RNA–Protein interactions for RNA: ENST00000533834.1

RNPC3-209, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 1 (best)

Gene RNPC3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-209ENST00000533834 PDCL2Q8N4E4 241 aa8.11□□□□□ -1.11
RNPC3-209ENST00000533834 MSL3Q8N5Y2 521 aaKnown RBP8.11□□□□□ -1.11
RNPC3-209ENST00000533834 GPKOWQ92917 476 aaPredicted RBP eCLIP8.11□□□□□ -1.11
RNPC3-209ENST00000533834 GJD4Q96KN9 370 aaPredicted RBP8.11□□□□□ -1.11
RNPC3-209ENST00000533834 SETDB2Q96T68 719 aa8.11□□□□□ -1.11
RNPC3-209ENST00000533834 C7orf25Q9BPX7 421 aa8.11□□□□□ -1.11
RNPC3-209ENST00000533834 IRX2Q9BZI1 471 aaPredicted RBP8.11□□□□□ -1.11
RNPC3-209ENST00000533834 OGFRQ9NZT2 677 aa8.11□□□□□ -1.11
RNPC3-209ENST00000533834 RAB21Q9UL25 225 aa8.11□□□□□ -1.11
RNPC3-209ENST00000533834 MAP2K7O14733 419 aa8.11□□□□□ -1.11
RNPC3-209ENST00000533834 TBC1D8O95759 1140 aa8.11□□□□□ -1.11
RNPC3-209ENST00000533834 SFPQP23246 707 aaKnown RBP eCLIP8.11□□□□□ -1.11
RNPC3-209ENST00000533834 CLCN6P51797 869 aa8.11□□□□□ -1.11
RNPC3-209ENST00000533834 HERVK_113P62684 666 aa8.11□□□□□ -1.11
RNPC3-209ENST00000533834 TFAP4Q01664 338 aa8.11□□□□□ -1.11
RNPC3-209ENST00000533834 PIK3AP1Q6ZUJ8 805 aa8.11□□□□□ -1.11
RNPC3-209ENST00000533834 ZNF397Q8NF99 534 aaPredicted RBP8.11□□□□□ -1.11
RNPC3-209ENST00000533834 DHX58Q96C10 678 aa8.11□□□□□ -1.11
RNPC3-209ENST00000533834 CRAMP1Q96RY5 1269 aa8.11□□□□□ -1.11
RNPC3-209ENST00000533834 ABHD10Q9NUJ1 306 aa8.11□□□□□ -1.11
RNPC3-209ENST00000533834 DNAI1Q9UI46 699 aa8.11□□□□□ -1.11
RNPC3-209ENST00000533834 NENFQ9UMX5 172 aa8.11□□□□□ -1.11
RNPC3-209ENST00000533834 GDAQ9Y2T3 454 aa8.11□□□□□ -1.11
RNPC3-209ENST00000533834 A0A1W2PQC6 194 aa8.11□□□□□ -1.11
RNPC3-209ENST00000533834 ZNF263O14978 683 aa8.11□□□□□ -1.11
RNPC3-209ENST00000533834 CBFA2T2O43439 604 aa8.11□□□□□ -1.11
RNPC3-209ENST00000533834 SMC2O95347 1197 aa8.11□□□□□ -1.11
RNPC3-209ENST00000533834 PDHBP11177 359 aa8.11□□□□□ -1.11
RNPC3-209ENST00000533834 CDK8P49336 464 aa8.11□□□□□ -1.11
RNPC3-209ENST00000533834 SPIRE1Q08AE8 756 aa8.11□□□□□ -1.11
RNPC3-209ENST00000533834 GRB10Q13322 594 aa8.11□□□□□ -1.11
RNPC3-209ENST00000533834 ORC2Q13416 577 aaPredicted RBP8.11□□□□□ -1.11
RNPC3-209ENST00000533834 ASTE1Q2TB18 679 aaPredicted RBP8.11□□□□□ -1.11
RNPC3-209ENST00000533834 MSANTD4Q8NCY6 345 aa8.11□□□□□ -1.11
RNPC3-209ENST00000533834 WDR66Q8TBY9 1149 aa8.11□□□□□ -1.11
RNPC3-209ENST00000533834 RASGRP4Q8TDF6 673 aa8.11□□□□□ -1.11
RNPC3-209ENST00000533834 BAG1Q99933 345 aaPredicted RBP8.11□□□□□ -1.11
RNPC3-209ENST00000533834 CCNL1Q9UK58 526 aaPredicted RBP8.11□□□□□ -1.11
RNPC3-209ENST00000533834 BHMG1C9JSJ3 638 aaPredicted RBP8.1□□□□□ -1.11
RNPC3-209ENST00000533834 LAD1O00515 517 aa8.1□□□□□ -1.11
RNPC3-209ENST00000533834 MYL1P05976 194 aa8.1□□□□□ -1.11
RNPC3-209ENST00000533834 CDC25AP30304 524 aa8.1□□□□□ -1.11
RNPC3-209ENST00000533834 SHMT1P34896 483 aa8.1□□□□□ -1.11
RNPC3-209ENST00000533834 TRIM29Q14134 588 aa8.1□□□□□ -1.11
RNPC3-209ENST00000533834 ERCC6LQ2NKX8 1250 aa8.1□□□□□ -1.11
RNPC3-209ENST00000533834 FAM182BQ5T319 152 aa8.1□□□□□ -1.11
RNPC3-209ENST00000533834 TPTE2Q6XPS3 522 aa8.1□□□□□ -1.11
RNPC3-209ENST00000533834 CGNQ9P2M7 1197 aaKnown RBP8.1□□□□□ -1.11
RNPC3-209ENST00000533834 FRMD3A2A2Y4 597 aa8.1□□□□□ -1.11
RNPC3-209ENST00000533834 RCCD1A6NED2 376 aa8.1□□□□□ -1.11
RNPC3-209ENST00000533834 RPN1P04843 607 aaKnown RBP8.1□□□□□ -1.11
RNPC3-209ENST00000533834 IQCA1Q86XH1 822 aa8.1□□□□□ -1.11
RNPC3-209ENST00000533834 NUP133Q8WUM0 1156 aa8.1□□□□□ -1.11
RNPC3-209ENST00000533834 HAS1Q92839 578 aa8.1□□□□□ -1.11
RNPC3-209ENST00000533834 NAA15Q9BXJ9 866 aaKnown RBP8.1□□□□□ -1.11
RNPC3-209ENST00000533834 SIK3Q9Y2K2 1263 aa8.1□□□□□ -1.11
RNPC3-209ENST00000533834 DAGLAQ9Y4D2 1042 aa8.1□□□□□ -1.11
RNPC3-209ENST00000533834 POTEMA6NI47 508 aa8.1□□□□□ -1.11
RNPC3-209ENST00000533834 OPLAHO14841 1288 aa8.1□□□□□ -1.11
RNPC3-209ENST00000533834 MMP14P50281 582 aa8.1□□□□□ -1.11
RNPC3-209ENST00000533834 SH3BP5LQ7L8J4 393 aa8.1□□□□□ -1.11
RNPC3-209ENST00000533834 NBPF5PQ86XG9 351 aaPredicted RBP8.1□□□□□ -1.11
RNPC3-209ENST00000533834 SEMA6BQ9H3T3 888 aa8.1□□□□□ -1.11
RNPC3-209ENST00000533834 COL11A1P12107 1806 aaPredicted RBP8.1□□□□□ -1.11
RNPC3-209ENST00000533834 C19orf67A6NJJ6 358 aa8.09□□□□□ -1.11
RNPC3-209ENST00000533834 TFRCP02786 760 aaKnown RBP8.09□□□□□ -1.11
RNPC3-209ENST00000533834 LRRC55Q6ZSA7 311 aa8.09□□□□□ -1.11
RNPC3-209ENST00000533834 FAM196AQ6ZSG2 479 aa8.09□□□□□ -1.11
RNPC3-209ENST00000533834 CEP95Q96GE4 821 aa8.09□□□□□ -1.11
RNPC3-209ENST00000533834 BLZF1Q9H2G9 400 aa8.09□□□□□ -1.11
RNPC3-209ENST00000533834 PGAP2Q9UHJ9 254 aa8.09□□□□□ -1.11
RNPC3-209ENST00000533834 TRIM49BA6NDI0 452 aa8.09□□□□□ -1.11
RNPC3-209ENST00000533834 EFCAB8A8MWE9 144 aa8.09□□□□□ -1.11
RNPC3-209ENST00000533834 SLC37A4O43826 429 aa8.09□□□□□ -1.11
RNPC3-209ENST00000533834 COBLO75128 1261 aa8.09□□□□□ -1.11
RNPC3-209ENST00000533834 SRGNP10124 158 aa8.09□□□□□ -1.11
RNPC3-209ENST00000533834 CDK17Q00537 523 aa8.09□□□□□ -1.11
RNPC3-209ENST00000533834 KARSQ15046 597 aaKnown RBP8.09□□□□□ -1.11
RNPC3-209ENST00000533834 FIGNQ5HY92 759 aa8.09□□□□□ -1.11
RNPC3-209ENST00000533834 CENPPQ6IPU0 288 aa8.09□□□□□ -1.11
RNPC3-209ENST00000533834 DNAJC19Q96DA6 116 aa8.09□□□□□ -1.11
RNPC3-209ENST00000533834 TRIM9Q9C026 710 aa8.09□□□□□ -1.11
RNPC3-209ENST00000533834 ZMYND15Q9H091 742 aa8.09□□□□□ -1.11
RNPC3-209ENST00000533834 ST7Q9NRC1 585 aa8.09□□□□□ -1.11
RNPC3-209ENST00000533834 RTCBQ9Y3I0 505 aaKnown RBP8.09□□□□□ -1.11
RNPC3-209ENST00000533834 UTRNP46939 3433 aa8.09□□□□□ -1.11
RNPC3-209ENST00000533834 ERICH2A1L162 156 aa8.09□□□□□ -1.11
RNPC3-209ENST00000533834 LGALS16A8MUM7 142 aa8.09□□□□□ -1.11
RNPC3-209ENST00000533834 CASP14P31944 242 aa8.09□□□□□ -1.11
RNPC3-209ENST00000533834 COPB1P53618 953 aaKnown RBP8.09□□□□□ -1.11
RNPC3-209ENST00000533834 JAG1P78504 1218 aa8.09□□□□□ -1.11
RNPC3-209ENST00000533834 APOBEC3HQ6NTF7 200 aaKnown RBP8.09□□□□□ -1.11
RNPC3-209ENST00000533834 KCNK18Q7Z418 384 aa8.09□□□□□ -1.11
RNPC3-209ENST00000533834 DRC7Q8IY82 874 aa8.09□□□□□ -1.11
RNPC3-209ENST00000533834 C7orf43Q8WVR3 580 aa8.09□□□□□ -1.11
RNPC3-209ENST00000533834 LENG9Q96B70 501 aa8.09□□□□□ -1.11
RNPC3-209ENST00000533834 NUDT12Q9BQG2 462 aa8.09□□□□□ -1.11
RNPC3-209ENST00000533834 THAP9Q9H5L6 903 aa8.09□□□□□ -1.11
RNPC3-209ENST00000533834 MTMR4Q9NYA4 1195 aa8.09□□□□□ -1.11
RNPC3-209ENST00000533834 CAPN11Q9UMQ6 739 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms