2□□□□□ -0.46
CLP1-206ENST00000533905 MX1P20591 662 aa12.2□□□□□ -0.46
CLP1-206ENST00000533905 CDK7P50613 346 aa12.2□□□□□ -0.46
CLP1-206ENST00000533905 GRIN2CQ14957 1233 aa12.2□□□□□ -0.46
CLP1-206ENST00000533905 EEPD1Q7L9B9 569 aa12.2□□□□□ -0.46
CLP1-206ENST00000533905 ANKRD33Q7Z3H0 272 aa12.2□□□□□ -0.46
CLP1-206ENST00000533905 RNF180Q86T96 592 aa12.2□□□□□ -0.46
CLP1-206ENST00000533905 DDX11Q96FC9 970 aa12.2□□□□□ -0.46
CLP1-206ENST00000533905 DDRGK1Q96HY6 314 aa12.2□□□□□ -0.46
CLP1-206ENST00000533905 RNPC3Q96LT9 517 aaKnown RBP12.2□□□□□ -0.46
CLP1-206ENST00000533905 PPP1R12CQ9BZL4 782 aa12.2□□□□□ -0.46
CLP1-206ENST00000533905 CPVLQ9H3G5 476 aa12.2□□□□□ -0.46
CLP1-206ENST00000533905 STARD7Q9NQZ5 370 aa12.2□□□□□ -0.46
CLP1-206ENST00000533905 RNF146Q9NTX7 359 aa12.2□□□□□ -0.46
CLP1-206ENST00000533905 SLC5A4Q9NY91 659 aa12.2□□□□□ -0.46
CLP1-206ENST00000533905 PRKAG2Q9UGJ0 569 aa12.2□□□□□ -0.46
CLP1-206ENST00000533905 NRBP1Q9UHY1 535 aa12.2□□□□□ -0.46
CLP1-206ENST00000533905 FEM1BQ9UK73 627 aa12.2□□□□□ -0.46
CLP1-206ENST00000533905 CNPY2Q9Y2B0 182 aa12.2□□□□□ -0.46
CLP1-206ENST00000533905 FRMPD2Q68DX3 1309 aaPredicted RBP12.19□□□□□ -0.46
CLP1-206ENST00000533905 TTC41PQ6P2S7 1318 aa12.19□□□□□ -0.46
CLP1-206ENST00000533905 NFIBO00712 420 aa12.19□□□□□ -0.46
CLP1-206ENST00000533905 ZBED4O75132 1171 aa12.19□□□□□ -0.46
CLP1-206ENST00000533905 C6orf222P0C671 652 aaPredicted RBP12.19□□□□□ -0.46
CLP1-206ENST00000533905 TSPY3P0CV98 308 aa12.19□□□□□ -0.46
CLP1-206ENST00000533905 TSPY8P0CW00 308 aa12.19□□□□□ -0.46
CLP1-206ENST00000533905 CSF2RAP15509 400 aa12.19□□□□□ -0.46
CLP1-206ENST00000533905 SMPD1P17405 629 aa12.19□□□□□ -0.46
CLP1-206ENST00000533905 NOVP48745 357 aa12.19□□□□□ -0.46
CLP1-206ENST00000533905 GJA9P57773 515 aa12.19□□□□□ -0.46
CLP1-206ENST00000533905 PSMC6P62333 389 aa12.19□□□□□ -0.46
CLP1-206ENST00000533905 ZNF697Q5TEC3 545 aa12.19□□□□□ -0.46
CLP1-206ENST00000533905 TAPT1Q6NXT6 567 aa12.19□□□□□ -0.46
CLP1-206ENST00000533905 SLC30A10Q6XR72 485 aa12.19□□□□□ -0.46
CLP1-206ENST00000533905 TBC1D10CQ8IV04 446 aa12.19□□□□□ -0.46
CLP1-206ENST00000533905 FAM126BQ8IXS8 530 aa12.19□□□□□ -0.46
CLP1-206ENST00000533905 ZNF444Q8N0Y2 327 aaPredicted RBP12.19□□□□□ -0.46
CLP1-206ENST00000533905 ANKRD35Q8N283 1001 aa12.19□□□□□ -0.46
CLP1-206ENST00000533905 NAPBQ9H115 298 aa12.19□□□□□ -0.46
CLP1-206ENST00000533905 IL25Q9H293 177 aa12.19□□□□□ -0.46
CLP1-206ENST00000533905 TMEM39AQ9NV64 488 aa12.19□□□□□ -0.46
CLP1-206ENST00000533905 CXXC1Q9P0U4 656 aaPredicted RBP12.19□□□□□ -0.46
CLP1-206ENST00000533905 FAM184BQ9ULE4 1060 aa12.19□□□□□ -0.46
CLP1-206ENST00000533905 PRR12Q9ULL5 1215 aa12.19□□□□□ -0.46
CLP1-206ENST00000533905 ISY1Q9ULR0 285 aaKnown RBP12.19□□□□□ -0.46
CLP1-206ENST00000533905 GNEQ9Y223 722 aaKnown RBP12.19□□□□□ -0.46
CLP1-206ENST00000533905 DUSP11O75319 330 aaKnown RBP12.18□□□□□ -0.46
CLP1-206ENST00000533905 ZFYP08048 801 aaPredicted RBP12.18□□□□□ -0.46
CLP1-206ENST00000533905 ALAS1P13196 640 aa12.18□□□□□ -0.46
CLP1-206ENST00000533905 RAG1P15918 1043 aa12.18□□□□□ -0.46
CLP1-206ENST00000533905 CST5P28325 142 aaPredicted RBP12.18□□□□□ -0.46
CLP1-206ENST00000533905 CYP2C18P33260 490 aa12.18□□□□□ -0.46
CLP1-206ENST00000533905 HAND2P61296 217 aa12.18□□□□□ -0.46
CLP1-206ENST00000533905 TMEM240Q5SV17 173 aa12.18□□□□□ -0.46
CLP1-206ENST00000533905 CXCL17Q6UXB2 119 aa12.18□□□□□ -0.46
CLP1-206ENST00000533905 ZNF467Q7Z7K2 595 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms