RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 RASSF8Q8NHQ8 419 aa13.48□□□□□ -0.25
ATM-222ENST00000533733 NELFBQ8WX92 580 aa13.48□□□□□ -0.25
ATM-222ENST00000533733 IQCDQ96DY2 449 aa13.48□□□□□ -0.25
ATM-222ENST00000533733 DHTKD1Q96HY7 919 aaPredicted RBP13.48□□□□□ -0.25
ATM-222ENST00000533733 THAP9Q9H5L6 903 aa13.48□□□□□ -0.25
ATM-222ENST00000533733 RIOX1Q9H6W3 641 aa13.48□□□□□ -0.25
ATM-222ENST00000533733 ARGLU1Q9NWB6 273 aaPredicted RBP13.48□□□□□ -0.25
ATM-222ENST00000533733 TTF2Q9UNY4 1162 aaKnown RBP13.48□□□□□ -0.25
ATM-222ENST00000533733 MYH4Q9Y623 1939 aa13.48□□□□□ -0.25
ATM-222ENST00000533733 A0A1W2PQC6 194 aa13.47□□□□□ -0.25
ATM-222ENST00000533733 BICDL2A1A5D9 508 aa13.47□□□□□ -0.25
ATM-222ENST00000533733 PSMA7O14818 248 aa13.47□□□□□ -0.25
ATM-222ENST00000533733 N4BP3O15049 544 aa13.47□□□□□ -0.25
ATM-222ENST00000533733 CASQ1P31415 396 aa13.47□□□□□ -0.25
ATM-222ENST00000533733 COPB1P53618 953 aaKnown RBP13.47□□□□□ -0.25
ATM-222ENST00000533733 TCP11X2Q5H9J9 407 aa13.47□□□□□ -0.25
ATM-222ENST00000533733 FAM114A1Q8IWE2 563 aa13.47□□□□□ -0.25
ATM-222ENST00000533733 SEPT12Q8IYM1 358 aa13.47□□□□□ -0.25
ATM-222ENST00000533733 ADSSL1Q8N142 457 aa13.47□□□□□ -0.25
ATM-222ENST00000533733 MNS1Q8NEH6 495 aa13.47□□□□□ -0.25
ATM-222ENST00000533733 RAB34Q9BZG1 259 aa13.47□□□□□ -0.25
ATM-222ENST00000533733 LRRC27Q9C0I9 530 aa13.47□□□□□ -0.25
ATM-222ENST00000533733 LRRC4BQ9NT99 713 aa13.47□□□□□ -0.25
ATM-222ENST00000533733 SMCO2A6NFE2 343 aa13.47□□□□□ -0.25
ATM-222ENST00000533733 ADKP55263 362 aaKnown RBP13.47□□□□□ -0.25
ATM-222ENST00000533733 STX17P56962 302 aa13.47□□□□□ -0.25
ATM-222ENST00000533733 KRT31Q15323 416 aa13.47□□□□□ -0.25
ATM-222ENST00000533733 GRIK5Q16478 980 aa13.47□□□□□ -0.25
ATM-222ENST00000533733 INF2Q27J81 1249 aa13.47□□□□□ -0.25
ATM-222ENST00000533733 TYW1BQ6NUM6 668 aa13.47□□□□□ -0.25
ATM-222ENST00000533733 RASGRP2Q7LDG7 609 aa13.47□□□□□ -0.25
ATM-222ENST00000533733 GIMAP8Q8ND71 665 aaPredicted RBP13.47□□□□□ -0.25
ATM-222ENST00000533733 NAP1L4Q99733 375 aaKnown RBP13.47□□□□□ -0.25
ATM-222ENST00000533733 GLT8D2Q9H1C3 349 aa13.47□□□□□ -0.25
ATM-222ENST00000533733 MYO1AQ9UBC5 1043 aa13.47□□□□□ -0.25
ATM-222ENST00000533733 SAP30BPQ9UHR5 308 aaKnown RBP13.47□□□□□ -0.25
ATM-222ENST00000533733 AFF2P51816 1311 aa13.46□□□□□ -0.25
ATM-222ENST00000533733 KCNJ18B7U540 433 aa13.46□□□□□ -0.25
ATM-222ENST00000533733 PPEF1O14829 653 aaPredicted RBP13.46□□□□□ -0.25
ATM-222ENST00000533733 SLC26A4O43511 780 aa13.46□□□□□ -0.25
ATM-222ENST00000533733 SNHG28P0DPA3 235 aa13.46□□□□□ -0.25
ATM-222ENST00000533733 VEGFAP15692 232 aaPredicted RBP13.46□□□□□ -0.25
ATM-222ENST00000533733 RBL2Q08999 1139 aa13.46□□□□□ -0.25
ATM-222ENST00000533733 KCNJ12Q14500 433 aa13.46□□□□□ -0.25
ATM-222ENST00000533733 KARSQ15046 597 aaKnown RBP13.46□□□□□ -0.25
ATM-222ENST00000533733 NAALADL2Q58DX5 795 aa13.46□□□□□ -0.25
ATM-222ENST00000533733 CABP7Q86V35 215 aa13.46□□□□□ -0.25
ATM-222ENST00000533733 REXO1Q8N1G1 1221 aaKnown RBP13.46□□□□□ -0.25
ATM-222ENST00000533733 UBXN4Q92575 508 aa13.46□□□□□ -0.25
ATM-222ENST00000533733 CALML4Q96GE6 196 aa13.46□□□□□ -0.25
ATM-222ENST00000533733 MTRQ99707 1265 aa13.46□□□□□ -0.25
ATM-222ENST00000533733 BLZF1Q9H2G9 400 aa13.46□□□□□ -0.25
ATM-222ENST00000533733 DDX41Q9UJV9 622 aaKnown RBP13.46□□□□□ -0.25
ATM-222ENST00000533733 ATP6V0A2Q9Y487 856 aa13.46□□□□□ -0.25
ATM-222ENST00000533733 POLRMTO00411 1230 aaKnown RBP13.45□□□□□ -0.26
ATM-222ENST00000533733 TEX33O43247 280 aa13.45□□□□□ -0.26
ATM-222ENST00000533733 ALDH1B1P30837 517 aa13.45□□□□□ -0.26
ATM-222ENST00000533733 GABPAQ06546 454 aa13.45□□□□□ -0.26
ATM-222ENST00000533733 TMEM266Q2M3C6 531 aa13.45□□□□□ -0.26
ATM-222ENST00000533733 HSP90AA4PQ58FG1 418 aa13.45□□□□□ -0.26
ATM-222ENST00000533733 CYP26C1Q6V0L0 522 aa13.45□□□□□ -0.26
ATM-222ENST00000533733 SLC44A5Q8NCS7 719 aa13.45□□□□□ -0.26
ATM-222ENST00000533733 CEP95Q96GE4 821 aa13.45□□□□□ -0.26
ATM-222ENST00000533733 C7orf25Q9BPX7 421 aa13.45□□□□□ -0.26
ATM-222ENST00000533733 TMX4Q9H1E5 349 aaPredicted RBP13.45□□□□□ -0.26
ATM-222ENST00000533733 MAGEC2Q9UBF1 373 aaPredicted RBP13.45□□□□□ -0.26
ATM-222ENST00000533733 STK17AQ9UEE5 414 aa13.45□□□□□ -0.26
ATM-222ENST00000533733 POLLQ9UGP5 575 aa13.45□□□□□ -0.26
ATM-222ENST00000533733 DAGLAQ9Y4D2 1042 aa13.45□□□□□ -0.26
ATM-222ENST00000533733 PARP3Q9Y6F1 533 aa13.45□□□□□ -0.26
ATM-222ENST00000533733 IGKV6D-41A0A0C4DH26 115 aa13.44□□□□□ -0.26
ATM-222ENST00000533733 C6orf229H3BNL8 230 aa13.44□□□□□ -0.26
ATM-222ENST00000533733 ATP8B1O43520 1251 aa13.44□□□□□ -0.26
ATM-222ENST00000533733 KIF5CO60282 957 aa13.44□□□□□ -0.26
ATM-222ENST00000533733 URI1O94763 535 aaPredicted RBP13.44□□□□□ -0.26
ATM-222ENST00000533733 CASP1P29466 404 aa13.44□□□□□ -0.26
ATM-222ENST00000533733 PRCPP42785 496 aa13.44□□□□□ -0.26
ATM-222ENST00000533733 GNG11P61952 73 aa13.44□□□□□ -0.26
ATM-222ENST00000533733 FAM193AP78312 1265 aa13.44□□□□□ -0.26
ATM-222ENST00000533733 MAP3K9P80192 1104 aa13.44□□□□□ -0.26
ATM-222ENST00000533733 ELF2Q15723 593 aa13.44□□□□□ -0.26
ATM-222ENST00000533733 SLC35G1Q2M3R5 365 aa13.44□□□□□ -0.26
ATM-222ENST00000533733 GPATCH4Q5T3I0 446 aaKnown RBP13.44□□□□□ -0.26
ATM-222ENST00000533733 FOXR2Q6PJQ5 311 aa13.44□□□□□ -0.26
ATM-222ENST00000533733 HHIPL2Q6UWX4 724 aa13.44□□□□□ -0.26
ATM-222ENST00000533733 RETREG2Q8NC44 543 aa13.44□□□□□ -0.26
ATM-222ENST00000533733 RASGRP4Q8TDF6 673 aa13.44□□□□□ -0.26
ATM-222ENST00000533733 NUP58Q9BVL2 599 aa13.44□□□□□ -0.26
ATM-222ENST00000533733 TMEM60Q9H2L4 133 aa13.44□□□□□ -0.26
ATM-222ENST00000533733 MTMR4Q9NYA4 1195 aa13.44□□□□□ -0.26
ATM-222ENST00000533733 ADGRG1Q9Y653 693 aa13.44□□□□□ -0.26
ATM-222ENST00000533733 BRWD3Q6RI45 1802 aa13.44□□□□□ -0.26
ATM-222ENST00000533733 KLRC4O43908 158 aa13.44□□□□□ -0.26
ATM-222ENST00000533733 CCNT1O60563 726 aaKnown RBP13.44□□□□□ -0.26
ATM-222ENST00000533733 GYPCP04921 128 aa13.44□□□□□ -0.26
ATM-222ENST00000533733 PDHBP11177 359 aa13.44□□□□□ -0.26
ATM-222ENST00000533733 NPR1P16066 1061 aa13.44□□□□□ -0.26
ATM-222ENST00000533733 H2AFXP16104 143 aaPredicted RBP13.44□□□□□ -0.26
ATM-222ENST00000533733 DNM2P50570 870 aa13.44□□□□□ -0.26
ATM-222ENST00000533733 FXR2P51116 673 aaKnown RBP eCLIP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms