RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 WNT8AQ9H1J5 351 aa14.9□□□□□ -0.02
SVIP-205ENST00000533774 CD320Q9NPF0 282 aa14.9□□□□□ -0.02
SVIP-205ENST00000533774 TRIP12Q14669 1992 aaPredicted RBP14.9□□□□□ -0.02
SVIP-205ENST00000533774 LCTP09848 1927 aa14.9□□□□□ -0.02
SVIP-205ENST00000533774 MYH7P12883 1935 aa14.9□□□□□ -0.02
SVIP-205ENST00000533774 CYP2D7A0A087X1C5 515 aa14.89□□□□□ -0.03
SVIP-205ENST00000533774 TLR3O15455 904 aaKnown RBP14.89□□□□□ -0.03
SVIP-205ENST00000533774 GPR37L1O60883 481 aa14.89□□□□□ -0.03
SVIP-205ENST00000533774 CT47B1P0C2W7 299 aaPredicted RBP14.89□□□□□ -0.03
SVIP-205ENST00000533774 POU3F3P20264 500 aaPredicted RBP14.89□□□□□ -0.03
SVIP-205ENST00000533774 ATP8B2P98198 1209 aa14.89□□□□□ -0.03
SVIP-205ENST00000533774 AAK1Q2M2I8 961 aa14.89□□□□□ -0.03
SVIP-205ENST00000533774 FAM83BQ5T0W9 1011 aa14.89□□□□□ -0.03
SVIP-205ENST00000533774 LCORLQ8N3X6 602 aa14.89□□□□□ -0.03
SVIP-205ENST00000533774 NOC4LQ9BVI4 516 aaKnown RBP14.89□□□□□ -0.03
SVIP-205ENST00000533774 CRNKL1Q9BZJ0 848 aaKnown RBP14.89□□□□□ -0.03
SVIP-205ENST00000533774 KATNBL1Q9H079 304 aa14.89□□□□□ -0.03
SVIP-205ENST00000533774 HIPK3Q9H422 1215 aa14.89□□□□□ -0.03
SVIP-205ENST00000533774 CERS4Q9HA82 394 aa14.89□□□□□ -0.03
SVIP-205ENST00000533774 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.89□□□□□ -0.03
SVIP-205ENST00000533774 PCDHA11Q9Y5I1 949 aa14.89□□□□□ -0.03
SVIP-205ENST00000533774 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.88□□□□□ -0.03
SVIP-205ENST00000533774 TCRBV5S4A2TA0A5A2 114 aa14.88□□□□□ -0.03
SVIP-205ENST00000533774 PRKAB2O43741 272 aa14.88□□□□□ -0.03
SVIP-205ENST00000533774 PDE6AP16499 860 aa14.88□□□□□ -0.03
SVIP-205ENST00000533774 SLFNL1Q499Z3 407 aa14.88□□□□□ -0.03
SVIP-205ENST00000533774 PLCD3Q8N3E9 789 aa14.88□□□□□ -0.03
SVIP-205ENST00000533774 NUP88Q99567 741 aaPredicted RBP14.88□□□□□ -0.03
SVIP-205ENST00000533774 TRPV6Q9H1D0 765 aa14.88□□□□□ -0.03
SVIP-205ENST00000533774 NOP58Q9Y2X3 529 aaKnown RBP14.88□□□□□ -0.03
SVIP-205ENST00000533774 SLC4A7Q9Y6M7 1214 aa14.88□□□□□ -0.03
SVIP-205ENST00000533774 CDK8P49336 464 aa14.87□□□□□ -0.03
SVIP-205ENST00000533774 NKX3-2P78367 333 aa14.87□□□□□ -0.03
SVIP-205ENST00000533774 TTLL4Q14679 1199 aa14.87□□□□□ -0.03
SVIP-205ENST00000533774 SNRNP48Q6IEG0 339 aaKnown RBP14.87□□□□□ -0.03
SVIP-205ENST00000533774 CXCL17Q6UXB2 119 aa14.87□□□□□ -0.03
SVIP-205ENST00000533774 SPRED2Q7Z698 418 aa14.87□□□□□ -0.03
SVIP-205ENST00000533774 CLUAP1Q96AJ1 413 aa14.87□□□□□ -0.03
SVIP-205ENST00000533774 DDX11Q96FC9 970 aa14.87□□□□□ -0.03
SVIP-205ENST00000533774 SCLYQ96I15 445 aa14.87□□□□□ -0.03
SVIP-205ENST00000533774 AGBL1Q96MI9 1066 aa14.87□□□□□ -0.03
SVIP-205ENST00000533774 MTIF3Q9H2K0 278 aaKnown RBP14.87□□□□□ -0.03
SVIP-205ENST00000533774 SH2D4AQ9H788 454 aa14.87□□□□□ -0.03
SVIP-205ENST00000533774 C1orf115Q9H7X2 142 aa14.87□□□□□ -0.03
SVIP-205ENST00000533774 SWAP70Q9UH65 585 aa14.87□□□□□ -0.03
SVIP-205ENST00000533774 ZNF532Q9HCE3 1301 aa14.87□□□□□ -0.03
SVIP-205ENST00000533774 B4GALT4O60513 344 aa14.86□□□□□ -0.03
SVIP-205ENST00000533774 CA3P07451 260 aa14.86□□□□□ -0.03
SVIP-205ENST00000533774 COPB2P35606 906 aa14.86□□□□□ -0.03
SVIP-205ENST00000533774 SLC9C2Q5TAH2 1124 aa14.86□□□□□ -0.03
SVIP-205ENST00000533774 ARMCX2Q7L311 632 aa14.86□□□□□ -0.03
SVIP-205ENST00000533774 ZNF467Q7Z7K2 595 aaPredicted RBP14.86□□□□□ -0.03
SVIP-205ENST00000533774 MIER1Q8N108 512 aa14.86□□□□□ -0.03
SVIP-205ENST00000533774 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.86□□□□□ -0.03
SVIP-205ENST00000533774 ABHD16BQ9H3Z7 469 aa14.86□□□□□ -0.03
SVIP-205ENST00000533774 ARMT1Q9H993 441 aa14.86□□□□□ -0.03
SVIP-205ENST00000533774 WDFY4Q6ZS81 3184 aa14.85□□□□□ -0.03
SVIP-205ENST00000533774 TANC1Q9C0D5 1861 aa14.85□□□□□ -0.03
SVIP-205ENST00000533774 ZBBXA8MT70 800 aa14.85□□□□□ -0.03
SVIP-205ENST00000533774 ATP2A2P16615 1042 aaKnown RBP14.85□□□□□ -0.03
SVIP-205ENST00000533774 TMEM63BQ5T3F8 832 aa14.85□□□□□ -0.03
SVIP-205ENST00000533774 TMED8Q6PL24 325 aaPredicted RBP14.85□□□□□ -0.03
SVIP-205ENST00000533774 TMEM57Q8N5G2 664 aa14.85□□□□□ -0.03
SVIP-205ENST00000533774 TEX13BQ9BXU2 312 aa14.85□□□□□ -0.03
SVIP-205ENST00000533774 SPC25Q9HBM1 224 aa14.85□□□□□ -0.03
SVIP-205ENST00000533774 DDX49Q9Y6V7 483 aaKnown RBP14.85□□□□□ -0.03
SVIP-205ENST00000533774 PI4K2BG5E9Z4 385 aa14.84□□□□□ -0.03
SVIP-205ENST00000533774 RAD21O60216 631 aa14.84□□□□□ -0.03
SVIP-205ENST00000533774 CHGBP05060 677 aa14.84□□□□□ -0.03
SVIP-205ENST00000533774 SLC4A3P48751 1232 aa14.84□□□□□ -0.03
SVIP-205ENST00000533774 PSMC6P62333 389 aa14.84□□□□□ -0.03
SVIP-205ENST00000533774 CNTN2Q02246 1040 aa14.84□□□□□ -0.03
SVIP-205ENST00000533774 ITGA7Q13683 1181 aa14.84□□□□□ -0.03
SVIP-205ENST00000533774 C12orf60Q5U649 245 aa14.84□□□□□ -0.03
SVIP-205ENST00000533774 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.84□□□□□ -0.03
SVIP-205ENST00000533774 CCDC144CPQ8IYA2 1237 aa14.84□□□□□ -0.03
SVIP-205ENST00000533774 CCDC17Q96LX7 622 aa14.84□□□□□ -0.03
SVIP-205ENST00000533774 SLF1Q9BQI6 1058 aa14.84□□□□□ -0.03
SVIP-205ENST00000533774 COG5Q9UP83 839 aa14.84□□□□□ -0.03
SVIP-205ENST00000533774 GNEQ9Y223 722 aaKnown RBP14.84□□□□□ -0.03
SVIP-205ENST00000533774 LPXNO60711 386 aa14.83□□□□□ -0.04
SVIP-205ENST00000533774 TAP1Q03518 808 aa14.83□□□□□ -0.04
SVIP-205ENST00000533774 TMEM67Q5HYA8 995 aa14.83□□□□□ -0.04
SVIP-205ENST00000533774 C16orf86Q6ZW13 317 aa14.83□□□□□ -0.04
SVIP-205ENST00000533774 CPXCR1Q8N123 301 aa14.83□□□□□ -0.04
SVIP-205ENST00000533774 KANSL2Q9H9L4 492 aa14.83□□□□□ -0.04
SVIP-205ENST00000533774 RAVER2Q9HCJ3 691 aaKnown RBP14.83□□□□□ -0.04
SVIP-205ENST00000533774 GOPCQ9HD26 462 aa14.83□□□□□ -0.04
SVIP-205ENST00000533774 SCN10AQ9Y5Y9 1956 aa14.83□□□□□ -0.04
SVIP-205ENST00000533774 ZNF318Q5VUA4 2279 aa14.82□□□□□ -0.04
SVIP-205ENST00000533774 USP17L12C9JPN9 530 aa14.82□□□□□ -0.04
SVIP-205ENST00000533774 USP17L21D6R901 530 aa14.82□□□□□ -0.04
SVIP-205ENST00000533774 RBAK-RBAKDNI3L0D1 243 aa14.82□□□□□ -0.04
SVIP-205ENST00000533774 ATP2A1O14983 1001 aa14.82□□□□□ -0.04
SVIP-205ENST00000533774 GTPBP6O43824 516 aaPredicted RBP14.82□□□□□ -0.04
SVIP-205ENST00000533774 TNFAIP2Q03169 654 aa14.82□□□□□ -0.04
SVIP-205ENST00000533774 GRB10Q13322 594 aa14.82□□□□□ -0.04
SVIP-205ENST00000533774 AACSQ86V21 672 aa14.82□□□□□ -0.04
SVIP-205ENST00000533774 ARNTL2Q8WYA1 636 aa14.82□□□□□ -0.04
SVIP-205ENST00000533774 FRAT1Q92837 279 aaPredicted RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms