RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 PNMA8AQ86V59 439 aaPredicted RBP4.46□□□□□ -1.69
SOX6-217ENST00000533870 STMN2Q93045 179 aa4.46□□□□□ -1.69
SOX6-217ENST00000533870 ERGIC2Q96RQ1 377 aa4.46□□□□□ -1.69
SOX6-217ENST00000533870 FERMT1Q9BQL6 677 aa4.46□□□□□ -1.69
SOX6-217ENST00000533870 PHACTR1Q9C0D0 580 aa4.46□□□□□ -1.69
SOX6-217ENST00000533870 ANKRD2Q9GZV1 360 aa4.46□□□□□ -1.69
SOX6-217ENST00000533870 NRBP1Q9UHY1 535 aa4.46□□□□□ -1.69
SOX6-217ENST00000533870 DENND2AQ9ULE3 1009 aa4.46□□□□□ -1.69
SOX6-217ENST00000533870 ZFYVE16Q7Z3T8 1539 aa4.46□□□□□ -1.69
SOX6-217ENST00000533870 MAST3O60307 1309 aa4.46□□□□□ -1.69
SOX6-217ENST00000533870 NEURL1BA8MQ27 555 aa4.46□□□□□ -1.69
SOX6-217ENST00000533870 PODXLO00592 558 aa4.46□□□□□ -1.69
SOX6-217ENST00000533870 C21orf2O43822 256 aa4.46□□□□□ -1.69
SOX6-217ENST00000533870 GGPS1O95749 300 aa4.46□□□□□ -1.69
SOX6-217ENST00000533870 TROVE2P10155 538 aaKnown RBP eCLIP4.46□□□□□ -1.69
SOX6-217ENST00000533870 IRAK1P51617 712 aa4.46□□□□□ -1.69
SOX6-217ENST00000533870 NDUFA8P51970 172 aa4.46□□□□□ -1.69
SOX6-217ENST00000533870 DDR1Q08345 913 aa4.46□□□□□ -1.69
SOX6-217ENST00000533870 C6orf118Q5T5N4 469 aa4.46□□□□□ -1.69
SOX6-217ENST00000533870 P2RX5Q93086 422 aa4.46□□□□□ -1.69
SOX6-217ENST00000533870 CAVIN3Q969G5 261 aa4.46□□□□□ -1.69
SOX6-217ENST00000533870 THOC1Q96FV9 657 aaKnown RBP4.46□□□□□ -1.69
SOX6-217ENST00000533870 OLFM3Q96PB7 478 aa4.46□□□□□ -1.69
SOX6-217ENST00000533870 ROPN1BQ9BZX4 212 aaPredicted RBP4.46□□□□□ -1.69
SOX6-217ENST00000533870 CCSER1Q9C0I3 900 aa4.46□□□□□ -1.69
SOX6-217ENST00000533870 ROPN1Q9HAT0 212 aaPredicted RBP4.46□□□□□ -1.69
SOX6-217ENST00000533870 ARPP21Q9UBL0 812 aaPredicted RBP4.46□□□□□ -1.69
SOX6-217ENST00000533870 ATP8B3O60423 1300 aa4.46□□□□□ -1.7
SOX6-217ENST00000533870 CRB1P82279 1406 aa4.46□□□□□ -1.7
SOX6-217ENST00000533870 VWA3AA6NCI4 1184 aa4.46□□□□□ -1.7
SOX6-217ENST00000533870 MPHOSPH10O00566 681 aaKnown RBP4.46□□□□□ -1.7
SOX6-217ENST00000533870 RGS16O15492 202 aaPredicted RBP4.46□□□□□ -1.7
SOX6-217ENST00000533870 RAPGEF3O95398 923 aa4.46□□□□□ -1.7
SOX6-217ENST00000533870 MMP1P03956 469 aa4.46□□□□□ -1.7
SOX6-217ENST00000533870 CCND1P24385 295 aa4.46□□□□□ -1.7
SOX6-217ENST00000533870 SCRN1Q12765 414 aa4.46□□□□□ -1.7
SOX6-217ENST00000533870 NT5DC1Q5TFE4 455 aa4.46□□□□□ -1.7
SOX6-217ENST00000533870 TC2NQ8N9U0 490 aa4.46□□□□□ -1.7
SOX6-217ENST00000533870 CTTNBP2NLQ9P2B4 639 aa4.46□□□□□ -1.7
SOX6-217ENST00000533870 LRWD1Q9UFC0 647 aa4.46□□□□□ -1.7
SOX6-217ENST00000533870 UTP11Q9Y3A2 253 aaKnown RBP4.46□□□□□ -1.7
SOX6-217ENST00000533870 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.46□□□□□ -1.7
SOX6-217ENST00000533870 ADGBQ8N7X0 1667 aa4.46□□□□□ -1.7
SOX6-217ENST00000533870 ERVV-2B6SEH9 535 aa4.46□□□□□ -1.7
SOX6-217ENST00000533870 H0YCG3 227 aa4.46□□□□□ -1.7
SOX6-217ENST00000533870 SH2B2O14492 632 aaPredicted RBP4.46□□□□□ -1.7
SOX6-217ENST00000533870 TFCP2Q12800 502 aa4.46□□□□□ -1.7
SOX6-217ENST00000533870 ALCAMQ13740 583 aa4.46□□□□□ -1.7
SOX6-217ENST00000533870 AOC3Q16853 763 aa4.46□□□□□ -1.7
SOX6-217ENST00000533870 SDCCAG8Q86SQ7 713 aaPredicted RBP4.46□□□□□ -1.7
SOX6-217ENST00000533870 UNC5CLQ8IV45 518 aa4.46□□□□□ -1.7
SOX6-217ENST00000533870 AGGF1Q8N302 714 aaeCLIP4.46□□□□□ -1.7
SOX6-217ENST00000533870 PLAGL2Q9UPG8 496 aa4.46□□□□□ -1.7
SOX6-217ENST00000533870 PNPLA7Q6ZV29 1317 aa4.46□□□□□ -1.7
SOX6-217ENST00000533870 PASKQ96RG2 1323 aa4.46□□□□□ -1.7
SOX6-217ENST00000533870 RAD21O60216 631 aa4.46□□□□□ -1.7
SOX6-217ENST00000533870 DKC1O60832 514 aaKnown RBP eCLIP4.46□□□□□ -1.7
SOX6-217ENST00000533870 CIB2O75838 187 aa4.46□□□□□ -1.7
SOX6-217ENST00000533870 ZNF18P17022 549 aa4.46□□□□□ -1.7
SOX6-217ENST00000533870 CDKAL1Q5VV42 579 aa4.46□□□□□ -1.7
SOX6-217ENST00000533870 TSHZ3Q63HK5 1081 aa4.46□□□□□ -1.7
SOX6-217ENST00000533870 PPP1R18Q6NYC8 613 aa4.46□□□□□ -1.7
SOX6-217ENST00000533870 CRACR2BQ8N4Y2 399 aaPredicted RBP4.46□□□□□ -1.7
SOX6-217ENST00000533870 ZC3H15Q8WU90 426 aaKnown RBP4.46□□□□□ -1.7
SOX6-217ENST00000533870 DNAJC7Q99615 494 aa4.46□□□□□ -1.7
SOX6-217ENST00000533870 MMRN2Q9H8L6 949 aa4.46□□□□□ -1.7
SOX6-217ENST00000533870 ATP8A2Q9NTI2 1148 aa4.46□□□□□ -1.7
SOX6-217ENST00000533870 CEMIPQ8WUJ3 1361 aa4.46□□□□□ -1.7
SOX6-217ENST00000533870 PRDM2Q13029 1718 aa4.46□□□□□ -1.7
SOX6-217ENST00000533870 IPO5O00410 1097 aaKnown RBP4.46□□□□□ -1.7
SOX6-217ENST00000533870 FAM26FQ5R3K3 315 aa4.46□□□□□ -1.7
SOX6-217ENST00000533870 CADPS2Q86UW7 1296 aa4.46□□□□□ -1.7
SOX6-217ENST00000533870 ZNF526Q8TF50 670 aaPredicted RBP4.46□□□□□ -1.7
SOX6-217ENST00000533870 KLHL29Q96CT2 875 aa4.46□□□□□ -1.7
SOX6-217ENST00000533870 IQCGQ9H095 443 aaKnown RBP4.46□□□□□ -1.7
SOX6-217ENST00000533870 USP40Q9NVE5 1235 aa4.46□□□□□ -1.7
SOX6-217ENST00000533870 FAM53CQ9NYF3 392 aa4.46□□□□□ -1.7
SOX6-217ENST00000533870 VWDEQ8N2E2 1590 aa4.46□□□□□ -1.7
SOX6-217ENST00000533870 PATL2C9JE40 543 aaKnown RBP4.45□□□□□ -1.7
SOX6-217ENST00000533870 LIN7AO14910 233 aaPredicted RBP4.45□□□□□ -1.7
SOX6-217ENST00000533870 THAP12O43422 761 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 ATP5BP06576 529 aaKnown RBP4.45□□□□□ -1.7
SOX6-217ENST00000533870 PCK1P35558 622 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 GUCY1B3Q02153 619 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 FAM69CQ0P6D2 419 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 PUM3Q15397 648 aaKnown RBP4.45□□□□□ -1.7
SOX6-217ENST00000533870 NBPF6Q5VWK0 638 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 ZNF654Q8IZM8 581 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 NELFBQ8WX92 580 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 CHMP6Q96FZ7 201 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 PGM2Q96G03 612 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 NBPF4Q96M43 638 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 BRIP1Q9BX63 1249 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 TMX1Q9H3N1 280 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 TAB2Q9NYJ8 693 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 AMFRQ9UKV5 643 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 ESYT2A0FGR8 921 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 SCP2P22307 547 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 NPEPPSP55786 919 aa4.45□□□□□ -1.7
SOX6-217ENST00000533870 BPIFB4P59827 614 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms